RNA–Protein interactions for RNA: ENST00000560944.1

CERS3-208, Transcript of ceramide synthase 3, human

TSL 3

Gene CERS3, Length 448 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CERS3-208	ENST00000560944	CALM2	P0DP24	149 aa		13.08	□□□□□ -0.32
CERS3-208	ENST00000560944	CALM3	P0DP25	149 aa		13.08	□□□□□ -0.32
CERS3-208	ENST00000560944	BCR	P11274	1271 aa		13.08	□□□□□ -0.32
CERS3-208	ENST00000560944	KIF5B	P33176	963 aa		13.08	□□□□□ -0.32
CERS3-208	ENST00000560944	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.08	□□□□□ -0.32
CERS3-208	ENST00000560944	TYW1B	Q6NUM6	668 aa		13.08	□□□□□ -0.32
CERS3-208	ENST00000560944	FAM160B2	Q86V87	743 aa		13.08	□□□□□ -0.32
CERS3-208	ENST00000560944	CHURC1	Q8WUH1	139 aa		13.08	□□□□□ -0.32
CERS3-208	ENST00000560944	MTMR8	Q96EF0	704 aa		13.08	□□□□□ -0.32
CERS3-208	ENST00000560944	MAP3K14	Q99558	947 aa		13.08	□□□□□ -0.32
CERS3-208	ENST00000560944	SPZ1	Q9BXG8	430 aa		13.08	□□□□□ -0.32
CERS3-208	ENST00000560944	RIOX1	Q9H6W3	641 aa		13.08	□□□□□ -0.32
CERS3-208	ENST00000560944	ADAMTS5	Q9UNA0	930 aa		13.08	□□□□□ -0.32
CERS3-208	ENST00000560944		V9GY48	417 aa	Predicted RBP	13.08	□□□□□ -0.32
CERS3-208	ENST00000560944	LCT	P09848	1927 aa		13.07	□□□□□ -0.32
CERS3-208	ENST00000560944	PLA2G6	O60733	806 aa		13.07	□□□□□ -0.32
CERS3-208	ENST00000560944	FDPS	P14324	419 aa	Known RBP	13.07	□□□□□ -0.32
CERS3-208	ENST00000560944	RCAN1	P53805	252 aa		13.07	□□□□□ -0.32
CERS3-208	ENST00000560944	ERVK-9	P63128	1117 aa		13.07	□□□□□ -0.32
CERS3-208	ENST00000560944	ERVK-24	P63145	666 aa		13.07	□□□□□ -0.32
CERS3-208	ENST00000560944	PKN1	Q16512	942 aa		13.07	□□□□□ -0.32
CERS3-208	ENST00000560944	MUM1L1	Q5H9M0	696 aa		13.07	□□□□□ -0.32
CERS3-208	ENST00000560944	WWC2	Q6AWC2	1192 aa		13.07	□□□□□ -0.32
CERS3-208	ENST00000560944	SNRNP48	Q6IEG0	339 aa	Known RBP	13.07	□□□□□ -0.32
CERS3-208	ENST00000560944	C17orf99	Q6UX52	265 aa		13.07	□□□□□ -0.32
CERS3-208	ENST00000560944	PRPF38A	Q8NAV1	312 aa	Known RBP	13.07	□□□□□ -0.32
CERS3-208	ENST00000560944	COA7	Q96BR5	231 aa		13.07	□□□□□ -0.32
CERS3-208	ENST00000560944	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.07	□□□□□ -0.32
CERS3-208	ENST00000560944	EFCC1	Q9HA90	598 aa		13.07	□□□□□ -0.32
CERS3-208	ENST00000560944	ZFYVE28	Q9HCC9	887 aa		13.07	□□□□□ -0.32
CERS3-208	ENST00000560944	RBM28	Q9NW13	759 aa	Known RBP	13.07	□□□□□ -0.32
CERS3-208	ENST00000560944	WBP1L	Q9NX94	342 aa		13.07	□□□□□ -0.32
CERS3-208	ENST00000560944	PNMA3	Q9UL41	463 aa		13.07	□□□□□ -0.32
CERS3-208	ENST00000560944	CCPG1	Q9ULG6	757 aa		13.07	□□□□□ -0.32
CERS3-208	ENST00000560944	DDX49	Q9Y6V7	483 aa	Known RBP	13.07	□□□□□ -0.32
CERS3-208	ENST00000560944	PLXNB2	O15031	1838 aa		13.06	□□□□□ -0.32
CERS3-208	ENST00000560944		K7ELQ4	463 aa	Predicted RBP	13.06	□□□□□ -0.32
CERS3-208	ENST00000560944	OPLAH	O14841	1288 aa		13.06	□□□□□ -0.32
CERS3-208	ENST00000560944	FOXN1	O15353	648 aa		13.06	□□□□□ -0.32
CERS3-208	ENST00000560944	TLR2	O60603	784 aa		13.06	□□□□□ -0.32
CERS3-208	ENST00000560944	IFNAR1	P17181	557 aa		13.06	□□□□□ -0.32
CERS3-208	ENST00000560944	INHBE	P58166	350 aa		13.06	□□□□□ -0.32
CERS3-208	ENST00000560944	OTUD7B	Q6GQQ9	843 aa		13.06	□□□□□ -0.32
CERS3-208	ENST00000560944	HEATR3	Q7Z4Q2	680 aa		13.06	□□□□□ -0.32
CERS3-208	ENST00000560944	SNX21	Q969T3	373 aa		13.06	□□□□□ -0.32
CERS3-208	ENST00000560944	PURB	Q96QR8	312 aa	Known RBP	13.06	□□□□□ -0.32
CERS3-208	ENST00000560944	SPATC1L	Q9H0A9	340 aa		13.06	□□□□□ -0.32
CERS3-208	ENST00000560944	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.06	□□□□□ -0.32
CERS3-208	ENST00000560944	MYPN	Q86TC9	1320 aa		13.06	□□□□□ -0.32
CERS3-208	ENST00000560944	DOCK3	Q8IZD9	2030 aa		13.05	□□□□□ -0.32
CERS3-208	ENST00000560944	NFIB	O00712	420 aa		13.05	□□□□□ -0.32
CERS3-208	ENST00000560944	CPLX1	O14810	134 aa		13.05	□□□□□ -0.32
CERS3-208	ENST00000560944	ZBED4	O75132	1171 aa		13.05	□□□□□ -0.32
CERS3-208	ENST00000560944	FMNL1	O95466	1100 aa	Predicted RBP	13.05	□□□□□ -0.32
CERS3-208	ENST00000560944	HSPA1A	P0DMV8	641 aa	Known RBP	13.05	□□□□□ -0.32
CERS3-208	ENST00000560944	HSPA1B	P0DMV9	641 aa	Known RBP	13.05	□□□□□ -0.32
CERS3-208	ENST00000560944	ALAS1	P13196	640 aa		13.05	□□□□□ -0.32
CERS3-208	ENST00000560944	HSCB	Q8IWL3	235 aa		13.05	□□□□□ -0.32
CERS3-208	ENST00000560944	CD99L2	Q8TCZ2	262 aa		13.05	□□□□□ -0.32
CERS3-208	ENST00000560944	TBC1D5	Q92609	795 aa		13.05	□□□□□ -0.32
CERS3-208	ENST00000560944	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.05	□□□□□ -0.32
CERS3-208	ENST00000560944	ZCCHC17	Q9NP64	241 aa	Known RBP	13.05	□□□□□ -0.32
CERS3-208	ENST00000560944	HOXC10	Q9NYD6	342 aa		13.05	□□□□□ -0.32
CERS3-208	ENST00000560944	VPS54	Q9P1Q0	977 aa		13.05	□□□□□ -0.32
CERS3-208	ENST00000560944	ORC3	Q9UBD5	711 aa	Predicted RBP	13.05	□□□□□ -0.32
CERS3-208	ENST00000560944	MORF4L1	Q9UBU8	362 aa		13.05	□□□□□ -0.32
CERS3-208	ENST00000560944	RABGAP1	Q9Y3P9	1069 aa		13.05	□□□□□ -0.32
CERS3-208	ENST00000560944	MGAM	O43451	1857 aa		13.05	□□□□□ -0.32
CERS3-208	ENST00000560944	STXBP3	O00186	592 aa		13.04	□□□□□ -0.32
CERS3-208	ENST00000560944	ZBTB5	O15062	677 aa		13.04	□□□□□ -0.32
CERS3-208	ENST00000560944	ICAM1	P05362	532 aa		13.04	□□□□□ -0.32
CERS3-208	ENST00000560944	ERCC3	P19447	782 aa		13.04	□□□□□ -0.32
CERS3-208	ENST00000560944	STAT3	P40763	770 aa		13.04	□□□□□ -0.32
CERS3-208	ENST00000560944	GNAQ	P50148	359 aa		13.04	□□□□□ -0.32
CERS3-208	ENST00000560944	GUCY1B3	Q02153	619 aa		13.04	□□□□□ -0.32
CERS3-208	ENST00000560944	CUL4A	Q13619	759 aa		13.04	□□□□□ -0.32
CERS3-208	ENST00000560944	WDR78	Q5VTH9	848 aa		13.04	□□□□□ -0.32
CERS3-208	ENST00000560944	SLC30A10	Q6XR72	485 aa		13.04	□□□□□ -0.32
CERS3-208	ENST00000560944	NCAPG2	Q86XI2	1143 aa		13.04	□□□□□ -0.32
CERS3-208	ENST00000560944	FBXO11	Q86XK2	927 aa		13.04	□□□□□ -0.32
CERS3-208	ENST00000560944	JMY	Q8N9B5	988 aa		13.04	□□□□□ -0.32
CERS3-208	ENST00000560944	GPRC5A	Q8NFJ5	357 aa		13.04	□□□□□ -0.32
CERS3-208	ENST00000560944	SMARCC2	Q8TAQ2	1214 aa		13.04	□□□□□ -0.32
CERS3-208	ENST00000560944	CLEC4D	Q8WXI8	215 aa		13.04	□□□□□ -0.32
CERS3-208	ENST00000560944	RRP36	Q96EU6	259 aa	Known RBP	13.04	□□□□□ -0.32
CERS3-208	ENST00000560944	LZTS2	Q9BRK4	669 aa		13.04	□□□□□ -0.32
CERS3-208	ENST00000560944	TEX13B	Q9BXU2	312 aa		13.04	□□□□□ -0.32
CERS3-208	ENST00000560944	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.04	□□□□□ -0.32
CERS3-208	ENST00000560944	RNF146	Q9NTX7	359 aa		13.04	□□□□□ -0.32
CERS3-208	ENST00000560944	RBM19	Q9Y4C8	960 aa	Known RBP	13.04	□□□□□ -0.32
CERS3-208	ENST00000560944	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.04	□□□□□ -0.32
CERS3-208	ENST00000560944	CASP8AP2	Q9UKL3	1982 aa		13.03	□□□□□ -0.32
CERS3-208	ENST00000560944	PNMA6F	A0A0J9YX94	578 aa		13.03	□□□□□ -0.32
CERS3-208	ENST00000560944	CCDC196	A0A1B0GTZ2	297 aa		13.03	□□□□□ -0.32
CERS3-208	ENST00000560944	GPR25	O00155	361 aa		13.03	□□□□□ -0.32
CERS3-208	ENST00000560944	PRPF3	O43395	683 aa	Known RBP	13.03	□□□□□ -0.32
CERS3-208	ENST00000560944	HSPA8	P11142	646 aa	Known RBP	13.03	□□□□□ -0.32
CERS3-208	ENST00000560944	SCG2	P13521	617 aa		13.03	□□□□□ -0.32
CERS3-208	ENST00000560944	GCLC	P48506	637 aa	Predicted RBP	13.03	□□□□□ -0.32
CERS3-208	ENST00000560944	SSRP1	Q08945	709 aa	Known RBP	13.03	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms