RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 SLC1A4P43007 532 aa8.2□□□□□ -1.1
CTDSPL2-210ENST00000560834 METAP2P50579 478 aaKnown RBP eCLIP8.2□□□□□ -1.1
CTDSPL2-210ENST00000560834 KIF23Q02241 960 aaPredicted RBP8.2□□□□□ -1.1
CTDSPL2-210ENST00000560834 SCRN1Q12765 414 aa8.2□□□□□ -1.1
CTDSPL2-210ENST00000560834 SREBF2Q12772 1141 aa8.2□□□□□ -1.1
CTDSPL2-210ENST00000560834 GRM1Q13255 1194 aa8.2□□□□□ -1.1
CTDSPL2-210ENST00000560834 CCDC96Q2M329 555 aa8.2□□□□□ -1.1
CTDSPL2-210ENST00000560834 GPATCH4Q5T3I0 446 aaKnown RBP8.2□□□□□ -1.1
CTDSPL2-210ENST00000560834 TTBK2Q6IQ55 1244 aa8.2□□□□□ -1.1
CTDSPL2-210ENST00000560834 TMTC3Q6ZXV5 915 aa8.2□□□□□ -1.1
CTDSPL2-210ENST00000560834 FASTKD5Q7L8L6 764 aaKnown RBP8.2□□□□□ -1.1
CTDSPL2-210ENST00000560834 ANKRD23Q86SG2 305 aa8.2□□□□□ -1.1
CTDSPL2-210ENST00000560834 CCDC144CPQ8IYA2 1237 aa8.2□□□□□ -1.1
CTDSPL2-210ENST00000560834 IL27Q8NEV9 243 aa8.2□□□□□ -1.1
CTDSPL2-210ENST00000560834 NUP133Q8WUM0 1156 aa8.2□□□□□ -1.1
CTDSPL2-210ENST00000560834 GTF3C6Q969F1 213 aa8.2□□□□□ -1.1
CTDSPL2-210ENST00000560834 ZNF274Q96GC6 653 aaPredicted RBP8.2□□□□□ -1.1
CTDSPL2-210ENST00000560834 CPVLQ9H3G5 476 aa8.2□□□□□ -1.1
CTDSPL2-210ENST00000560834 FBXO28Q9NVF7 368 aa8.2□□□□□ -1.1
CTDSPL2-210ENST00000560834 SLC45A1Q9Y2W3 748 aa8.2□□□□□ -1.1
CTDSPL2-210ENST00000560834 ADGRA2Q96PE1 1338 aa8.2□□□□□ -1.1
CTDSPL2-210ENST00000560834 PLXNB2O15031 1838 aa8.19□□□□□ -1.1
CTDSPL2-210ENST00000560834 ZNF236Q9UL36 1845 aa8.19□□□□□ -1.1
CTDSPL2-210ENST00000560834 LCTP09848 1927 aa8.19□□□□□ -1.1
CTDSPL2-210ENST00000560834 CYTH3O43739 400 aa8.19□□□□□ -1.1
CTDSPL2-210ENST00000560834 PLA2G6O60733 806 aa8.19□□□□□ -1.1
CTDSPL2-210ENST00000560834 PFKFB2O60825 505 aa8.19□□□□□ -1.1
CTDSPL2-210ENST00000560834 RGS20O76081 388 aa8.19□□□□□ -1.1
CTDSPL2-210ENST00000560834 PARP1P09874 1014 aaKnown RBP8.19□□□□□ -1.1
CTDSPL2-210ENST00000560834 TM4SF4P48230 202 aa8.19□□□□□ -1.1
CTDSPL2-210ENST00000560834 STAT2P52630 851 aa8.19□□□□□ -1.1
CTDSPL2-210ENST00000560834 FUT2Q10981 343 aa8.19□□□□□ -1.1
CTDSPL2-210ENST00000560834 STK3Q13188 491 aa8.19□□□□□ -1.1
CTDSPL2-210ENST00000560834 RTN1Q16799 776 aa8.19□□□□□ -1.1
CTDSPL2-210ENST00000560834 POTEEQ6S8J3 1075 aa8.19□□□□□ -1.1
CTDSPL2-210ENST00000560834 BTNL9Q6UXG8 535 aa8.19□□□□□ -1.1
CTDSPL2-210ENST00000560834 CATSPERGQ6ZRH7 1159 aa8.19□□□□□ -1.1
CTDSPL2-210ENST00000560834 NBPF11Q86T75 865 aa8.19□□□□□ -1.1
CTDSPL2-210ENST00000560834 CTCFLQ8NI51 663 aaPredicted RBP8.19□□□□□ -1.1
CTDSPL2-210ENST00000560834 SNX21Q969T3 373 aa8.19□□□□□ -1.1
CTDSPL2-210ENST00000560834 TANGO6Q9C0B7 1094 aa8.19□□□□□ -1.1
CTDSPL2-210ENST00000560834 NCOA5Q9HCD5 579 aaKnown RBP8.19□□□□□ -1.1
CTDSPL2-210ENST00000560834 ZCCHC17Q9NP64 241 aaKnown RBP8.19□□□□□ -1.1
CTDSPL2-210ENST00000560834 GPCPD1Q9NPB8 672 aa8.19□□□□□ -1.1
CTDSPL2-210ENST00000560834 DAXXQ9UER7 740 aaPredicted RBP8.19□□□□□ -1.1
CTDSPL2-210ENST00000560834 PPP1R9AQ9ULJ8 1098 aa8.19□□□□□ -1.1
CTDSPL2-210ENST00000560834 LIMCH1Q9UPQ0 1083 aa8.19□□□□□ -1.1
CTDSPL2-210ENST00000560834 MYPNQ86TC9 1320 aa8.19□□□□□ -1.1
CTDSPL2-210ENST00000560834 MGAMO43451 1857 aa8.19□□□□□ -1.1
CTDSPL2-210ENST00000560834 LRRC37A2A6NM11 1700 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 USP17L15C9J2P7 530 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 USP17L13C9JLJ4 530 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 TMEM232C9JQI7 657 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 USP17L11C9JVI0 530 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 KLRF2D3W0D1 207 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 USP17L18D6R9N7 530 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 USP17L22D6RA61 530 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 USP17L17D6RBQ6 530 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 USP17L19D6RCP7 530 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 USP17L20D6RJB6 530 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 PDHXO00330 501 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 TRIM66O15016 1216 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 FLOT1O75955 427 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 CTDNEP1O95476 244 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 KIF5BP33176 963 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 SLC16A2P36021 539 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 MCM2P49736 904 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 CCT2P78371 535 aaKnown RBP8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 USP17L24Q0WX57 530 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 NTRK3Q16288 839 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 TMEM92Q6UXU6 159 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 LBX2Q6XYB7 198 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 SYNE3Q6ZMZ3 975 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 FAM160B2Q86V87 743 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 CMTR1Q8N1G2 835 aaKnown RBP8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 SRBD1Q8N5C6 995 aaKnown RBP8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 NECAB1Q8N987 351 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 FANCBQ8NB91 859 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 REPS2Q8NFH8 660 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 OXER1Q8TDS5 423 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 ATG4CQ96DT6 458 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 MTMR8Q96EF0 704 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 TMX3Q96JJ7 454 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 SLF1Q9BQI6 1058 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 SPZ1Q9BXG8 430 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 UBA5Q9GZZ9 404 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 ASCC2Q9H1I8 757 aaPredicted RBP8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 SH2B1Q9NRF2 756 aaPredicted RBP8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 RBM28Q9NW13 759 aaKnown RBP8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 FEM1BQ9UK73 627 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 PRR12Q9ULL5 1215 aa8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 NAP1L2Q9ULW6 460 aaPredicted RBP8.18□□□□□ -1.1
CTDSPL2-210ENST00000560834 K7ELQ4 463 aaPredicted RBP8.17□□□□□ -1.1
CTDSPL2-210ENST00000560834 CNMDO75829 334 aa8.17□□□□□ -1.1
CTDSPL2-210ENST00000560834 CYP2C8P10632 490 aa8.17□□□□□ -1.1
CTDSPL2-210ENST00000560834 ADD1P35611 737 aaKnown RBP8.17□□□□□ -1.1
CTDSPL2-210ENST00000560834 MAP2K2P36507 400 aa8.17□□□□□ -1.1
CTDSPL2-210ENST00000560834 INHBEP58166 350 aa8.17□□□□□ -1.1
CTDSPL2-210ENST00000560834 HERVK_113P62684 666 aa8.17□□□□□ -1.1
CTDSPL2-210ENST00000560834 IRX3P78415 501 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms