RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 RNF146Q9NTX7 359 aa14.93□□□□□ -0.02
CHRNA3-208ENST00000561128 PLA2G6O60733 806 aa14.92□□□□□ -0.02
CHRNA3-208ENST00000561128 SNAI1O95863 264 aaPredicted RBP14.92□□□□□ -0.02
CHRNA3-208ENST00000561128 CYP21A2P08686 494 aa14.92□□□□□ -0.02
CHRNA3-208ENST00000561128 GOLGA8HP0CJ92 632 aa14.92□□□□□ -0.02
CHRNA3-208ENST00000561128 ZNF543Q08ER8 600 aa14.92□□□□□ -0.02
CHRNA3-208ENST00000561128 GJC2Q5T442 439 aaPredicted RBP14.92□□□□□ -0.02
CHRNA3-208ENST00000561128 TINF2Q9BSI4 451 aa14.92□□□□□ -0.02
CHRNA3-208ENST00000561128 HTATIP2Q9BUP3 242 aa14.92□□□□□ -0.02
CHRNA3-208ENST00000561128 RANBP17Q9H2T7 1088 aaKnown RBP14.92□□□□□ -0.02
CHRNA3-208ENST00000561128 SENP2Q9HC62 589 aa14.92□□□□□ -0.02
CHRNA3-208ENST00000561128 A1CFQ9NQ94 594 aaKnown RBP14.92□□□□□ -0.02
CHRNA3-208ENST00000561128 ZSWIM5Q9P217 1185 aa14.92□□□□□ -0.02
CHRNA3-208ENST00000561128 TNKSO95271 1327 aa14.92□□□□□ -0.02
CHRNA3-208ENST00000561128 SOWAHBA6NEL2 793 aa14.91□□□□□ -0.02
CHRNA3-208ENST00000561128 SEPT4O43236 478 aa14.91□□□□□ -0.02
CHRNA3-208ENST00000561128 ALAS1P13196 640 aa14.91□□□□□ -0.02
CHRNA3-208ENST00000561128 COPB2P35606 906 aa14.91□□□□□ -0.02
CHRNA3-208ENST00000561128 OAZ1P54368 228 aa14.91□□□□□ -0.02
CHRNA3-208ENST00000561128 SLC35G1Q2M3R5 365 aa14.91□□□□□ -0.02
CHRNA3-208ENST00000561128 HABP4Q5JVS0 413 aaKnown RBP14.91□□□□□ -0.02
CHRNA3-208ENST00000561128 SYDE2Q5VT97 1194 aa14.91□□□□□ -0.02
CHRNA3-208ENST00000561128 BTNL9Q6UXG8 535 aa14.91□□□□□ -0.02
CHRNA3-208ENST00000561128 CHRDL2Q6WN34 429 aa14.91□□□□□ -0.02
CHRNA3-208ENST00000561128 ESR2Q92731 530 aa14.91□□□□□ -0.02
CHRNA3-208ENST00000561128 KATNBL1Q9H079 304 aa14.91□□□□□ -0.02
CHRNA3-208ENST00000561128 PRO3102Q9H379 93 aa14.91□□□□□ -0.02
CHRNA3-208ENST00000561128 RNF41Q9H4P4 317 aaPredicted RBP14.91□□□□□ -0.02
CHRNA3-208ENST00000561128 ZMYND8Q9ULU4 1186 aaPredicted RBP14.91□□□□□ -0.02
CHRNA3-208ENST00000561128 LTBP2Q14767 1821 aa14.9□□□□□ -0.02
CHRNA3-208ENST00000561128 MYADML2A6NDP7 307 aa14.9□□□□□ -0.02
CHRNA3-208ENST00000561128 NFIBO00712 420 aa14.9□□□□□ -0.02
CHRNA3-208ENST00000561128 PCP11498 1178 aaKnown RBP14.9□□□□□ -0.02
CHRNA3-208ENST00000561128 SYN1P17600 705 aa14.9□□□□□ -0.02
CHRNA3-208ENST00000561128 SEC23AQ15436 765 aa14.9□□□□□ -0.02
CHRNA3-208ENST00000561128 IMMTQ16891 758 aaKnown RBP14.9□□□□□ -0.02
CHRNA3-208ENST00000561128 FAM133AQ8N9E0 248 aa14.9□□□□□ -0.02
CHRNA3-208ENST00000561128 CHURC1Q8WUH1 139 aa14.9□□□□□ -0.02
CHRNA3-208ENST00000561128 DIS3Q9Y2L1 958 aaKnown RBP14.9□□□□□ -0.02
CHRNA3-208ENST00000561128 EVI5O60447 810 aa14.89□□□□□ -0.03
CHRNA3-208ENST00000561128 PGK1P00558 417 aa14.89□□□□□ -0.03
CHRNA3-208ENST00000561128 ANTXR2P58335 489 aa14.89□□□□□ -0.03
CHRNA3-208ENST00000561128 PPP4R3BQ5MIZ7 849 aa14.89□□□□□ -0.03
CHRNA3-208ENST00000561128 TMEM63BQ5T3F8 832 aa14.89□□□□□ -0.03
CHRNA3-208ENST00000561128 SLC30A10Q6XR72 485 aa14.89□□□□□ -0.03
CHRNA3-208ENST00000561128 PNMA1Q8ND90 353 aa14.89□□□□□ -0.03
CHRNA3-208ENST00000561128 CHST13Q8NET6 341 aa14.89□□□□□ -0.03
CHRNA3-208ENST00000561128 DDX11Q96FC9 970 aa14.89□□□□□ -0.03
CHRNA3-208ENST00000561128 TRERF1Q96PN7 1200 aa14.89□□□□□ -0.03
CHRNA3-208ENST00000561128 ZSCAN10Q96SZ4 725 aaPredicted RBP14.89□□□□□ -0.03
CHRNA3-208ENST00000561128 UBA5Q9GZZ9 404 aa14.89□□□□□ -0.03
CHRNA3-208ENST00000561128 ACAD9Q9H845 621 aa14.89□□□□□ -0.03
CHRNA3-208ENST00000561128 RBM27Q9P2N5 1060 aaKnown RBP14.89□□□□□ -0.03
CHRNA3-208ENST00000561128 CCPG1Q9ULG6 757 aa14.89□□□□□ -0.03
CHRNA3-208ENST00000561128 CTDP1Q9Y5B0 961 aaPredicted RBP14.89□□□□□ -0.03
CHRNA3-208ENST00000561128 CEP290O15078 2479 aa14.88□□□□□ -0.03
CHRNA3-208ENST00000561128 DNM1LO00429 736 aa14.88□□□□□ -0.03
CHRNA3-208ENST00000561128 SLC34A2O95436 690 aa14.88□□□□□ -0.03
CHRNA3-208ENST00000561128 ICAM1P05362 532 aa14.88□□□□□ -0.03
CHRNA3-208ENST00000561128 ATN1P54259 1190 aaPredicted RBP14.88□□□□□ -0.03
CHRNA3-208ENST00000561128 LRRC41Q15345 812 aa14.88□□□□□ -0.03
CHRNA3-208ENST00000561128 MAMDC4Q6UXC1 1216 aa14.88□□□□□ -0.03
CHRNA3-208ENST00000561128 CENPQQ7L2Z9 268 aaPredicted RBP14.88□□□□□ -0.03
CHRNA3-208ENST00000561128 ARMCX2Q7L311 632 aa14.88□□□□□ -0.03
CHRNA3-208ENST00000561128 ANKRD35Q8N283 1001 aa14.88□□□□□ -0.03
CHRNA3-208ENST00000561128 CLEC4DQ8WXI8 215 aa14.88□□□□□ -0.03
CHRNA3-208ENST00000561128 ANKS1AQ92625 1134 aa14.88□□□□□ -0.03
CHRNA3-208ENST00000561128 LSG1Q9H089 658 aaKnown RBP14.88□□□□□ -0.03
CHRNA3-208ENST00000561128 GPHNQ9NQX3 736 aaPredicted RBP14.88□□□□□ -0.03
CHRNA3-208ENST00000561128 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.88□□□□□ -0.03
CHRNA3-208ENST00000561128 SLC5A4Q9NY91 659 aa14.88□□□□□ -0.03
CHRNA3-208ENST00000561128 CYP39A1Q9NYL5 469 aa14.88□□□□□ -0.03
CHRNA3-208ENST00000561128 ZHX1Q9UKY1 873 aaPredicted RBP14.88□□□□□ -0.03
CHRNA3-208ENST00000561128 RBM8AQ9Y5S9 174 aaKnown RBP14.88□□□□□ -0.03
CHRNA3-208ENST00000561128 SYNGAP1Q96PV0 1343 aa14.88□□□□□ -0.03
CHRNA3-208ENST00000561128 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.87□□□□□ -0.03
CHRNA3-208ENST00000561128 ADAMTS4O75173 837 aa14.87□□□□□ -0.03
CHRNA3-208ENST00000561128 MYCNP04198 464 aaPredicted RBP14.87□□□□□ -0.03
CHRNA3-208ENST00000561128 CHST3Q7LGC8 479 aa14.87□□□□□ -0.03
CHRNA3-208ENST00000561128 DGKHQ86XP1 1220 aa14.87□□□□□ -0.03
CHRNA3-208ENST00000561128 CCDC144CPQ8IYA2 1237 aa14.87□□□□□ -0.03
CHRNA3-208ENST00000561128 STAG2Q8N3U4 1231 aa14.87□□□□□ -0.03
CHRNA3-208ENST00000561128 TTC14Q96N46 770 aa14.87□□□□□ -0.03
CHRNA3-208ENST00000561128 ESYT1Q9BSJ8 1104 aa14.87□□□□□ -0.03
CHRNA3-208ENST00000561128 SENP6Q9GZR1 1112 aaPredicted RBP14.87□□□□□ -0.03
CHRNA3-208ENST00000561128 CTNNA3Q9UI47 895 aa14.87□□□□□ -0.03
CHRNA3-208ENST00000561128 SYNRGQ9UMZ2 1314 aa14.87□□□□□ -0.03
CHRNA3-208ENST00000561128 E7EWF7 191 aa14.86□□□□□ -0.03
CHRNA3-208ENST00000561128 MSCO60682 206 aa14.86□□□□□ -0.03
CHRNA3-208ENST00000561128 FDX1P10109 184 aa14.86□□□□□ -0.03
CHRNA3-208ENST00000561128 NSMFQ6X4W1 530 aa14.86□□□□□ -0.03
CHRNA3-208ENST00000561128 ZNF467Q7Z7K2 595 aaPredicted RBP14.86□□□□□ -0.03
CHRNA3-208ENST00000561128 MAP4K1Q92918 833 aa14.86□□□□□ -0.03
CHRNA3-208ENST00000561128 FERMT2Q96AC1 680 aa14.86□□□□□ -0.03
CHRNA3-208ENST00000561128 XPNPEP3Q9NQH7 507 aa14.86□□□□□ -0.03
CHRNA3-208ENST00000561128 FBXO40Q9UH90 709 aa14.86□□□□□ -0.03
CHRNA3-208ENST00000561128 POTEB2H3BUK9 544 aa14.85□□□□□ -0.03
CHRNA3-208ENST00000561128 CTAGE5O15320 804 aa14.85□□□□□ -0.03
CHRNA3-208ENST00000561128 PPP1R11O60927 126 aaPredicted RBP14.85□□□□□ -0.03
CHRNA3-208ENST00000561128 CAPN2P17655 700 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms