RNA–Protein interactions for RNA: ENST00000560357.5

HMBOX1-214, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 979 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-214ENST00000560357 CHURC1Q8WUH1 139 aa8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 LPAR1Q92633 364 aa8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 GPKOWQ92917 476 aaPredicted RBP eCLIP8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 CLMNQ96JQ2 1002 aa8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 GBP4Q96PP9 640 aa8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 BARHL2Q9NY43 387 aa8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 SEC63Q9UGP8 760 aaKnown RBP8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 ISY1Q9ULR0 285 aaKnown RBP8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 ATP6V1DQ9Y5K8 247 aa8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 CSADQ9Y600 493 aa8.35□□□□□ -1.07
HMBOX1-214ENST00000560357 UNCXA6NJT0 531 aa8.34□□□□□ -1.07
HMBOX1-214ENST00000560357 TRIM75PA6NK02 468 aa8.34□□□□□ -1.07
HMBOX1-214ENST00000560357 BTBD18B2RXH4 712 aa8.34□□□□□ -1.07
HMBOX1-214ENST00000560357 KIF28PB7ZC32 967 aa8.34□□□□□ -1.07
HMBOX1-214ENST00000560357 STXBP3O00186 592 aa8.34□□□□□ -1.07
HMBOX1-214ENST00000560357 RIOK3O14730 519 aaKnown RBP8.34□□□□□ -1.07
HMBOX1-214ENST00000560357 ZBTB5O15062 677 aa8.34□□□□□ -1.07
HMBOX1-214ENST00000560357 WDR46O15213 610 aaKnown RBP8.34□□□□□ -1.07
HMBOX1-214ENST00000560357 PPP1R11O60927 126 aaPredicted RBP8.34□□□□□ -1.07
HMBOX1-214ENST00000560357 ITGBL1O95965 494 aaPredicted RBP8.34□□□□□ -1.07
HMBOX1-214ENST00000560357 STAT2P52630 851 aa8.34□□□□□ -1.07
HMBOX1-214ENST00000560357 USP14P54578 494 aa8.34□□□□□ -1.07
HMBOX1-214ENST00000560357 NLRP5P59047 1200 aa8.34□□□□□ -1.07
HMBOX1-214ENST00000560357 DNM1Q05193 864 aaKnown RBP8.34□□□□□ -1.07
HMBOX1-214ENST00000560357 DGKZQ13574 1117 aa8.34□□□□□ -1.07
HMBOX1-214ENST00000560357 SAFBQ15424 915 aaKnown RBP eCLIP8.34□□□□□ -1.07
HMBOX1-214ENST00000560357 FOXD4L6Q3SYB3 417 aaPredicted RBP8.34□□□□□ -1.07
HMBOX1-214ENST00000560357 SH3D19Q5HYK7 790 aa8.34□□□□□ -1.07
HMBOX1-214ENST00000560357 FOXD4L3Q6VB84 417 aaPredicted RBP8.34□□□□□ -1.07
HMBOX1-214ENST00000560357 HEATR3Q7Z4Q2 680 aa8.34□□□□□ -1.07
HMBOX1-214ENST00000560357 FAM160B2Q86V87 743 aa8.34□□□□□ -1.07
HMBOX1-214ENST00000560357 ERO1BQ86YB8 467 aa8.34□□□□□ -1.07
HMBOX1-214ENST00000560357 DIS3L2Q8IYB7 885 aaKnown RBP8.34□□□□□ -1.07
HMBOX1-214ENST00000560357 FAM177A1Q8N128 213 aaPredicted RBP8.34□□□□□ -1.07
HMBOX1-214ENST00000560357 OXER1Q8TDS5 423 aa8.34□□□□□ -1.07
HMBOX1-214ENST00000560357 C12orf42Q96LP6 360 aa8.34□□□□□ -1.07
HMBOX1-214ENST00000560357 ELP3Q9H9T3 547 aa8.34□□□□□ -1.07
HMBOX1-214ENST00000560357 FEM1BQ9UK73 627 aa8.34□□□□□ -1.07
HMBOX1-214ENST00000560357 PRR12Q9ULL5 1215 aa8.34□□□□□ -1.07
HMBOX1-214ENST00000560357 PTPRFP10586 1907 aa8.33□□□□□ -1.08
HMBOX1-214ENST00000560357 SPDYE5A6NIY4 337 aa8.33□□□□□ -1.08
HMBOX1-214ENST00000560357 hCG_1984214I3L0E3 225 aa8.33□□□□□ -1.08
HMBOX1-214ENST00000560357 VCAM1P19320 739 aa8.33□□□□□ -1.08
HMBOX1-214ENST00000560357 CALML3P27482 149 aa8.33□□□□□ -1.08
HMBOX1-214ENST00000560357 KRT2P35908 639 aa8.33□□□□□ -1.08
HMBOX1-214ENST00000560357 HMGCS2P54868 508 aa8.33□□□□□ -1.08
HMBOX1-214ENST00000560357 SNAP25P60880 206 aa8.33□□□□□ -1.08
HMBOX1-214ENST00000560357 FKBP1BP68106 108 aa8.33□□□□□ -1.08
HMBOX1-214ENST00000560357 PPATQ06203 517 aa8.33□□□□□ -1.08
HMBOX1-214ENST00000560357 IKQ13123 557 aaPredicted RBP8.33□□□□□ -1.08
HMBOX1-214ENST00000560357 CDC37Q16543 378 aaPredicted RBP8.33□□□□□ -1.08
HMBOX1-214ENST00000560357 QRICH1Q2TAL8 776 aa8.33□□□□□ -1.08
HMBOX1-214ENST00000560357 BRAPQ7Z569 592 aa8.33□□□□□ -1.08
HMBOX1-214ENST00000560357 ZNF713Q8N859 430 aaPredicted RBP8.33□□□□□ -1.08
HMBOX1-214ENST00000560357 RBM46Q8TBY0 533 aaKnown RBP8.33□□□□□ -1.08
HMBOX1-214ENST00000560357 TNFRSF25Q93038 417 aa8.33□□□□□ -1.08
HMBOX1-214ENST00000560357 COA7Q96BR5 231 aa8.33□□□□□ -1.08
HMBOX1-214ENST00000560357 ZMYND12Q9H0C1 365 aa8.33□□□□□ -1.08
HMBOX1-214ENST00000560357 FOXP1Q9H334 677 aaPredicted RBP8.33□□□□□ -1.08
HMBOX1-214ENST00000560357 ZNF408Q9H9D4 720 aa8.33□□□□□ -1.08
HMBOX1-214ENST00000560357 FBXO28Q9NVF7 368 aa8.33□□□□□ -1.08
HMBOX1-214ENST00000560357 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.33□□□□□ -1.08
HMBOX1-214ENST00000560357 MYH15Q9Y2K3 1946 aa8.33□□□□□ -1.08
HMBOX1-214ENST00000560357 ESYT2A0FGR8 921 aa8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 M0R2N6 131 aa8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 CXCL11O14625 94 aa8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 IRF6O14896 467 aa8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 ADAMTS3O15072 1205 aa8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 CELF2O95319 508 aaKnown RBP8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 NAPAP54920 295 aa8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 NR5A1Q13285 461 aa8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 PPIL2Q13356 520 aa8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 GNL2Q13823 731 aaKnown RBP8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 MYSM1Q5VVJ2 828 aa8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 CST9Q5W186 159 aa8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 ATL3Q6DD88 541 aa8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 GALNT17Q6IS24 598 aa8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 NOSTRINQ8IVI9 506 aa8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 BLIDQ8IZY5 108 aa8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 PRPF38AQ8NAV1 312 aaKnown RBP8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 DAGLBQ8NCG7 672 aa8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 CCDC148Q8NFR7 591 aa8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 CCDC12Q8WUD4 166 aaPredicted RBP8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 KIFC2Q96AC6 838 aa8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 RNF25Q96BH1 459 aaPredicted RBP8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 SLC10A4Q96EP9 437 aa8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 ZNF396Q96N95 335 aaPredicted RBP8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 TMEM121BQ9BXQ6 578 aaPredicted RBP8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 RANBP17Q9H2T7 1088 aaKnown RBP8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 RPAP3Q9H6T3 665 aaPredicted RBP8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 GBA2Q9HCG7 927 aaPredicted RBP8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 BRMS1Q9HCU9 246 aa8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 TMOD4Q9NZQ9 345 aa8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 TFIP11Q9UBB9 837 aaKnown RBP8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 PCDHA4Q9UN74 947 aa8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 KCNH4Q9UQ05 1017 aa8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 CNPY2Q9Y2B0 182 aa8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 SMCHD1A6NHR9 2005 aa8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 TRPM7Q96QT4 1865 aa8.32□□□□□ -1.08
HMBOX1-214ENST00000560357 PARP14Q460N5 1801 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms