RNA–Protein interactions for RNA: ENST00000560336.6

LINC00520-206, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 883 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-206ENST00000560336 ZBTB38Q8NAP3 1195 aaPredicted RBP9.53□□□□□ -0.88
LINC00520-206ENST00000560336 KLHL23Q8NBE8 558 aa9.53□□□□□ -0.88
LINC00520-206ENST00000560336 TP53INP1Q96A56 240 aa9.53□□□□□ -0.88
LINC00520-206ENST00000560336 KLHDC7BQ96G42 594 aa9.53□□□□□ -0.88
LINC00520-206ENST00000560336 TRAIPQ9BWF2 469 aa9.53□□□□□ -0.88
LINC00520-206ENST00000560336 BHLHE41Q9C0J9 482 aaPredicted RBP9.53□□□□□ -0.88
LINC00520-206ENST00000560336 TRMT112Q9UI30 125 aaKnown RBP9.53□□□□□ -0.88
LINC00520-206ENST00000560336 CDHR2Q9BYE9 1310 aa9.53□□□□□ -0.88
LINC00520-206ENST00000560336 METTL12A8MUP2 240 aa9.52□□□□□ -0.89
LINC00520-206ENST00000560336 DDX3YO15523 660 aaKnown RBP9.52□□□□□ -0.89
LINC00520-206ENST00000560336 CPNE3O75131 537 aaKnown RBP9.52□□□□□ -0.89
LINC00520-206ENST00000560336 CDC45O75419 566 aa9.52□□□□□ -0.89
LINC00520-206ENST00000560336 TRIM37O94972 964 aa9.52□□□□□ -0.89
LINC00520-206ENST00000560336 CAMTA2O94983 1202 aa9.52□□□□□ -0.89
LINC00520-206ENST00000560336 WISP1O95388 367 aa9.52□□□□□ -0.89
LINC00520-206ENST00000560336 IFIT2P09913 472 aaKnown RBP9.52□□□□□ -0.89
LINC00520-206ENST00000560336 RXRBP28702 533 aa9.52□□□□□ -0.89
LINC00520-206ENST00000560336 KCNA1Q09470 495 aa9.52□□□□□ -0.89
LINC00520-206ENST00000560336 QSER1Q2KHR3 1735 aa9.52□□□□□ -0.89
LINC00520-206ENST00000560336 ZNF34Q8IZ26 560 aa9.52□□□□□ -0.89
LINC00520-206ENST00000560336 AGGF1Q8N302 714 aaeCLIP9.52□□□□□ -0.89
LINC00520-206ENST00000560336 KLHDC4Q8TBB5 520 aa9.52□□□□□ -0.89
LINC00520-206ENST00000560336 SLC7A3Q8WY07 619 aa9.52□□□□□ -0.89
LINC00520-206ENST00000560336 FAM89AQ96GI7 184 aa9.52□□□□□ -0.89
LINC00520-206ENST00000560336 MEGF10Q96KG7 1140 aa9.52□□□□□ -0.89
LINC00520-206ENST00000560336 COPRSQ9NQ92 184 aa9.52□□□□□ -0.89
LINC00520-206ENST00000560336 AKAP11Q9UKA4 1901 aa9.52□□□□□ -0.89
LINC00520-206ENST00000560336 AOX1Q06278 1338 aa9.52□□□□□ -0.89
LINC00520-206ENST00000560336 CCDC88AQ3V6T2 1871 aa9.51□□□□□ -0.89
LINC00520-206ENST00000560336 EIF1AYO14602 144 aaKnown RBP9.51□□□□□ -0.89
LINC00520-206ENST00000560336 RPS6KA4O75676 772 aa9.51□□□□□ -0.89
LINC00520-206ENST00000560336 GSPT1P15170 499 aaKnown RBP9.51□□□□□ -0.89
LINC00520-206ENST00000560336 MFAP1P55081 439 aaKnown RBP9.51□□□□□ -0.89
LINC00520-206ENST00000560336 PARP10Q53GL7 1025 aa9.51□□□□□ -0.89
LINC00520-206ENST00000560336 TAF7LQ5H9L4 462 aa9.51□□□□□ -0.89
LINC00520-206ENST00000560336 HGSNATQ68CP4 663 aa9.51□□□□□ -0.89
LINC00520-206ENST00000560336 CASC1Q6TDU7 716 aa9.51□□□□□ -0.89
LINC00520-206ENST00000560336 VN1R5Q7Z5H4 357 aa9.51□□□□□ -0.89
LINC00520-206ENST00000560336 FBXO41Q8TF61 875 aa9.51□□□□□ -0.89
LINC00520-206ENST00000560336 GPATCH3Q96I76 525 aa9.51□□□□□ -0.89
LINC00520-206ENST00000560336 DMRTB1Q96MA1 342 aa9.51□□□□□ -0.89
LINC00520-206ENST00000560336 DCTN4Q9UJW0 460 aa9.51□□□□□ -0.89
LINC00520-206ENST00000560336 NIP7Q9Y221 180 aaKnown RBP eCLIP9.51□□□□□ -0.89
LINC00520-206ENST00000560336 UBN2Q6ZU65 1347 aa9.51□□□□□ -0.89
LINC00520-206ENST00000560336 SALL3Q9BXA9 1300 aa9.51□□□□□ -0.89
LINC00520-206ENST00000560336 CHD4Q14839 1912 aa9.5□□□□□ -0.89
LINC00520-206ENST00000560336 IRS4O14654 1257 aaPredicted RBP9.5□□□□□ -0.89
LINC00520-206ENST00000560336 EIF5BO60841 1220 aaKnown RBP9.5□□□□□ -0.89
LINC00520-206ENST00000560336 ADAM11O75078 769 aa9.5□□□□□ -0.89
LINC00520-206ENST00000560336 SASH1O94885 1247 aa9.5□□□□□ -0.89
LINC00520-206ENST00000560336 ITGB7P26010 798 aa9.5□□□□□ -0.89
LINC00520-206ENST00000560336 RFX5P48382 616 aaPredicted RBP9.5□□□□□ -0.89
LINC00520-206ENST00000560336 PTPN12Q05209 780 aaKnown RBP9.5□□□□□ -0.89
LINC00520-206ENST00000560336 CCDC57Q2TAC2 916 aa9.5□□□□□ -0.89
LINC00520-206ENST00000560336 TSHZ3Q63HK5 1081 aa9.5□□□□□ -0.89
LINC00520-206ENST00000560336 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.5□□□□□ -0.89
LINC00520-206ENST00000560336 TMC7Q7Z402 723 aa9.5□□□□□ -0.89
LINC00520-206ENST00000560336 AACSQ86V21 672 aa9.5□□□□□ -0.89
LINC00520-206ENST00000560336 FOXD4L4Q8WXT5 416 aaPredicted RBP9.5□□□□□ -0.89
LINC00520-206ENST00000560336 WNT8BQ93098 351 aa9.5□□□□□ -0.89
LINC00520-206ENST00000560336 RILPL2Q969X0 211 aa9.5□□□□□ -0.89
LINC00520-206ENST00000560336 UTP14AQ9BVJ6 771 aaKnown RBP9.5□□□□□ -0.89
LINC00520-206ENST00000560336 PLA2G12BQ9BX93 195 aa9.5□□□□□ -0.89
LINC00520-206ENST00000560336 LIN7BQ9HAP6 207 aa9.5□□□□□ -0.89
LINC00520-206ENST00000560336 OSGEPQ9NPF4 335 aa9.5□□□□□ -0.89
LINC00520-206ENST00000560336 STAP2Q9UGK3 403 aa9.5□□□□□ -0.89
LINC00520-206ENST00000560336 LAMA4Q16363 1823 aa9.49□□□□□ -0.89
LINC00520-206ENST00000560336 SOX1O00570 391 aaPredicted RBP9.49□□□□□ -0.89
LINC00520-206ENST00000560336 ERC2O15083 957 aa9.49□□□□□ -0.89
LINC00520-206ENST00000560336 DYRK3O43781 588 aa9.49□□□□□ -0.89
LINC00520-206ENST00000560336 PDE8AO60658 829 aa9.49□□□□□ -0.89
LINC00520-206ENST00000560336 HSP90B1P14625 803 aaKnown RBP9.49□□□□□ -0.89
LINC00520-206ENST00000560336 SDSP20132 328 aa9.49□□□□□ -0.89
LINC00520-206ENST00000560336 MAPK1P28482 360 aa9.49□□□□□ -0.89
LINC00520-206ENST00000560336 IKBKEQ14164 716 aa9.49□□□□□ -0.89
LINC00520-206ENST00000560336 DUOXA2Q1HG44 320 aa9.49□□□□□ -0.89
LINC00520-206ENST00000560336 SUSD4Q5VX71 490 aa9.49□□□□□ -0.89
LINC00520-206ENST00000560336 CLEC4GQ6UXB4 293 aa9.49□□□□□ -0.89
LINC00520-206ENST00000560336 ACAD11Q709F0 780 aa9.49□□□□□ -0.89
LINC00520-206ENST00000560336 CCNJLQ8IV13 435 aa9.49□□□□□ -0.89
LINC00520-206ENST00000560336 SYNE4Q8N205 404 aa9.49□□□□□ -0.89
LINC00520-206ENST00000560336 UBASH3BQ8TF42 649 aa9.49□□□□□ -0.89
LINC00520-206ENST00000560336 TCF12Q99081 682 aa9.49□□□□□ -0.89
LINC00520-206ENST00000560336 NPHS2Q9NP85 383 aa9.49□□□□□ -0.89
LINC00520-206ENST00000560336 TTC41PQ6P2S7 1318 aa9.49□□□□□ -0.89
LINC00520-206ENST00000560336 SH3TC1Q8TE82 1336 aa9.49□□□□□ -0.89
LINC00520-206ENST00000560336 TNRC6CQ9HCJ0 1690 aaKnown RBP9.48□□□□□ -0.89
LINC00520-206ENST00000560336 DOCK2Q92608 1830 aa9.48□□□□□ -0.89
LINC00520-206ENST00000560336 ANKRD18BA2A2Z9 1011 aa9.48□□□□□ -0.89
LINC00520-206ENST00000560336 HMGB2P26583 209 aaKnown RBP9.48□□□□□ -0.89
LINC00520-206ENST00000560336 RFC4P35249 363 aa9.48□□□□□ -0.89
LINC00520-206ENST00000560336 ARL4DP49703 201 aa9.48□□□□□ -0.89
LINC00520-206ENST00000560336 CTSWP56202 376 aa9.48□□□□□ -0.89
LINC00520-206ENST00000560336 NLRP12P59046 1061 aa9.48□□□□□ -0.89
LINC00520-206ENST00000560336 TFCP2Q12800 502 aa9.48□□□□□ -0.89
LINC00520-206ENST00000560336 IFIT5Q13325 482 aaKnown RBP9.48□□□□□ -0.89
LINC00520-206ENST00000560336 KIAA0319Q5VV43 1072 aa9.48□□□□□ -0.89
LINC00520-206ENST00000560336 CCDC74AQ96AQ1 378 aa9.48□□□□□ -0.89
LINC00520-206ENST00000560336 ALKBH8Q96BT7 664 aaKnown RBP9.48□□□□□ -0.89
LINC00520-206ENST00000560336 CSRNP1Q96S65 589 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms