RNA–Protein interactions for RNA: ENST00000561878.1

TMEM170A-202, Transcript of transmembrane protein 170A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM170A, Length 1,072 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-202ENST00000561878 RNF41Q9H4P4 317 aaPredicted RBP27.68■■■□□ 2.02
TMEM170A-202ENST00000561878 HOMER2Q9NSB8 354 aa27.68■■■□□ 2.02
TMEM170A-202ENST00000561878 TCP11L1Q9NUJ3 509 aa27.68■■■□□ 2.02
TMEM170A-202ENST00000561878 TOP1P11387 765 aaKnown RBP27.67■■■□□ 2.02
TMEM170A-202ENST00000561878 HAND2P61296 217 aa27.67■■■□□ 2.02
TMEM170A-202ENST00000561878 CCDC96Q2M329 555 aa27.67■■■□□ 2.02
TMEM170A-202ENST00000561878 AKNAD1Q5T1N1 836 aa27.67■■■□□ 2.02
TMEM170A-202ENST00000561878 MFSD6Q6ZSS7 791 aa27.67■■■□□ 2.02
TMEM170A-202ENST00000561878 FAM184BQ9ULE4 1060 aa27.67■■■□□ 2.02
TMEM170A-202ENST00000561878 MTMR7Q9Y216 660 aa27.67■■■□□ 2.02
TMEM170A-202ENST00000561878 ATP11BQ9Y2G3 1177 aa27.67■■■□□ 2.02
TMEM170A-202ENST00000561878 SUPT16HQ9Y5B9 1047 aaKnown RBP27.67■■■□□ 2.02
TMEM170A-202ENST00000561878 ADCYAP1R1P41586 468 aa27.66■■■□□ 2.02
TMEM170A-202ENST00000561878 TDHQ8IZJ6 230 aa27.66■■■□□ 2.02
TMEM170A-202ENST00000561878 LBHD1Q9BQE6 289 aaPredicted RBP27.66■■■□□ 2.02
TMEM170A-202ENST00000561878 RNF146Q9NTX7 359 aa27.66■■■□□ 2.02
TMEM170A-202ENST00000561878 ZHX1Q9UKY1 873 aaPredicted RBP27.66■■■□□ 2.02
TMEM170A-202ENST00000561878 PRR12Q9ULL5 1215 aa27.66■■■□□ 2.02
TMEM170A-202ENST00000561878 ZNF536O15090 1300 aa27.66■■■□□ 2.02
TMEM170A-202ENST00000561878 SNAI1O95863 264 aaPredicted RBP27.65■■■□□ 2.02
TMEM170A-202ENST00000561878 CWC27Q6UX04 472 aaKnown RBP27.65■■■□□ 2.02
TMEM170A-202ENST00000561878 AGBL1Q96MI9 1066 aa27.65■■■□□ 2.02
TMEM170A-202ENST00000561878 PHF24Q9UPV7 400 aa27.65■■■□□ 2.02
TMEM170A-202ENST00000561878 PGK1P00558 417 aa27.64■■■□□ 2.02
TMEM170A-202ENST00000561878 MDM2Q00987 491 aaPredicted RBP27.64■■■□□ 2.02
TMEM170A-202ENST00000561878 SNX17Q15036 470 aa27.64■■■□□ 2.02
TMEM170A-202ENST00000561878 CCDC174Q6PII3 467 aa27.64■■■□□ 2.02
TMEM170A-202ENST00000561878 FERMT2Q96AC1 680 aa27.64■■■□□ 2.02
TMEM170A-202ENST00000561878 TMEM47Q9BQJ4 181 aa27.64■■■□□ 2.02
TMEM170A-202ENST00000561878 ABHD16BQ9H3Z7 469 aa27.64■■■□□ 2.02
TMEM170A-202ENST00000561878 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.64■■■□□ 2.02
TMEM170A-202ENST00000561878 LAMA4Q16363 1823 aa27.64■■■□□ 2.01
TMEM170A-202ENST00000561878 POTEB2H3BUK9 544 aa27.63■■■□□ 2.01
TMEM170A-202ENST00000561878 ZNF213O14771 459 aa27.63■■■□□ 2.01
TMEM170A-202ENST00000561878 ALAS1P13196 640 aa27.63■■■□□ 2.01
TMEM170A-202ENST00000561878 NT5C2P49902 561 aa27.63■■■□□ 2.01
TMEM170A-202ENST00000561878 C1orf53Q5VUE5 145 aa27.63■■■□□ 2.01
TMEM170A-202ENST00000561878 RASGRP2Q7LDG7 609 aa27.63■■■□□ 2.01
TMEM170A-202ENST00000561878 TTC14Q96N46 770 aa27.63■■■□□ 2.01
TMEM170A-202ENST00000561878 TRERF1Q96PN7 1200 aa27.63■■■□□ 2.01
TMEM170A-202ENST00000561878 DNAH12Q6ZR08 3092 aa27.62■■■□□ 2.01
TMEM170A-202ENST00000561878 ACVR2BQ13705 512 aa27.62■■■□□ 2.01
TMEM170A-202ENST00000561878 ARMCX2Q7L311 632 aa27.62■■■□□ 2.01
TMEM170A-202ENST00000561878 TBC1D10CQ8IV04 446 aa27.62■■■□□ 2.01
TMEM170A-202ENST00000561878 ESR2Q92731 530 aa27.62■■■□□ 2.01
TMEM170A-202ENST00000561878 A1CFQ9NQ94 594 aaKnown RBP27.62■■■□□ 2.01
TMEM170A-202ENST00000561878 MCM3APO60318 1980 aa27.61■■■□□ 2.01
TMEM170A-202ENST00000561878 TRIM60Q495X7 471 aa27.61■■■□□ 2.01
TMEM170A-202ENST00000561878 BTNL9Q6UXG8 535 aa27.61■■■□□ 2.01
TMEM170A-202ENST00000561878 LENG1Q96BZ8 264 aaPredicted RBP27.61■■■□□ 2.01
TMEM170A-202ENST00000561878 FGD4Q96M96 766 aa27.61■■■□□ 2.01
TMEM170A-202ENST00000561878 TSEN34Q9BSV6 310 aaKnown RBP27.61■■■□□ 2.01
TMEM170A-202ENST00000561878 CCPG1Q9ULG6 757 aa27.61■■■□□ 2.01
TMEM170A-202ENST00000561878 SYNRGQ9UMZ2 1314 aa27.61■■■□□ 2.01
TMEM170A-202ENST00000561878 SOX1O00570 391 aaPredicted RBP27.6■■■□□ 2.01
TMEM170A-202ENST00000561878 ADAMTS4O75173 837 aa27.6■■■□□ 2.01
TMEM170A-202ENST00000561878 DUSP11O75319 330 aaKnown RBP27.6■■■□□ 2.01
TMEM170A-202ENST00000561878 LRIT3Q3SXY7 679 aa27.6■■■□□ 2.01
TMEM170A-202ENST00000561878 SYDE2Q5VT97 1194 aa27.6■■■□□ 2.01
TMEM170A-202ENST00000561878 FAM133AQ8N9E0 248 aa27.6■■■□□ 2.01
TMEM170A-202ENST00000561878 RANBP17Q9H2T7 1088 aaKnown RBP27.6■■■□□ 2.01
TMEM170A-202ENST00000561878 ASB14A6NK59 587 aa27.59■■■□□ 2.01
TMEM170A-202ENST00000561878 ICAM1P05362 532 aa27.59■■■□□ 2.01
TMEM170A-202ENST00000561878 SNAP25P60880 206 aa27.59■■■□□ 2.01
TMEM170A-202ENST00000561878 CNTN2Q02246 1040 aa27.59■■■□□ 2.01
TMEM170A-202ENST00000561878 CCDC144CPQ8IYA2 1237 aa27.59■■■□□ 2.01
TMEM170A-202ENST00000561878 DSCC1Q9BVC3 393 aa27.59■■■□□ 2.01
TMEM170A-202ENST00000561878 SPC25Q9HBM1 224 aa27.59■■■□□ 2.01
TMEM170A-202ENST00000561878 PRDM5Q9NQX1 630 aaPredicted RBP27.59■■■□□ 2.01
TMEM170A-202ENST00000561878 LTBP2Q14767 1821 aa27.58■■■□□ 2.01
TMEM170A-202ENST00000561878 A0A1W2PQ45 241 aaPredicted RBP27.58■■■□□ 2.01
TMEM170A-202ENST00000561878 A0A1W2PQY0 241 aa27.58■■■□□ 2.01
TMEM170A-202ENST00000561878 CCDC144BQ3MJ40 725 aa27.58■■■□□ 2.01
TMEM170A-202ENST00000561878 CCDC178Q5BJE1 867 aa27.58■■■□□ 2.01
TMEM170A-202ENST00000561878 TTBK2Q6IQ55 1244 aa27.58■■■□□ 2.01
TMEM170A-202ENST00000561878 NUP133Q8WUM0 1156 aa27.58■■■□□ 2.01
TMEM170A-202ENST00000561878 LRCH3Q96II8 777 aa27.58■■■□□ 2.01
TMEM170A-202ENST00000561878 PNMA2Q9UL42 364 aa27.58■■■□□ 2.01
TMEM170A-202ENST00000561878 NEDD4P46934 1319 aa27.58■■■□□ 2.01
TMEM170A-202ENST00000561878 FRMPD2Q68DX3 1309 aaPredicted RBP27.58■■■□□ 2.01
TMEM170A-202ENST00000561878 MOXD2PA6NHM9 499 aa27.57■■■□□ 2
TMEM170A-202ENST00000561878 PDHBP11177 359 aa27.57■■■□□ 2
TMEM170A-202ENST00000561878 SLC16A2P36021 539 aa27.57■■■□□ 2
TMEM170A-202ENST00000561878 MUM1L1Q5H9M0 696 aa27.57■■■□□ 2
TMEM170A-202ENST00000561878 GPR153Q6NV75 609 aa27.57■■■□□ 2
TMEM170A-202ENST00000561878 IQCA1Q86XH1 822 aa27.57■■■□□ 2
TMEM170A-202ENST00000561878 GPCPD1Q9NPB8 672 aa27.57■■■□□ 2
TMEM170A-202ENST00000561878 CTNNA3Q9UI47 895 aa27.57■■■□□ 2
TMEM170A-202ENST00000561878 IMMTQ16891 758 aaKnown RBP27.56■■■□□ 2
TMEM170A-202ENST00000561878 KLHDC9Q8NEP7 349 aa27.56■■■□□ 2
TMEM170A-202ENST00000561878 PDLIM7Q9NR12 457 aa27.56■■■□□ 2
TMEM170A-202ENST00000561878 CYP39A1Q9NYL5 469 aa27.56■■■□□ 2
TMEM170A-202ENST00000561878 SOWAHBA6NEL2 793 aa27.55■■■□□ 2
TMEM170A-202ENST00000561878 CST5P28325 142 aaPredicted RBP27.55■■■□□ 2
TMEM170A-202ENST00000561878 ACLYP53396 1101 aa27.55■■■□□ 2
TMEM170A-202ENST00000561878 ZNF543Q08ER8 600 aa27.55■■■□□ 2
TMEM170A-202ENST00000561878 NSMFQ6X4W1 530 aa27.55■■■□□ 2
TMEM170A-202ENST00000561878 DGKHQ86XP1 1220 aa27.55■■■□□ 2
TMEM170A-202ENST00000561878 PCSK9Q8NBP7 692 aaKnown RBP27.55■■■□□ 2
TMEM170A-202ENST00000561878 STARD7Q9NQZ5 370 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms