RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 ZNF277Q9NRM2 450 aaPredicted RBP18.3■□□□□ 0.52
AP4E1-205ENST00000561393 GUCA1BQ9UMX6 200 aa18.3■□□□□ 0.52
AP4E1-205ENST00000561393 GPR75-ASB3A0A0A6YYF3 556 aa18.3■□□□□ 0.52
AP4E1-205ENST00000561393 ZBTB7AO95365 584 aa18.3■□□□□ 0.52
AP4E1-205ENST00000561393 SEC23AQ15436 765 aa18.3■□□□□ 0.52
AP4E1-205ENST00000561393 DRC1Q96MC2 740 aa18.3■□□□□ 0.52
AP4E1-205ENST00000561393 PHF20Q9BVI0 1012 aa18.3■□□□□ 0.52
AP4E1-205ENST00000561393 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.3■□□□□ 0.52
AP4E1-205ENST00000561393 RNF216Q9NWF9 866 aaPredicted RBP18.3■□□□□ 0.52
AP4E1-205ENST00000561393 FBXO2Q9UK22 296 aaPredicted RBP18.3■□□□□ 0.52
AP4E1-205ENST00000561393 KDM3BQ7LBC6 1761 aa18.3■□□□□ 0.52
AP4E1-205ENST00000561393 PP2D1A8MPX8 630 aa18.29■□□□□ 0.52
AP4E1-205ENST00000561393 DDR1Q08345 913 aa18.29■□□□□ 0.52
AP4E1-205ENST00000561393 STXBP4Q6ZWJ1 553 aa18.29■□□□□ 0.52
AP4E1-205ENST00000561393 ARHGAP6O43182 974 aa18.29■□□□□ 0.52
AP4E1-205ENST00000561393 SLU7O95391 586 aaKnown RBP18.29■□□□□ 0.52
AP4E1-205ENST00000561393 CYP4A11Q02928 519 aa18.29■□□□□ 0.52
AP4E1-205ENST00000561393 FOXP4Q8IVH2 680 aaPredicted RBP18.29■□□□□ 0.52
AP4E1-205ENST00000561393 ENGASEQ8NFI3 743 aa18.29■□□□□ 0.52
AP4E1-205ENST00000561393 CCDC42Q96M95 316 aa18.29■□□□□ 0.52
AP4E1-205ENST00000561393 PARP4Q9UKK3 1724 aaKnown RBP18.29■□□□□ 0.52
AP4E1-205ENST00000561393 BMP3P12645 472 aa18.29■□□□□ 0.52
AP4E1-205ENST00000561393 UBXN2AP68543 259 aa18.29■□□□□ 0.52
AP4E1-205ENST00000561393 MAEAQ7L5Y9 396 aa18.29■□□□□ 0.52
AP4E1-205ENST00000561393 TMEM260Q9NX78 707 aa18.29■□□□□ 0.52
AP4E1-205ENST00000561393 AFDNP55196 1824 aaKnown RBP18.28■□□□□ 0.52
AP4E1-205ENST00000561393 KCNJ18B7U540 433 aa18.28■□□□□ 0.52
AP4E1-205ENST00000561393 USP8P40818 1118 aa18.28■□□□□ 0.52
AP4E1-205ENST00000561393 KCNJ12Q14500 433 aa18.28■□□□□ 0.52
AP4E1-205ENST00000561393 METTL16Q86W50 562 aaKnown RBP18.28■□□□□ 0.52
AP4E1-205ENST00000561393 FBXL16Q8N461 479 aa18.28■□□□□ 0.52
AP4E1-205ENST00000561393 DESI2Q9BSY9 194 aa18.28■□□□□ 0.52
AP4E1-205ENST00000561393 BARHL2Q9NY43 387 aa18.28■□□□□ 0.52
AP4E1-205ENST00000561393 DNM3Q9UQ16 869 aa18.28■□□□□ 0.52
AP4E1-205ENST00000561393 USP17L10C9JJH3 530 aa18.28■□□□□ 0.52
AP4E1-205ENST00000561393 MYCLP12524 364 aaPredicted RBP18.28■□□□□ 0.52
AP4E1-205ENST00000561393 ERCC5P28715 1186 aaPredicted RBP18.28■□□□□ 0.52
AP4E1-205ENST00000561393 NT5C2P49902 561 aa18.28■□□□□ 0.52
AP4E1-205ENST00000561393 PPP4CP60510 307 aa18.28■□□□□ 0.52
AP4E1-205ENST00000561393 ZNF569Q5MCW4 686 aa18.28■□□□□ 0.52
AP4E1-205ENST00000561393 TMCO3Q6UWJ1 677 aa18.28■□□□□ 0.52
AP4E1-205ENST00000561393 ZNF579Q8NAF0 562 aaKnown RBP18.28■□□□□ 0.52
AP4E1-205ENST00000561393 PICK1Q9NRD5 415 aa18.28■□□□□ 0.52
AP4E1-205ENST00000561393 FAM217BQ9NTX9 383 aaPredicted RBP18.28■□□□□ 0.52
AP4E1-205ENST00000561393 ABCC6O95255 1503 aa18.28■□□□□ 0.52
AP4E1-205ENST00000561393 TNNT3P45378 269 aaPredicted RBP18.28■□□□□ 0.52
AP4E1-205ENST00000561393 CHMP4BP1P59074 171 aa18.28■□□□□ 0.52
AP4E1-205ENST00000561393 GRIK5Q16478 980 aa18.28■□□□□ 0.52
AP4E1-205ENST00000561393 GTPBP4Q9BZE4 634 aaKnown RBP18.28■□□□□ 0.52
AP4E1-205ENST00000561393 CNTNAP5Q8WYK1 1306 aa18.28■□□□□ 0.52
AP4E1-205ENST00000561393 EEF2P13639 858 aaKnown RBP18.27■□□□□ 0.52
AP4E1-205ENST00000561393 PLCG1P19174 1290 aa18.27■□□□□ 0.52
AP4E1-205ENST00000561393 ARL6IP4Q66PJ3 421 aaKnown RBP18.27■□□□□ 0.52
AP4E1-205ENST00000561393 SH3GLB2Q9NR46 395 aa18.27■□□□□ 0.52
AP4E1-205ENST00000561393 PNMA6FA0A0J9YX94 578 aa18.27■□□□□ 0.52
AP4E1-205ENST00000561393 FOXP2O15409 715 aa18.27■□□□□ 0.52
AP4E1-205ENST00000561393 CBX1P83916 185 aa18.27■□□□□ 0.52
AP4E1-205ENST00000561393 TTBK2Q6IQ55 1244 aa18.27■□□□□ 0.52
AP4E1-205ENST00000561393 CDC42EP5Q6NZY7 148 aa18.27■□□□□ 0.52
AP4E1-205ENST00000561393 JADE2Q9NQC1 790 aa18.27■□□□□ 0.52
AP4E1-205ENST00000561393 USP17L15C9J2P7 530 aa18.27■□□□□ 0.51
AP4E1-205ENST00000561393 USP17L13C9JLJ4 530 aa18.27■□□□□ 0.51
AP4E1-205ENST00000561393 USP17L11C9JVI0 530 aa18.27■□□□□ 0.51
AP4E1-205ENST00000561393 USP17L18D6R9N7 530 aa18.27■□□□□ 0.51
AP4E1-205ENST00000561393 USP17L22D6RA61 530 aa18.27■□□□□ 0.51
AP4E1-205ENST00000561393 USP17L17D6RBQ6 530 aa18.27■□□□□ 0.51
AP4E1-205ENST00000561393 USP17L19D6RCP7 530 aa18.27■□□□□ 0.51
AP4E1-205ENST00000561393 USP17L20D6RJB6 530 aa18.27■□□□□ 0.51
AP4E1-205ENST00000561393 LAD1O00515 517 aa18.27■□□□□ 0.51
AP4E1-205ENST00000561393 USP17L24Q0WX57 530 aa18.27■□□□□ 0.51
AP4E1-205ENST00000561393 CUL4BQ13620 913 aa18.27■□□□□ 0.51
AP4E1-205ENST00000561393 IQCB1Q15051 598 aa18.27■□□□□ 0.51
AP4E1-205ENST00000561393 CDC37Q16543 378 aaPredicted RBP18.27■□□□□ 0.51
AP4E1-205ENST00000561393 CCDC144BQ3MJ40 725 aa18.27■□□□□ 0.51
AP4E1-205ENST00000561393 USP17L6PQ6QN14 398 aa18.27■□□□□ 0.51
AP4E1-205ENST00000561393 NEK11Q8NG66 645 aa18.27■□□□□ 0.51
AP4E1-205ENST00000561393 ENOX1Q8TC92 643 aaKnown RBP18.27■□□□□ 0.51
AP4E1-205ENST00000561393 OSBPL5Q9H0X9 879 aaPredicted RBP18.27■□□□□ 0.51
AP4E1-205ENST00000561393 MTMR4Q9NYA4 1195 aa18.27■□□□□ 0.51
AP4E1-205ENST00000561393 ALAS1P13196 640 aa18.27■□□□□ 0.51
AP4E1-205ENST00000561393 PPP1R2P41236 205 aa18.27■□□□□ 0.51
AP4E1-205ENST00000561393 EVX2Q03828 476 aa18.27■□□□□ 0.51
AP4E1-205ENST00000561393 DCAF17Q5H9S7 520 aaPredicted RBP18.27■□□□□ 0.51
AP4E1-205ENST00000561393 HS2ST1Q7LGA3 356 aa18.26■□□□□ 0.51
AP4E1-205ENST00000561393 ILDR1Q86SU0 546 aaPredicted RBP18.26■□□□□ 0.51
AP4E1-205ENST00000561393 VPS36Q86VN1 386 aa18.26■□□□□ 0.51
AP4E1-205ENST00000561393 TPH2Q8IWU9 490 aa18.26■□□□□ 0.51
AP4E1-205ENST00000561393 DISC1Q9NRI5 854 aa18.26■□□□□ 0.51
AP4E1-205ENST00000561393 KIAA1024Q9UPX6 916 aa18.26■□□□□ 0.51
AP4E1-205ENST00000561393 GDAQ9Y2T3 454 aa18.26■□□□□ 0.51
AP4E1-205ENST00000561393 SRGNP10124 158 aa18.26■□□□□ 0.51
AP4E1-205ENST00000561393 GPBP1Q86WP2 473 aa18.26■□□□□ 0.51
AP4E1-205ENST00000561393 NT5C3AQ9H0P0 336 aa18.26■□□□□ 0.51
AP4E1-205ENST00000561393 SALL1Q9NSC2 1324 aa18.26■□□□□ 0.51
AP4E1-205ENST00000561393 POLRMTO00411 1230 aaKnown RBP18.26■□□□□ 0.51
AP4E1-205ENST00000561393 TNFAIP1Q13829 316 aa18.26■□□□□ 0.51
AP4E1-205ENST00000561393 TMEM179Q6ZVK1 233 aa18.26■□□□□ 0.51
AP4E1-205ENST00000561393 C16orf86Q6ZW13 317 aa18.26■□□□□ 0.51
AP4E1-205ENST00000561393 DHX40Q8IX18 779 aaKnown RBP18.26■□□□□ 0.51
AP4E1-205ENST00000561393 RUFY1Q96T51 708 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms