RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 ZNF830Q96NB3 372 aaPredicted RBP13.27□□□□□ -0.29
PCAT1-202ENST00000561978 PHF20Q9BVI0 1012 aa13.27□□□□□ -0.29
PCAT1-202ENST00000561978 MKNK2Q9HBH9 465 aa13.27□□□□□ -0.29
PCAT1-202ENST00000561978 KCNH3Q9ULD8 1083 aa13.27□□□□□ -0.29
PCAT1-202ENST00000561978 ABT1Q9ULW3 272 aaKnown RBP13.27□□□□□ -0.29
PCAT1-202ENST00000561978 SMIM22K7EJ46 135 aa13.26□□□□□ -0.29
PCAT1-202ENST00000561978 CLSTN1O94985 981 aa13.26□□□□□ -0.29
PCAT1-202ENST00000561978 TPM2P07951 284 aa13.26□□□□□ -0.29
PCAT1-202ENST00000561978 TTLL12Q14166 644 aaPredicted RBP13.26□□□□□ -0.29
PCAT1-202ENST00000561978 NOLC1Q14978 699 aaKnown RBP eCLIP13.26□□□□□ -0.29
PCAT1-202ENST00000561978 PKN1Q16512 942 aa13.26□□□□□ -0.29
PCAT1-202ENST00000561978 ZSCAN29Q8IWY8 852 aaPredicted RBP13.26□□□□□ -0.29
PCAT1-202ENST00000561978 FAM151AQ8WW52 585 aa13.26□□□□□ -0.29
PCAT1-202ENST00000561978 CCDC34Q96HJ3 373 aa13.26□□□□□ -0.29
PCAT1-202ENST00000561978 KAT14Q9H8E8 782 aa13.26□□□□□ -0.29
PCAT1-202ENST00000561978 TCP11L1Q9NUJ3 509 aa13.26□□□□□ -0.29
PCAT1-202ENST00000561978 SRPRBQ9Y5M8 271 aaKnown RBP13.26□□□□□ -0.29
PCAT1-202ENST00000561978 PPP2R3BQ9Y5P8 575 aa13.26□□□□□ -0.29
PCAT1-202ENST00000561978 SSC5DA1L4H1 1573 aa13.26□□□□□ -0.29
PCAT1-202ENST00000561978 DDTLA6NHG4 134 aaPredicted RBP13.25□□□□□ -0.29
PCAT1-202ENST00000561978 SLURP2P0DP57 97 aa13.25□□□□□ -0.29
PCAT1-202ENST00000561978 GNAQP50148 359 aa13.25□□□□□ -0.29
PCAT1-202ENST00000561978 FAM47AQ5JRC9 791 aa13.25□□□□□ -0.29
PCAT1-202ENST00000561978 KANK3Q6NY19 840 aa13.25□□□□□ -0.29
PCAT1-202ENST00000561978 MIGA2Q7L4E1 593 aa13.25□□□□□ -0.29
PCAT1-202ENST00000561978 SH3BP5LQ7L8J4 393 aa13.25□□□□□ -0.29
PCAT1-202ENST00000561978 IFNL1Q8IU54 200 aa13.25□□□□□ -0.29
PCAT1-202ENST00000561978 ZNF444Q8N0Y2 327 aaPredicted RBP13.25□□□□□ -0.29
PCAT1-202ENST00000561978 CNNM3Q8NE01 707 aa13.25□□□□□ -0.29
PCAT1-202ENST00000561978 GBA2Q9HCG7 927 aaPredicted RBP13.25□□□□□ -0.29
PCAT1-202ENST00000561978 CABP5Q9NP86 173 aa13.25□□□□□ -0.29
PCAT1-202ENST00000561978 CLIP2Q9UDT6 1046 aa13.25□□□□□ -0.29
PCAT1-202ENST00000561978 TUBE1Q9UJT0 475 aa13.25□□□□□ -0.29
PCAT1-202ENST00000561978 ROBO3Q96MS0 1386 aa13.25□□□□□ -0.29
PCAT1-202ENST00000561978 FLT1P17948 1338 aa13.25□□□□□ -0.29
PCAT1-202ENST00000561978 TRIM75PA6NK02 468 aa13.25□□□□□ -0.29
PCAT1-202ENST00000561978 NEMFO60524 1076 aa13.25□□□□□ -0.29
PCAT1-202ENST00000561978 PLEKHA8P1O95397 391 aa13.25□□□□□ -0.29
PCAT1-202ENST00000561978 CYP2D6P10635 497 aa13.25□□□□□ -0.29
PCAT1-202ENST00000561978 NF2P35240 595 aa13.25□□□□□ -0.29
PCAT1-202ENST00000561978 TFAP4Q01664 338 aa13.25□□□□□ -0.29
PCAT1-202ENST00000561978 NR5A1Q13285 461 aa13.25□□□□□ -0.29
PCAT1-202ENST00000561978 KRBA2Q6ZNG9 492 aa13.25□□□□□ -0.29
PCAT1-202ENST00000561978 SAPCD2Q86UD0 394 aa13.25□□□□□ -0.29
PCAT1-202ENST00000561978 CNPY4Q8N129 248 aa13.25□□□□□ -0.29
PCAT1-202ENST00000561978 CLIC6Q96NY7 704 aa13.25□□□□□ -0.29
PCAT1-202ENST00000561978 FOCADQ5VW36 1801 aa13.25□□□□□ -0.29
PCAT1-202ENST00000561978 ENTPD3O75355 529 aa13.24□□□□□ -0.29
PCAT1-202ENST00000561978 DHX8Q14562 1220 aaKnown RBP13.24□□□□□ -0.29
PCAT1-202ENST00000561978 SUPT20HL1Q3ZLR7 823 aa13.24□□□□□ -0.29
PCAT1-202ENST00000561978 AOPEPQ8N6M6 819 aa13.24□□□□□ -0.29
PCAT1-202ENST00000561978 KIAA1524Q8TCG1 905 aa13.24□□□□□ -0.29
PCAT1-202ENST00000561978 CSRNP1Q96S65 589 aa13.24□□□□□ -0.29
PCAT1-202ENST00000561978 OSBPL5Q9H0X9 879 aaPredicted RBP13.24□□□□□ -0.29
PCAT1-202ENST00000561978 SPTLC3Q9NUV7 552 aa13.24□□□□□ -0.29
PCAT1-202ENST00000561978 VPS54Q9P1Q0 977 aa13.24□□□□□ -0.29
PCAT1-202ENST00000561978 SAP30BPQ9UHR5 308 aaKnown RBP13.24□□□□□ -0.29
PCAT1-202ENST00000561978 FBXO2Q9UK22 296 aaPredicted RBP13.24□□□□□ -0.29
PCAT1-202ENST00000561978 IKBKBO14920 756 aa13.23□□□□□ -0.29
PCAT1-202ENST00000561978 PYGBP11216 843 aa13.23□□□□□ -0.29
PCAT1-202ENST00000561978 HUNKP57058 714 aa13.23□□□□□ -0.29
PCAT1-202ENST00000561978 CCDC186Q7Z3E2 898 aa13.23□□□□□ -0.29
PCAT1-202ENST00000561978 SRBD1Q8N5C6 995 aaKnown RBP13.23□□□□□ -0.29
PCAT1-202ENST00000561978 C2orf69Q8N8R5 385 aa13.23□□□□□ -0.29
PCAT1-202ENST00000561978 PCDHB6Q9Y5E3 794 aa13.23□□□□□ -0.29
PCAT1-202ENST00000561978 MYH1P12882 1939 aa13.23□□□□□ -0.29
PCAT1-202ENST00000561978 RRP9O43818 475 aaKnown RBP13.23□□□□□ -0.29
PCAT1-202ENST00000561978 TSPY3P0CV98 308 aa13.23□□□□□ -0.29
PCAT1-202ENST00000561978 TSPY8P0CW00 308 aa13.23□□□□□ -0.29
PCAT1-202ENST00000561978 SCG2P13521 617 aa13.23□□□□□ -0.29
PCAT1-202ENST00000561978 CALML3P27482 149 aa13.23□□□□□ -0.29
PCAT1-202ENST00000561978 TRAPPC10P48553 1259 aa13.23□□□□□ -0.29
PCAT1-202ENST00000561978 GRM1Q13255 1194 aa13.23□□□□□ -0.29
PCAT1-202ENST00000561978 PFKFB3Q16875 520 aaPredicted RBP13.23□□□□□ -0.29
PCAT1-202ENST00000561978 DPCR1Q3MIW9 517 aa13.23□□□□□ -0.29
PCAT1-202ENST00000561978 DNTTIP2Q5QJE6 756 aaKnown RBP13.23□□□□□ -0.29
PCAT1-202ENST00000561978 RCSD1Q6JBY9 416 aa13.23□□□□□ -0.29
PCAT1-202ENST00000561978 FAM177A1Q8N128 213 aaPredicted RBP13.23□□□□□ -0.29
PCAT1-202ENST00000561978 OXER1Q8TDS5 423 aa13.23□□□□□ -0.29
PCAT1-202ENST00000561978 ERCC4Q92889 916 aaPredicted RBP13.23□□□□□ -0.29
PCAT1-202ENST00000561978 FERMT2Q96AC1 680 aa13.23□□□□□ -0.29
PCAT1-202ENST00000561978 SH3GLB2Q9NR46 395 aa13.23□□□□□ -0.29
PCAT1-202ENST00000561978 CNTNAP5Q8WYK1 1306 aa13.23□□□□□ -0.29
PCAT1-202ENST00000561978 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.22□□□□□ -0.29
PCAT1-202ENST00000561978 FAM196BA6NMK8 535 aa13.22□□□□□ -0.29
PCAT1-202ENST00000561978 PPP1R12BO60237 982 aaPredicted RBP13.22□□□□□ -0.29
PCAT1-202ENST00000561978 NMT2O60551 498 aa13.22□□□□□ -0.29
PCAT1-202ENST00000561978 PTGS1P23219 599 aa13.22□□□□□ -0.29
PCAT1-202ENST00000561978 LONRF3Q496Y0 759 aa13.22□□□□□ -0.29
PCAT1-202ENST00000561978 PNMA1Q8ND90 353 aa13.22□□□□□ -0.29
PCAT1-202ENST00000561978 LZTS2Q9BRK4 669 aa13.22□□□□□ -0.29
PCAT1-202ENST00000561978 KCNF1Q9H3M0 494 aa13.22□□□□□ -0.29
PCAT1-202ENST00000561978 METRNQ9UJH8 293 aa13.22□□□□□ -0.29
PCAT1-202ENST00000561978 TLL2Q9Y6L7 1015 aa13.22□□□□□ -0.29
PCAT1-202ENST00000561978 USP2O75604 605 aaPredicted RBP13.21□□□□□ -0.29
PCAT1-202ENST00000561978 TIE1P35590 1138 aa13.21□□□□□ -0.29
PCAT1-202ENST00000561978 NLRP5P59047 1200 aa13.21□□□□□ -0.29
PCAT1-202ENST00000561978 IMPACTQ9P2X3 320 aa13.21□□□□□ -0.29
PCAT1-202ENST00000561978 R3HCC1Q9Y3T6 440 aaKnown RBP13.21□□□□□ -0.29
PCAT1-202ENST00000561978 BIN1O00499 593 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms