RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 PLA2G6O60733 806 aa7.41□□□□□ -1.22
SPG11-221ENST00000560299 PPFIA3O75145 1194 aa7.41□□□□□ -1.22
SPG11-221ENST00000560299 F13A1P00488 732 aa7.41□□□□□ -1.22
SPG11-221ENST00000560299 GOLGA8HP0CJ92 632 aa7.41□□□□□ -1.22
SPG11-221ENST00000560299 CETPP11597 493 aa7.41□□□□□ -1.22
SPG11-221ENST00000560299 STAT2P52630 851 aa7.41□□□□□ -1.22
SPG11-221ENST00000560299 BACE1P56817 501 aa7.41□□□□□ -1.22
SPG11-221ENST00000560299 JAG1P78504 1218 aa7.41□□□□□ -1.22
SPG11-221ENST00000560299 KIF23Q02241 960 aaPredicted RBP7.41□□□□□ -1.22
SPG11-221ENST00000560299 FUT2Q10981 343 aa7.41□□□□□ -1.22
SPG11-221ENST00000560299 SPP2Q13103 211 aa7.41□□□□□ -1.22
SPG11-221ENST00000560299 SNAPC2Q13487 334 aa7.41□□□□□ -1.22
SPG11-221ENST00000560299 ATL3Q6DD88 541 aa7.41□□□□□ -1.22
SPG11-221ENST00000560299 GALNT17Q6IS24 598 aa7.41□□□□□ -1.22
SPG11-221ENST00000560299 CYP4F22Q6NT55 531 aa7.41□□□□□ -1.22
SPG11-221ENST00000560299 KCTD1Q719H9 257 aa7.41□□□□□ -1.22
SPG11-221ENST00000560299 FASTKD5Q7L8L6 764 aaKnown RBP7.41□□□□□ -1.22
SPG11-221ENST00000560299 BRAPQ7Z569 592 aa7.41□□□□□ -1.22
SPG11-221ENST00000560299 PROCA1Q8NCQ7 364 aaPredicted RBP7.41□□□□□ -1.22
SPG11-221ENST00000560299 ACER1Q8TDN7 264 aa7.41□□□□□ -1.22
SPG11-221ENST00000560299 TNPO1Q92973 898 aaKnown RBP7.41□□□□□ -1.22
SPG11-221ENST00000560299 ZKSCAN4Q969J2 545 aaPredicted RBP7.41□□□□□ -1.22
SPG11-221ENST00000560299 MARVELD3Q96A59 401 aa7.41□□□□□ -1.22
SPG11-221ENST00000560299 BEGAINQ9BUH8 593 aa7.41□□□□□ -1.22
SPG11-221ENST00000560299 GLT8D2Q9H1C3 349 aa7.41□□□□□ -1.22
SPG11-221ENST00000560299 RIOX1Q9H6W3 641 aa7.41□□□□□ -1.22
SPG11-221ENST00000560299 VAT1LQ9HCJ6 419 aa7.41□□□□□ -1.22
SPG11-221ENST00000560299 FEM1BQ9UK73 627 aa7.41□□□□□ -1.22
SPG11-221ENST00000560299 PNMA2Q9UL42 364 aa7.41□□□□□ -1.22
SPG11-221ENST00000560299 MTMR6Q9Y217 621 aa7.41□□□□□ -1.22
SPG11-221ENST00000560299 AFG3L2Q9Y4W6 797 aa7.41□□□□□ -1.22
SPG11-221ENST00000560299 ZHX2Q9Y6X8 837 aa7.41□□□□□ -1.22
SPG11-221ENST00000560299 CNTNAP5Q8WYK1 1306 aa7.41□□□□□ -1.22
SPG11-221ENST00000560299 DOCK1Q14185 1865 aa7.41□□□□□ -1.22
SPG11-221ENST00000560299 A0A0G2JLL6 359 aaPredicted RBP7.4□□□□□ -1.22
SPG11-221ENST00000560299 PNMA6FA0A0J9YX94 578 aa7.4□□□□□ -1.22
SPG11-221ENST00000560299 GNRH1P01148 92 aa7.4□□□□□ -1.22
SPG11-221ENST00000560299 FDX1P10109 184 aa7.4□□□□□ -1.22
SPG11-221ENST00000560299 GNA11P29992 359 aa7.4□□□□□ -1.22
SPG11-221ENST00000560299 CTCFP49711 727 aaPredicted RBP7.4□□□□□ -1.22
SPG11-221ENST00000560299 FOSBP53539 338 aa7.4□□□□□ -1.22
SPG11-221ENST00000560299 NLRP5P59047 1200 aa7.4□□□□□ -1.22
SPG11-221ENST00000560299 PKP1Q13835 747 aa7.4□□□□□ -1.22
SPG11-221ENST00000560299 ZYXQ15942 572 aaKnown RBP7.4□□□□□ -1.22
SPG11-221ENST00000560299 SHROOM1Q2M3G4 852 aaPredicted RBP7.4□□□□□ -1.22
SPG11-221ENST00000560299 SYDE2Q5VT97 1194 aa7.4□□□□□ -1.22
SPG11-221ENST00000560299 FOXD4L5Q5VV16 416 aaPredicted RBP7.4□□□□□ -1.22
SPG11-221ENST00000560299 KRT40Q6A162 431 aa7.4□□□□□ -1.22
SPG11-221ENST00000560299 BTNL9Q6UXG8 535 aa7.4□□□□□ -1.22
SPG11-221ENST00000560299 DLK2Q6UY11 383 aa7.4□□□□□ -1.22
SPG11-221ENST00000560299 CLEC17AQ6ZS10 378 aa7.4□□□□□ -1.22
SPG11-221ENST00000560299 PRRT2Q7Z6L0 340 aaPredicted RBP7.4□□□□□ -1.22
SPG11-221ENST00000560299 ANKRD23Q86SG2 305 aa7.4□□□□□ -1.22
SPG11-221ENST00000560299 HOMER1Q86YM7 354 aa7.4□□□□□ -1.22
SPG11-221ENST00000560299 ADGRF4Q8IZF3 695 aa7.4□□□□□ -1.22
SPG11-221ENST00000560299 SPICE1Q8N0Z3 855 aa7.4□□□□□ -1.22
SPG11-221ENST00000560299 BICD2Q8TD16 824 aa7.4□□□□□ -1.22
SPG11-221ENST00000560299 FOXD4L4Q8WXT5 416 aaPredicted RBP7.4□□□□□ -1.22
SPG11-221ENST00000560299 PIBF1Q8WXW3 757 aa7.4□□□□□ -1.22
SPG11-221ENST00000560299 OPTNQ96CV9 577 aa7.4□□□□□ -1.22
SPG11-221ENST00000560299 C12orf42Q96LP6 360 aa7.4□□□□□ -1.22
SPG11-221ENST00000560299 ZNF396Q96N95 335 aaPredicted RBP7.4□□□□□ -1.22
SPG11-221ENST00000560299 UBA5Q9GZZ9 404 aa7.4□□□□□ -1.22
SPG11-221ENST00000560299 FOXP1Q9H334 677 aaPredicted RBP7.4□□□□□ -1.22
SPG11-221ENST00000560299 CFAP45Q9UL16 551 aa7.4□□□□□ -1.22
SPG11-221ENST00000560299 ZDHHC9Q9Y397 364 aa7.4□□□□□ -1.22
SPG11-221ENST00000560299 CTDP1Q9Y5B0 961 aaPredicted RBP7.4□□□□□ -1.22
SPG11-221ENST00000560299 OTOFQ9HC10 1997 aa7.4□□□□□ -1.23
SPG11-221ENST00000560299 TRIM75PA6NK02 468 aa7.39□□□□□ -1.23
SPG11-221ENST00000560299 DDX11L8A8MPP1 907 aa7.39□□□□□ -1.23
SPG11-221ENST00000560299 IRF6O14896 467 aa7.39□□□□□ -1.23
SPG11-221ENST00000560299 ZBTB5O15062 677 aa7.39□□□□□ -1.23
SPG11-221ENST00000560299 CYTH3O43739 400 aa7.39□□□□□ -1.23
SPG11-221ENST00000560299 MMP1P03956 469 aa7.39□□□□□ -1.23
SPG11-221ENST00000560299 NCLP19338 710 aaKnown RBP7.39□□□□□ -1.23
SPG11-221ENST00000560299 HOXA7P31268 230 aaPredicted RBP7.39□□□□□ -1.23
SPG11-221ENST00000560299 KRT2P35908 639 aa7.39□□□□□ -1.23
SPG11-221ENST00000560299 SLC16A2P36021 539 aa7.39□□□□□ -1.23
SPG11-221ENST00000560299 NAPAP54920 295 aa7.39□□□□□ -1.23
SPG11-221ENST00000560299 KRT85P78386 507 aa7.39□□□□□ -1.23
SPG11-221ENST00000560299 HTRA3P83110 453 aa7.39□□□□□ -1.23
SPG11-221ENST00000560299 GUCY1B3Q02153 619 aa7.39□□□□□ -1.23
SPG11-221ENST00000560299 MTMR2Q13614 643 aa7.39□□□□□ -1.23
SPG11-221ENST00000560299 PKN1Q16512 942 aa7.39□□□□□ -1.23
SPG11-221ENST00000560299 FAM83BQ5T0W9 1011 aa7.39□□□□□ -1.23
SPG11-221ENST00000560299 TTBK2Q6IQ55 1244 aa7.39□□□□□ -1.23
SPG11-221ENST00000560299 PPP1R18Q6NYC8 613 aa7.39□□□□□ -1.23
SPG11-221ENST00000560299 MOB2Q70IA6 237 aa7.39□□□□□ -1.23
SPG11-221ENST00000560299 HEATR3Q7Z4Q2 680 aa7.39□□□□□ -1.23
SPG11-221ENST00000560299 FERMT3Q86UX7 667 aa7.39□□□□□ -1.23
SPG11-221ENST00000560299 IFNL1Q8IU54 200 aa7.39□□□□□ -1.23
SPG11-221ENST00000560299 TEX2Q8IWB9 1127 aa7.39□□□□□ -1.23
SPG11-221ENST00000560299 PRPF38AQ8NAV1 312 aaKnown RBP7.39□□□□□ -1.23
SPG11-221ENST00000560299 GTF3C2Q8WUA4 911 aaPredicted RBP7.39□□□□□ -1.23
SPG11-221ENST00000560299 PIGSQ96S52 555 aa7.39□□□□□ -1.23
SPG11-221ENST00000560299 PHF20Q9BVI0 1012 aa7.39□□□□□ -1.23
SPG11-221ENST00000560299 AMNQ9BXJ7 453 aa7.39□□□□□ -1.23
SPG11-221ENST00000560299 SCAND2PQ9GZW5 306 aaPredicted RBP7.39□□□□□ -1.23
SPG11-221ENST00000560299 JMJD4Q9H9V9 463 aa7.39□□□□□ -1.23
SPG11-221ENST00000560299 C6orf50Q9HD87 102 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms