RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 TFIP11Q9UBB9 837 aaKnown RBP9.88□□□□□ -0.83
TRAF3-209ENST00000560463 PNMA2Q9UL42 364 aa9.88□□□□□ -0.83
TRAF3-209ENST00000560463 PRR12Q9ULL5 1215 aa9.88□□□□□ -0.83
TRAF3-209ENST00000560463 NOL7Q9UMY1 257 aaKnown RBP9.88□□□□□ -0.83
TRAF3-209ENST00000560463 SNCAIPQ9Y6H5 919 aa9.88□□□□□ -0.83
TRAF3-209ENST00000560463 LCTP09848 1927 aa9.88□□□□□ -0.83
TRAF3-209ENST00000560463 M0R2N6 131 aa9.87□□□□□ -0.83
TRAF3-209ENST00000560463 FIBPO43427 364 aa9.87□□□□□ -0.83
TRAF3-209ENST00000560463 TRAPPC10P48553 1259 aa9.87□□□□□ -0.83
TRAF3-209ENST00000560463 NASPP49321 788 aaPredicted RBP9.87□□□□□ -0.83
TRAF3-209ENST00000560463 MRPL12P52815 198 aaKnown RBP9.87□□□□□ -0.83
TRAF3-209ENST00000560463 UBE2HP62256 183 aa9.87□□□□□ -0.83
TRAF3-209ENST00000560463 NR5A1Q13285 461 aa9.87□□□□□ -0.83
TRAF3-209ENST00000560463 PRKG1Q13976 671 aa9.87□□□□□ -0.83
TRAF3-209ENST00000560463 TTLL12Q14166 644 aaPredicted RBP9.87□□□□□ -0.83
TRAF3-209ENST00000560463 NBR1Q14596 966 aa9.87□□□□□ -0.83
TRAF3-209ENST00000560463 TYW1BQ6NUM6 668 aa9.87□□□□□ -0.83
TRAF3-209ENST00000560463 CCDC84Q86UT8 332 aaPredicted RBP9.87□□□□□ -0.83
TRAF3-209ENST00000560463 FBXO11Q86XK2 927 aa9.87□□□□□ -0.83
TRAF3-209ENST00000560463 OXER1Q8TDS5 423 aa9.87□□□□□ -0.83
TRAF3-209ENST00000560463 LEO1Q8WVC0 666 aaPredicted RBP9.87□□□□□ -0.83
TRAF3-209ENST00000560463 CUL5Q93034 780 aa9.87□□□□□ -0.83
TRAF3-209ENST00000560463 TNFRSF25Q93038 417 aa9.87□□□□□ -0.83
TRAF3-209ENST00000560463 COA7Q96BR5 231 aa9.87□□□□□ -0.83
TRAF3-209ENST00000560463 USP28Q96RU2 1077 aa9.87□□□□□ -0.83
TRAF3-209ENST00000560463 RANBP17Q9H2T7 1088 aaKnown RBP9.87□□□□□ -0.83
TRAF3-209ENST00000560463 RIC8AQ9NPQ8 531 aa9.87□□□□□ -0.83
TRAF3-209ENST00000560463 EMILIN3Q9NT22 766 aa9.87□□□□□ -0.83
TRAF3-209ENST00000560463 TMOD4Q9NZQ9 345 aa9.87□□□□□ -0.83
TRAF3-209ENST00000560463 FZD1Q9UP38 647 aa9.87□□□□□ -0.83
TRAF3-209ENST00000560463 CEP131Q9UPN4 1083 aa9.87□□□□□ -0.83
TRAF3-209ENST00000560463 PCDHA1Q9Y5I3 950 aa9.87□□□□□ -0.83
TRAF3-209ENST00000560463 MORC2Q9Y6X9 1032 aaPredicted RBP9.87□□□□□ -0.83
TRAF3-209ENST00000560463 MYH9P35579 1960 aaKnown RBP9.86□□□□□ -0.83
TRAF3-209ENST00000560463 MYPNQ86TC9 1320 aa9.86□□□□□ -0.83
TRAF3-209ENST00000560463 GOLGA6L4A6NEF3 574 aa9.86□□□□□ -0.83
TRAF3-209ENST00000560463 TRIM75PA6NK02 468 aa9.86□□□□□ -0.83
TRAF3-209ENST00000560463 CXCL11O14625 94 aa9.86□□□□□ -0.83
TRAF3-209ENST00000560463 TRAK2O60296 914 aa9.86□□□□□ -0.83
TRAF3-209ENST00000560463 BMP15O95972 392 aa9.86□□□□□ -0.83
TRAF3-209ENST00000560463 POTEIP0CG38 1075 aa9.86□□□□□ -0.83
TRAF3-209ENST00000560463 POTEJP0CG39 1038 aa9.86□□□□□ -0.83
TRAF3-209ENST00000560463 VCAM1P19320 739 aa9.86□□□□□ -0.83
TRAF3-209ENST00000560463 ADCY7P51828 1080 aa9.86□□□□□ -0.83
TRAF3-209ENST00000560463 KLHL40Q2TBA0 621 aa9.86□□□□□ -0.83
TRAF3-209ENST00000560463 LDLRAD1Q5T700 205 aa9.86□□□□□ -0.83
TRAF3-209ENST00000560463 ANO1Q5XXA6 986 aa9.86□□□□□ -0.83
TRAF3-209ENST00000560463 MAP1SQ66K74 1059 aaPredicted RBP9.86□□□□□ -0.83
TRAF3-209ENST00000560463 DLK2Q6UY11 383 aa9.86□□□□□ -0.83
TRAF3-209ENST00000560463 KRT25Q7Z3Z0 450 aa9.86□□□□□ -0.83
TRAF3-209ENST00000560463 REXO1Q8N1G1 1221 aaKnown RBP9.86□□□□□ -0.83
TRAF3-209ENST00000560463 JMYQ8N9B5 988 aa9.86□□□□□ -0.83
TRAF3-209ENST00000560463 KCNG4Q8TDN1 519 aa9.86□□□□□ -0.83
TRAF3-209ENST00000560463 KIFC2Q96AC6 838 aa9.86□□□□□ -0.83
TRAF3-209ENST00000560463 CHAMP1Q96JM3 812 aa9.86□□□□□ -0.83
TRAF3-209ENST00000560463 SLF1Q9BQI6 1058 aa9.86□□□□□ -0.83
TRAF3-209ENST00000560463 GDPD2Q9HCC8 539 aa9.86□□□□□ -0.83
TRAF3-209ENST00000560463 PCDHA6Q9UN73 950 aa9.86□□□□□ -0.83
TRAF3-209ENST00000560463 PCDHA8Q9Y5H6 950 aa9.86□□□□□ -0.83
TRAF3-209ENST00000560463 DDX49Q9Y6V7 483 aaKnown RBP9.86□□□□□ -0.83
TRAF3-209ENST00000560463 PLXNB2O15031 1838 aa9.86□□□□□ -0.83
TRAF3-209ENST00000560463 ABCB11O95342 1321 aa9.85□□□□□ -0.83
TRAF3-209ENST00000560463 CCDC194A0A1B0GVG4 234 aa9.85□□□□□ -0.83
TRAF3-209ENST00000560463 SPDYE5A6NIY4 337 aa9.85□□□□□ -0.83
TRAF3-209ENST00000560463 SPTLC2O15270 562 aa9.85□□□□□ -0.83
TRAF3-209ENST00000560463 PPP1R11O60927 126 aaPredicted RBP9.85□□□□□ -0.83
TRAF3-209ENST00000560463 PPP6R2O75170 966 aa9.85□□□□□ -0.83
TRAF3-209ENST00000560463 HMGCS2P54868 508 aa9.85□□□□□ -0.83
TRAF3-209ENST00000560463 PPIL2Q13356 520 aa9.85□□□□□ -0.83
TRAF3-209ENST00000560463 ORC2Q13416 577 aaPredicted RBP9.85□□□□□ -0.83
TRAF3-209ENST00000560463 SLC39A14Q15043 492 aa9.85□□□□□ -0.83
TRAF3-209ENST00000560463 STK38Q15208 465 aa9.85□□□□□ -0.83
TRAF3-209ENST00000560463 SAMD3Q8N6K7 520 aa9.85□□□□□ -0.83
TRAF3-209ENST00000560463 LINC00301Q8NCQ3 95 aa9.85□□□□□ -0.83
TRAF3-209ENST00000560463 PROCA1Q8NCQ7 364 aaPredicted RBP9.85□□□□□ -0.83
TRAF3-209ENST00000560463 TANGO6Q9C0B7 1094 aa9.85□□□□□ -0.83
TRAF3-209ENST00000560463 RPAP3Q9H6T3 665 aaPredicted RBP9.85□□□□□ -0.83
TRAF3-209ENST00000560463 PSTPIP2Q9H939 334 aa9.85□□□□□ -0.83
TRAF3-209ENST00000560463 ELP3Q9H9T3 547 aa9.85□□□□□ -0.83
TRAF3-209ENST00000560463 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.85□□□□□ -0.83
TRAF3-209ENST00000560463 PPP1R9AQ9ULJ8 1098 aa9.85□□□□□ -0.83
TRAF3-209ENST00000560463 KCNH4Q9UQ05 1017 aa9.85□□□□□ -0.83
TRAF3-209ENST00000560463 MGAMO43451 1857 aa9.85□□□□□ -0.83
TRAF3-209ENST00000560463 MYH11P35749 1972 aa9.84□□□□□ -0.83
TRAF3-209ENST00000560463 A0A0G2JLL6 359 aaPredicted RBP9.84□□□□□ -0.83
TRAF3-209ENST00000560463 USP17L15C9J2P7 530 aa9.84□□□□□ -0.83
TRAF3-209ENST00000560463 USP17L13C9JLJ4 530 aa9.84□□□□□ -0.83
TRAF3-209ENST00000560463 USP17L11C9JVI0 530 aa9.84□□□□□ -0.83
TRAF3-209ENST00000560463 USP17L18D6R9N7 530 aa9.84□□□□□ -0.83
TRAF3-209ENST00000560463 USP17L22D6RA61 530 aa9.84□□□□□ -0.83
TRAF3-209ENST00000560463 USP17L17D6RBQ6 530 aa9.84□□□□□ -0.83
TRAF3-209ENST00000560463 USP17L19D6RCP7 530 aa9.84□□□□□ -0.83
TRAF3-209ENST00000560463 USP17L20D6RJB6 530 aa9.84□□□□□ -0.83
TRAF3-209ENST00000560463 ZBED4O75132 1171 aa9.84□□□□□ -0.83
TRAF3-209ENST00000560463 FLOT1O75955 427 aa9.84□□□□□ -0.83
TRAF3-209ENST00000560463 FOSP01100 380 aaPredicted RBP9.84□□□□□ -0.83
TRAF3-209ENST00000560463 ICAM1P05362 532 aa9.84□□□□□ -0.83
TRAF3-209ENST00000560463 CLK2P49760 499 aaKnown RBP9.84□□□□□ -0.83
TRAF3-209ENST00000560463 TOB1P50616 345 aaPredicted RBP9.84□□□□□ -0.83
TRAF3-209ENST00000560463 CEBPZQ03701 1054 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms