RNA–Protein interactions for RNA: ENST00000561178.5

PPP1R3E-207, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 2

Gene PPP1R3E, Length 1,594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-207ENST00000561178 SMCO2A6NFE2 343 aa17.25■□□□□ 0.35
PPP1R3E-207ENST00000561178 PPIL2Q13356 520 aa17.25■□□□□ 0.35
PPP1R3E-207ENST00000561178 TYW1BQ6NUM6 668 aa17.25■□□□□ 0.35
PPP1R3E-207ENST00000561178 FBXO11Q86XK2 927 aa17.25■□□□□ 0.35
PPP1R3E-207ENST00000561178 PRPF38AQ8NAV1 312 aaKnown RBP17.25■□□□□ 0.35
PPP1R3E-207ENST00000561178 COA7Q96BR5 231 aa17.25■□□□□ 0.35
PPP1R3E-207ENST00000561178 OTUD5Q96G74 571 aa17.25■□□□□ 0.35
PPP1R3E-207ENST00000561178 CLMNQ96JQ2 1002 aa17.25■□□□□ 0.35
PPP1R3E-207ENST00000561178 GLT8D2Q9H1C3 349 aa17.25■□□□□ 0.35
PPP1R3E-207ENST00000561178 RANBP17Q9H2T7 1088 aaKnown RBP17.25■□□□□ 0.35
PPP1R3E-207ENST00000561178 GPBP1L1Q9HC44 474 aaPredicted RBP17.25■□□□□ 0.35
PPP1R3E-207ENST00000561178 CXCL11O14625 94 aa17.24■□□□□ 0.35
PPP1R3E-207ENST00000561178 FIBPO43427 364 aa17.24■□□□□ 0.35
PPP1R3E-207ENST00000561178 CELF2O95319 508 aaKnown RBP17.24■□□□□ 0.35
PPP1R3E-207ENST00000561178 FDX1P10109 184 aa17.24■□□□□ 0.35
PPP1R3E-207ENST00000561178 ADCY7P51828 1080 aa17.24■□□□□ 0.35
PPP1R3E-207ENST00000561178 OXER1Q8TDS5 423 aa17.24■□□□□ 0.35
PPP1R3E-207ENST00000561178 SLC10A4Q96EP9 437 aa17.24■□□□□ 0.35
PPP1R3E-207ENST00000561178 CHAMP1Q96JM3 812 aa17.24■□□□□ 0.35
PPP1R3E-207ENST00000561178 NOL7Q9UMY1 257 aaKnown RBP17.24■□□□□ 0.35
PPP1R3E-207ENST00000561178 PCDHA1Q9Y5I3 950 aa17.24■□□□□ 0.35
PPP1R3E-207ENST00000561178 SMCHD1A6NHR9 2005 aa17.24■□□□□ 0.35
PPP1R3E-207ENST00000561178 PPP1R11O60927 126 aaPredicted RBP17.23■□□□□ 0.35
PPP1R3E-207ENST00000561178 FLOT1O75955 427 aa17.23■□□□□ 0.35
PPP1R3E-207ENST00000561178 NR5A1Q13285 461 aa17.23■□□□□ 0.35
PPP1R3E-207ENST00000561178 DGKZQ13574 1117 aa17.23■□□□□ 0.35
PPP1R3E-207ENST00000561178 NPY5RQ15761 445 aa17.23■□□□□ 0.35
PPP1R3E-207ENST00000561178 RILPL1Q5EBL4 403 aa17.23■□□□□ 0.35
PPP1R3E-207ENST00000561178 SAMD1Q6SPF0 538 aaPredicted RBP17.23■□□□□ 0.35
PPP1R3E-207ENST00000561178 OPTNQ96CV9 577 aa17.23■□□□□ 0.35
PPP1R3E-207ENST00000561178 FBXO28Q9NVF7 368 aa17.23■□□□□ 0.35
PPP1R3E-207ENST00000561178 PNMA2Q9UL42 364 aa17.23■□□□□ 0.35
PPP1R3E-207ENST00000561178 CTDP1Q9Y5B0 961 aaPredicted RBP17.23■□□□□ 0.35
PPP1R3E-207ENST00000561178 USP17L15C9J2P7 530 aa17.23■□□□□ 0.35
PPP1R3E-207ENST00000561178 USP17L13C9JLJ4 530 aa17.23■□□□□ 0.35
PPP1R3E-207ENST00000561178 USP17L11C9JVI0 530 aa17.23■□□□□ 0.35
PPP1R3E-207ENST00000561178 USP17L18D6R9N7 530 aa17.23■□□□□ 0.35
PPP1R3E-207ENST00000561178 USP17L22D6RA61 530 aa17.23■□□□□ 0.35
PPP1R3E-207ENST00000561178 USP17L17D6RBQ6 530 aa17.23■□□□□ 0.35
PPP1R3E-207ENST00000561178 USP17L19D6RCP7 530 aa17.23■□□□□ 0.35
PPP1R3E-207ENST00000561178 USP17L20D6RJB6 530 aa17.23■□□□□ 0.35
PPP1R3E-207ENST00000561178 FMR1Q06787 632 aaKnown RBP eCLIP17.23■□□□□ 0.35
PPP1R3E-207ENST00000561178 USP17L24Q0WX57 530 aa17.23■□□□□ 0.35
PPP1R3E-207ENST00000561178 TMEM87AQ8NBN3 555 aa17.23■□□□□ 0.35
PPP1R3E-207ENST00000561178 PROCA1Q8NCQ7 364 aaPredicted RBP17.23■□□□□ 0.35
PPP1R3E-207ENST00000561178 CNKSR2Q8WXI2 1034 aa17.23■□□□□ 0.35
PPP1R3E-207ENST00000561178 CUL5Q93034 780 aa17.23■□□□□ 0.35
PPP1R3E-207ENST00000561178 SPATA32Q96LK8 384 aa17.23■□□□□ 0.35
PPP1R3E-207ENST00000561178 TFIP11Q9UBB9 837 aaKnown RBP17.23■□□□□ 0.35
PPP1R3E-207ENST00000561178 PPP1R9AQ9ULJ8 1098 aa17.23■□□□□ 0.35
PPP1R3E-207ENST00000561178 KCNH4Q9UQ05 1017 aa17.23■□□□□ 0.35
PPP1R3E-207ENST00000561178 A0A0G2JLL6 359 aaPredicted RBP17.22■□□□□ 0.35
PPP1R3E-207ENST00000561178 CCDC194A0A1B0GVG4 234 aa17.22■□□□□ 0.35
PPP1R3E-207ENST00000561178 IRF6O14896 467 aa17.22■□□□□ 0.35
PPP1R3E-207ENST00000561178 ZBED4O75132 1171 aa17.22■□□□□ 0.35
PPP1R3E-207ENST00000561178 ITGBL1O95965 494 aaPredicted RBP17.22■□□□□ 0.35
PPP1R3E-207ENST00000561178 MRPL12P52815 198 aaKnown RBP17.22■□□□□ 0.35
PPP1R3E-207ENST00000561178 SNAP25P60880 206 aa17.22■□□□□ 0.35
PPP1R3E-207ENST00000561178 PRRT2Q7Z6L0 340 aaPredicted RBP17.22■□□□□ 0.35
PPP1R3E-207ENST00000561178 REXO1Q8N1G1 1221 aaKnown RBP17.22■□□□□ 0.35
PPP1R3E-207ENST00000561178 TNFRSF25Q93038 417 aa17.22■□□□□ 0.35
PPP1R3E-207ENST00000561178 RIC8AQ9NPQ8 531 aa17.22■□□□□ 0.35
PPP1R3E-207ENST00000561178 MYH7BA7E2Y1 1941 aa17.22■□□□□ 0.35
PPP1R3E-207ENST00000561178 ELP1O95163 1332 aa17.22■□□□□ 0.35
PPP1R3E-207ENST00000561178 MYPNQ86TC9 1320 aa17.22■□□□□ 0.35
PPP1R3E-207ENST00000561178 A0A0G2JMZ2 1700 aa17.21■□□□□ 0.35
PPP1R3E-207ENST00000561178 PRPF40AO75400 957 aaKnown RBP17.21■□□□□ 0.35
PPP1R3E-207ENST00000561178 USH1GQ495M9 461 aa17.21■□□□□ 0.35
PPP1R3E-207ENST00000561178 CCDC174Q6PII3 467 aa17.21■□□□□ 0.35
PPP1R3E-207ENST00000561178 GADL1Q6ZQY3 521 aa17.21■□□□□ 0.35
PPP1R3E-207ENST00000561178 KRT25Q7Z3Z0 450 aa17.21■□□□□ 0.35
PPP1R3E-207ENST00000561178 TEX2Q8IWB9 1127 aa17.21■□□□□ 0.35
PPP1R3E-207ENST00000561178 USP28Q96RU2 1077 aa17.21■□□□□ 0.35
PPP1R3E-207ENST00000561178 GDPD2Q9HCC8 539 aa17.21■□□□□ 0.35
PPP1R3E-207ENST00000561178 POLR3EQ9NVU0 708 aa17.21■□□□□ 0.35
PPP1R3E-207ENST00000561178 RTEL1Q9NZ71 1219 aa17.21■□□□□ 0.35
PPP1R3E-207ENST00000561178 ABCB11O95342 1321 aa17.21■□□□□ 0.35
PPP1R3E-207ENST00000561178 COG2Q14746 738 aa17.2■□□□□ 0.34
PPP1R3E-207ENST00000561178 ANO1Q5XXA6 986 aa17.2■□□□□ 0.34
PPP1R3E-207ENST00000561178 CATSPERGQ6ZRH7 1159 aa17.2■□□□□ 0.34
PPP1R3E-207ENST00000561178 FASTKD5Q7L8L6 764 aaKnown RBP17.2■□□□□ 0.34
PPP1R3E-207ENST00000561178 LMBRD1Q9NUN5 540 aa17.2■□□□□ 0.34
PPP1R3E-207ENST00000561178 PCDHA6Q9UN73 950 aa17.2■□□□□ 0.34
PPP1R3E-207ENST00000561178 PCDHA8Q9Y5H6 950 aa17.2■□□□□ 0.34
PPP1R3E-207ENST00000561178 M0R2N6 131 aa17.19■□□□□ 0.34
PPP1R3E-207ENST00000561178 YEATS4O95619 227 aa17.19■□□□□ 0.34
PPP1R3E-207ENST00000561178 ICAM1P05362 532 aa17.19■□□□□ 0.34
PPP1R3E-207ENST00000561178 TRAPPC10P48553 1259 aa17.19■□□□□ 0.34
PPP1R3E-207ENST00000561178 CEBPZQ03701 1054 aaKnown RBP17.19■□□□□ 0.34
PPP1R3E-207ENST00000561178 PABPC4Q13310 644 aaKnown RBP eCLIP17.19■□□□□ 0.34
PPP1R3E-207ENST00000561178 NBR1Q14596 966 aa17.19■□□□□ 0.34
PPP1R3E-207ENST00000561178 STK38Q15208 465 aa17.19■□□□□ 0.34
PPP1R3E-207ENST00000561178 MCTP2Q6DN12 878 aa17.19■□□□□ 0.34
PPP1R3E-207ENST00000561178 PIK3AP1Q6ZUJ8 805 aa17.19■□□□□ 0.34
PPP1R3E-207ENST00000561178 LEO1Q8WVC0 666 aaPredicted RBP17.19■□□□□ 0.34
PPP1R3E-207ENST00000561178 PSTPIP2Q9H939 334 aa17.19■□□□□ 0.34
PPP1R3E-207ENST00000561178 SLC38A10Q9HBR0 1119 aa17.19■□□□□ 0.34
PPP1R3E-207ENST00000561178 MRPL11Q9Y3B7 192 aaKnown RBP17.19■□□□□ 0.34
PPP1R3E-207ENST00000561178 DSG3P32926 999 aa17.19■□□□□ 0.34
PPP1R3E-207ENST00000561178 NASPP49321 788 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms