RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 KANSL2Q9H9L4 492 aa21.92■■□□□ 1.1
COMMD4-204ENST00000561662 SPC25Q9HBM1 224 aa21.92■■□□□ 1.1
COMMD4-204ENST00000561662 MCM3APO60318 1980 aa21.92■■□□□ 1.1
COMMD4-204ENST00000561662 RFXAPO00287 272 aa21.91■■□□□ 1.1
COMMD4-204ENST00000561662 CTAGE5O15320 804 aa21.91■■□□□ 1.1
COMMD4-204ENST00000561662 GJA9P57773 515 aa21.91■■□□□ 1.1
COMMD4-204ENST00000561662 CXCL17Q6UXB2 119 aa21.91■■□□□ 1.1
COMMD4-204ENST00000561662 C16orf86Q6ZW13 317 aa21.91■■□□□ 1.1
COMMD4-204ENST00000561662 NOL8Q76FK4 1167 aaKnown RBP21.91■■□□□ 1.1
COMMD4-204ENST00000561662 FGD4Q96M96 766 aa21.91■■□□□ 1.1
COMMD4-204ENST00000561662 UPF3AQ9H1J1 476 aaKnown RBP21.91■■□□□ 1.1
COMMD4-204ENST00000561662 TSPYL2Q9H2G4 693 aaPredicted RBP21.91■■□□□ 1.1
COMMD4-204ENST00000561662 HIPK3Q9H422 1215 aa21.91■■□□□ 1.1
COMMD4-204ENST00000561662 RAVER2Q9HCJ3 691 aaKnown RBP21.91■■□□□ 1.1
COMMD4-204ENST00000561662 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.9■■□□□ 1.1
COMMD4-204ENST00000561662 CD4P01730 458 aa21.9■■□□□ 1.1
COMMD4-204ENST00000561662 RLBP1P12271 317 aa21.9■■□□□ 1.1
COMMD4-204ENST00000561662 CEP85Q6P2H3 762 aa21.9■■□□□ 1.1
COMMD4-204ENST00000561662 ARMCX2Q7L311 632 aa21.9■■□□□ 1.1
COMMD4-204ENST00000561662 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.9■■□□□ 1.1
COMMD4-204ENST00000561662 C1QTNF1Q9BXJ1 281 aa21.9■■□□□ 1.1
COMMD4-204ENST00000561662 EPHX3Q9H6B9 360 aa21.9■■□□□ 1.1
COMMD4-204ENST00000561662 ZBBXA8MT70 800 aa21.89■■□□□ 1.09
COMMD4-204ENST00000561662 HOXD11P31277 338 aaPredicted RBP21.89■■□□□ 1.09
COMMD4-204ENST00000561662 FTSJ3Q8IY81 847 aaKnown RBP21.89■■□□□ 1.09
COMMD4-204ENST00000561662 ANKRD35Q8N283 1001 aa21.89■■□□□ 1.09
COMMD4-204ENST00000561662 TRPV6Q9H1D0 765 aa21.89■■□□□ 1.09
COMMD4-204ENST00000561662 MTIF3Q9H2K0 278 aaKnown RBP21.89■■□□□ 1.09
COMMD4-204ENST00000561662 ABHD16BQ9H3Z7 469 aa21.89■■□□□ 1.09
COMMD4-204ENST00000561662 CERS4Q9HA82 394 aa21.89■■□□□ 1.09
COMMD4-204ENST00000561662 ATP8A2Q9NTI2 1148 aa21.89■■□□□ 1.09
COMMD4-204ENST00000561662 DDX49Q9Y6V7 483 aaKnown RBP21.89■■□□□ 1.09
COMMD4-204ENST00000561662 RRP1P56182 461 aaKnown RBP21.88■■□□□ 1.09
COMMD4-204ENST00000561662 KRT40Q6A162 431 aa21.88■■□□□ 1.09
COMMD4-204ENST00000561662 AMOTL1Q8IY63 956 aa21.88■■□□□ 1.09
COMMD4-204ENST00000561662 CCDC144CPQ8IYA2 1237 aa21.88■■□□□ 1.09
COMMD4-204ENST00000561662 KIFC2Q96AC6 838 aa21.88■■□□□ 1.09
COMMD4-204ENST00000561662 HOMER2Q9NSB8 354 aa21.88■■□□□ 1.09
COMMD4-204ENST00000561662 CTDP1Q9Y5B0 961 aaPredicted RBP21.88■■□□□ 1.09
COMMD4-204ENST00000561662 ASTN1O14525 1302 aa21.87■■□□□ 1.09
COMMD4-204ENST00000561662 CNTN2Q02246 1040 aa21.87■■□□□ 1.09
COMMD4-204ENST00000561662 ZNF467Q7Z7K2 595 aaPredicted RBP21.87■■□□□ 1.09
COMMD4-204ENST00000561662 ERC1Q8IUD2 1116 aa21.87■■□□□ 1.09
COMMD4-204ENST00000561662 RHPN1Q8TCX5 695 aa21.87■■□□□ 1.09
COMMD4-204ENST00000561662 SCLYQ96I15 445 aa21.87■■□□□ 1.09
COMMD4-204ENST00000561662 LRFN3Q9BTN0 628 aa21.87■■□□□ 1.09
COMMD4-204ENST00000561662 WNT8AQ9H1J5 351 aa21.87■■□□□ 1.09
COMMD4-204ENST00000561662 SLC4A7Q9Y6M7 1214 aa21.87■■□□□ 1.09
COMMD4-204ENST00000561662 SLC4A4Q9Y6R1 1079 aa21.87■■□□□ 1.09
COMMD4-204ENST00000561662 ZBED4O75132 1171 aa21.86■■□□□ 1.09
COMMD4-204ENST00000561662 NDUFB10O96000 172 aa21.86■■□□□ 1.09
COMMD4-204ENST00000561662 ADD2P35612 726 aa21.86■■□□□ 1.09
COMMD4-204ENST00000561662 PSMC6P62333 389 aa21.86■■□□□ 1.09
COMMD4-204ENST00000561662 CTR9Q6PD62 1173 aa21.86■■□□□ 1.09
COMMD4-204ENST00000561662 NOC4LQ9BVI4 516 aaKnown RBP21.86■■□□□ 1.09
COMMD4-204ENST00000561662 KATNBL1Q9H079 304 aa21.86■■□□□ 1.09
COMMD4-204ENST00000561662 PRRC2BQ5JSZ5 2229 aaKnown RBP21.86■■□□□ 1.09
COMMD4-204ENST00000561662 GRIN2DO15399 1336 aa21.85■■□□□ 1.09
COMMD4-204ENST00000561662 F5H6K3 240 aa21.85■■□□□ 1.09
COMMD4-204ENST00000561662 TNFAIP2Q03169 654 aa21.85■■□□□ 1.09
COMMD4-204ENST00000561662 KLRC3Q07444 240 aa21.85■■□□□ 1.09
COMMD4-204ENST00000561662 ITGA7Q13683 1181 aa21.85■■□□□ 1.09
COMMD4-204ENST00000561662 BOLA2Q9H3K6 86 aa21.85■■□□□ 1.09
COMMD4-204ENST00000561662 PAG1Q9NWQ8 432 aa21.85■■□□□ 1.09
COMMD4-204ENST00000561662 B4GALT4O60513 344 aa21.84■■□□□ 1.09
COMMD4-204ENST00000561662 IFIT2P09913 472 aaKnown RBP21.84■■□□□ 1.09
COMMD4-204ENST00000561662 PRPF38AQ8NAV1 312 aaKnown RBP21.84■■□□□ 1.09
COMMD4-204ENST00000561662 SLC43A3Q8NBI5 491 aa21.84■■□□□ 1.09
COMMD4-204ENST00000561662 CHMP4CQ96CF2 233 aa21.84■■□□□ 1.09
COMMD4-204ENST00000561662 VWCEQ96DN2 955 aa21.84■■□□□ 1.09
COMMD4-204ENST00000561662 EPOPA6NHQ4 379 aa21.83■■□□□ 1.09
COMMD4-204ENST00000561662 ATP2A2P16615 1042 aaKnown RBP21.83■■□□□ 1.09
COMMD4-204ENST00000561662 TTLL4Q14679 1199 aa21.83■■□□□ 1.09
COMMD4-204ENST00000561662 FSCN1Q16658 493 aaKnown RBP21.83■■□□□ 1.09
COMMD4-204ENST00000561662 AAK1Q2M2I8 961 aa21.83■■□□□ 1.09
COMMD4-204ENST00000561662 TMEM63BQ5T3F8 832 aa21.83■■□□□ 1.09
COMMD4-204ENST00000561662 TLK2Q86UE8 772 aa21.83■■□□□ 1.09
COMMD4-204ENST00000561662 DDRGK1Q96HY6 314 aa21.83■■□□□ 1.09
COMMD4-204ENST00000561662 CLIP2Q9UDT6 1046 aa21.83■■□□□ 1.09
COMMD4-204ENST00000561662 HCN4Q9Y3Q4 1203 aa21.83■■□□□ 1.09
COMMD4-204ENST00000561662 PCDHA11Q9Y5I1 949 aa21.83■■□□□ 1.09
COMMD4-204ENST00000561662 FAM86C2PA6NEL3 165 aa21.82■■□□□ 1.08
COMMD4-204ENST00000561662 ERC2O15083 957 aa21.82■■□□□ 1.08
COMMD4-204ENST00000561662 DYNC1LI2O43237 492 aaPredicted RBP21.82■■□□□ 1.08
COMMD4-204ENST00000561662 CA3P07451 260 aa21.82■■□□□ 1.08
COMMD4-204ENST00000561662 CLASRPQ8N2M8 674 aaKnown RBP21.82■■□□□ 1.08
COMMD4-204ENST00000561662 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.82■■□□□ 1.08
COMMD4-204ENST00000561662 SLC38A10Q9HBR0 1119 aa21.82■■□□□ 1.08
COMMD4-204ENST00000561662 MTCH2Q9Y6C9 303 aa21.82■■□□□ 1.08
COMMD4-204ENST00000561662 ATP2A1O14983 1001 aa21.81■■□□□ 1.08
COMMD4-204ENST00000561662 RASA1P20936 1047 aa21.81■■□□□ 1.08
COMMD4-204ENST00000561662 EEPD1Q7L9B9 569 aa21.81■■□□□ 1.08
COMMD4-204ENST00000561662 DEFB128Q7Z7B8 93 aa21.81■■□□□ 1.08
COMMD4-204ENST00000561662 KHSRPQ92945 711 aaKnown RBP eCLIP21.81■■□□□ 1.08
COMMD4-204ENST00000561662 PUS7LQ9H0K6 701 aaKnown RBP21.81■■□□□ 1.08
COMMD4-204ENST00000561662 PDGFCQ9NRA1 345 aa21.81■■□□□ 1.08
COMMD4-204ENST00000561662 ISY1Q9ULR0 285 aaKnown RBP21.81■■□□□ 1.08
COMMD4-204ENST00000561662 SMPD1P17405 629 aa21.8■■□□□ 1.08
COMMD4-204ENST00000561662 RPUSD2Q8IZ73 545 aaKnown RBP21.8■■□□□ 1.08
COMMD4-204ENST00000561662 AP5M1Q9H0R1 490 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms