RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 SSH2Q76I76 1423 aa14.83□□□□□ -0.04
TRAF3-208ENST00000560371 SND1Q7KZF4 910 aaKnown RBP eCLIP14.83□□□□□ -0.04
TRAF3-208ENST00000560371 TRIM31Q9BZY9 425 aa14.83□□□□□ -0.04
TRAF3-208ENST00000560371 HSPA1LP34931 641 aa14.83□□□□□ -0.04
TRAF3-208ENST00000560371 SESTD1Q86VW0 696 aa14.83□□□□□ -0.04
TRAF3-208ENST00000560371 TRMT44Q8IYL2 757 aaKnown RBP14.83□□□□□ -0.04
TRAF3-208ENST00000560371 VPS52Q8N1B4 723 aa14.83□□□□□ -0.04
TRAF3-208ENST00000560371 CCDC127Q96BQ5 260 aa14.83□□□□□ -0.04
TRAF3-208ENST00000560371 PALLDQ8WX93 1383 aa14.82□□□□□ -0.04
TRAF3-208ENST00000560371 BTBD18B2RXH4 712 aa14.82□□□□□ -0.04
TRAF3-208ENST00000560371 CEP104O60308 925 aa14.82□□□□□ -0.04
TRAF3-208ENST00000560371 RABGAP1Q9Y3P9 1069 aa14.82□□□□□ -0.04
TRAF3-208ENST00000560371 CAPN2P17655 700 aa14.82□□□□□ -0.04
TRAF3-208ENST00000560371 IFRD2Q12894 506 aaPredicted RBP14.82□□□□□ -0.04
TRAF3-208ENST00000560371 GPIHBP1Q8IV16 184 aa14.82□□□□□ -0.04
TRAF3-208ENST00000560371 ZFP91Q96JP5 570 aaPredicted RBP14.82□□□□□ -0.04
TRAF3-208ENST00000560371 PSMB7Q99436 277 aa14.82□□□□□ -0.04
TRAF3-208ENST00000560371 SAMD15Q9P1V8 674 aa14.82□□□□□ -0.04
TRAF3-208ENST00000560371 ERVK-7P63135 1459 aa14.82□□□□□ -0.04
TRAF3-208ENST00000560371 N4BP1O75113 896 aaKnown RBP14.82□□□□□ -0.04
TRAF3-208ENST00000560371 IFT20Q8IY31 132 aa14.82□□□□□ -0.04
TRAF3-208ENST00000560371 ATP6V0A1Q93050 837 aa14.82□□□□□ -0.04
TRAF3-208ENST00000560371 SLC10A4Q96EP9 437 aa14.82□□□□□ -0.04
TRAF3-208ENST00000560371 SETDB1Q15047 1291 aa14.82□□□□□ -0.04
TRAF3-208ENST00000560371 RPS6KA1Q15418 735 aa14.82□□□□□ -0.04
TRAF3-208ENST00000560371 TYW1BQ6NUM6 668 aa14.82□□□□□ -0.04
TRAF3-208ENST00000560371 CCDC105Q8IYK2 499 aa14.82□□□□□ -0.04
TRAF3-208ENST00000560371 RETREG2Q8NC44 543 aa14.82□□□□□ -0.04
TRAF3-208ENST00000560371 SLC7A3Q8WY07 619 aa14.82□□□□□ -0.04
TRAF3-208ENST00000560371 JPH2Q9BR39 696 aaPredicted RBP14.82□□□□□ -0.04
TRAF3-208ENST00000560371 IFIH1Q9BYX4 1025 aaKnown RBP14.82□□□□□ -0.04
TRAF3-208ENST00000560371 ADCY9O60503 1353 aa14.82□□□□□ -0.04
TRAF3-208ENST00000560371 CIAPIN1Q6FI81 312 aa14.82□□□□□ -0.04
TRAF3-208ENST00000560371 IQCDQ96DY2 449 aa14.82□□□□□ -0.04
TRAF3-208ENST00000560371 ZNF577Q9BSK1 485 aa14.82□□□□□ -0.04
TRAF3-208ENST00000560371 TUBB2AQ13885 445 aa14.82□□□□□ -0.04
TRAF3-208ENST00000560371 HDXQ7Z353 690 aa14.82□□□□□ -0.04
TRAF3-208ENST00000560371 TUBB2BQ9BVA1 445 aa14.82□□□□□ -0.04
TRAF3-208ENST00000560371 MIS12Q9H081 205 aa14.82□□□□□ -0.04
TRAF3-208ENST00000560371 ZSWIM6Q9HCJ5 1215 aa14.82□□□□□ -0.04
TRAF3-208ENST00000560371 GPR108Q9NPR9 543 aa14.82□□□□□ -0.04
TRAF3-208ENST00000560371 GOLGA6CA6NDK9 693 aa14.81□□□□□ -0.04
TRAF3-208ENST00000560371 GOLGA6BA6NDN3 693 aa14.81□□□□□ -0.04
TRAF3-208ENST00000560371 GOLGA6DP0CG33 693 aa14.81□□□□□ -0.04
TRAF3-208ENST00000560371 BMP3P12645 472 aa14.81□□□□□ -0.04
TRAF3-208ENST00000560371 KRT81Q14533 505 aa14.81□□□□□ -0.04
TRAF3-208ENST00000560371 Q3C1V9 767 aa14.81□□□□□ -0.04
TRAF3-208ENST00000560371 CDHR1Q96JP9 859 aa14.81□□□□□ -0.04
TRAF3-208ENST00000560371 GOLGA6AQ9NYA3 693 aa14.81□□□□□ -0.04
TRAF3-208ENST00000560371 NUB1Q9Y5A7 615 aa14.81□□□□□ -0.04
TRAF3-208ENST00000560371 TET3O43151 1660 aa14.81□□□□□ -0.04
TRAF3-208ENST00000560371 XPOTO43592 962 aaKnown RBP14.81□□□□□ -0.04
TRAF3-208ENST00000560371 EVCP57679 992 aa14.81□□□□□ -0.04
TRAF3-208ENST00000560371 SRGAP1Q7Z6B7 1085 aa14.81□□□□□ -0.04
TRAF3-208ENST00000560371 KIAA1468Q9P260 1216 aa14.81□□□□□ -0.04
TRAF3-208ENST00000560371 SRP68Q9UHB9 627 aaKnown RBP14.81□□□□□ -0.04
TRAF3-208ENST00000560371 OATP04181 439 aa14.81□□□□□ -0.04
TRAF3-208ENST00000560371 GBP6Q6ZN66 633 aa14.81□□□□□ -0.04
TRAF3-208ENST00000560371 EXOC8Q8IYI6 725 aa14.81□□□□□ -0.04
TRAF3-208ENST00000560371 LSM14BQ9BX40 385 aaKnown RBP14.81□□□□□ -0.04
TRAF3-208ENST00000560371 SCYL2Q6P3W7 929 aa14.81□□□□□ -0.04
TRAF3-208ENST00000560371 AFAP1L2Q8N4X5 818 aa14.81□□□□□ -0.04
TRAF3-208ENST00000560371 CCDC110Q8TBZ0 833 aa14.81□□□□□ -0.04
TRAF3-208ENST00000560371 VPS18Q9P253 973 aa14.81□□□□□ -0.04
TRAF3-208ENST00000560371 MAGI3Q5TCQ9 1506 aa14.81□□□□□ -0.04
TRAF3-208ENST00000560371 CCDC160A6NGH7 325 aa14.81□□□□□ -0.04
TRAF3-208ENST00000560371 LGSNQ5TDP6 509 aa14.81□□□□□ -0.04
TRAF3-208ENST00000560371 FAM184BQ9ULE4 1060 aa14.81□□□□□ -0.04
TRAF3-208ENST00000560371 KIAA1024Q9UPX6 916 aa14.81□□□□□ -0.04
TRAF3-208ENST00000560371 AFG3L2Q9Y4W6 797 aa14.81□□□□□ -0.04
TRAF3-208ENST00000560371 MAP3K4Q9Y6R4 1608 aa14.81□□□□□ -0.04
TRAF3-208ENST00000560371 GDF11O95390 407 aa14.81□□□□□ -0.04
TRAF3-208ENST00000560371 PPP2R5AQ15172 486 aa14.81□□□□□ -0.04
TRAF3-208ENST00000560371 ATG3Q9NT62 314 aa14.81□□□□□ -0.04
TRAF3-208ENST00000560371 PIM2Q9P1W9 311 aa14.81□□□□□ -0.04
TRAF3-208ENST00000560371 PFKFB2O60825 505 aa14.8□□□□□ -0.04
TRAF3-208ENST00000560371 SLC12A2P55011 1212 aa14.8□□□□□ -0.04
TRAF3-208ENST00000560371 MTX1Q13505 466 aa14.8□□□□□ -0.04
TRAF3-208ENST00000560371 TFDP1Q14186 410 aa14.8□□□□□ -0.04
TRAF3-208ENST00000560371 ODR4Q5SWX8 454 aa14.8□□□□□ -0.04
TRAF3-208ENST00000560371 CCDC121Q6ZUS5 278 aa14.8□□□□□ -0.04
TRAF3-208ENST00000560371 APOL6Q9BWW8 343 aa14.8□□□□□ -0.04
TRAF3-208ENST00000560371 VIMP08670 466 aaKnown RBP14.8□□□□□ -0.04
TRAF3-208ENST00000560371 CFAP221Q4G0U5 840 aa14.8□□□□□ -0.04
TRAF3-208ENST00000560371 MIGA2Q7L4E1 593 aa14.8□□□□□ -0.04
TRAF3-208ENST00000560371 EBAG9O00559 213 aa14.8□□□□□ -0.04
TRAF3-208ENST00000560371 ARHGAP6O43182 974 aa14.8□□□□□ -0.04
TRAF3-208ENST00000560371 ABCB4P21439 1286 aa14.8□□□□□ -0.04
TRAF3-208ENST00000560371 TRIM50Q86XT4 487 aa14.8□□□□□ -0.04
TRAF3-208ENST00000560371 PPM1KQ8N3J5 372 aa14.8□□□□□ -0.04
TRAF3-208ENST00000560371 RSPH14Q9UHP6 348 aa14.8□□□□□ -0.04
TRAF3-208ENST00000560371 INO80B-WBP1J3KQ70 363 aa14.8□□□□□ -0.04
TRAF3-208ENST00000560371 TLR3O15455 904 aaKnown RBP14.8□□□□□ -0.04
TRAF3-208ENST00000560371 DYNLL1P63167 89 aaKnown RBP14.8□□□□□ -0.04
TRAF3-208ENST00000560371 LACTBP83111 547 aaPredicted RBP14.8□□□□□ -0.04
TRAF3-208ENST00000560371 BSPRYQ5W0U4 402 aa14.8□□□□□ -0.04
TRAF3-208ENST00000560371 CLEC4GQ6UXB4 293 aa14.8□□□□□ -0.04
TRAF3-208ENST00000560371 RSAD2Q8WXG1 361 aa14.8□□□□□ -0.04
TRAF3-208ENST00000560371 MASTLQ96GX5 879 aa14.8□□□□□ -0.04
TRAF3-208ENST00000560371 INO80BQ9C086 356 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms