RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 HOMER2Q9NSB8 354 aa27.38■■□□□ 1.97
CRNDE-209ENST00000560208 TCP11L1Q9NUJ3 509 aa27.38■■□□□ 1.97
CRNDE-209ENST00000560208 ZNF865P0CJ78 1059 aaPredicted RBP27.37■■□□□ 1.97
CRNDE-209ENST00000560208 RARBP10826 455 aa27.37■■□□□ 1.97
CRNDE-209ENST00000560208 TOP1P11387 765 aaKnown RBP27.37■■□□□ 1.97
CRNDE-209ENST00000560208 PCP11498 1178 aaKnown RBP27.37■■□□□ 1.97
CRNDE-209ENST00000560208 BMP8BP34820 402 aa27.37■■□□□ 1.97
CRNDE-209ENST00000560208 LRRC41Q15345 812 aa27.37■■□□□ 1.97
CRNDE-209ENST00000560208 MAMDC4Q6UXC1 1216 aa27.37■■□□□ 1.97
CRNDE-209ENST00000560208 ZNF467Q7Z7K2 595 aaPredicted RBP27.37■■□□□ 1.97
CRNDE-209ENST00000560208 DCAF4Q8WV16 495 aa27.37■■□□□ 1.97
CRNDE-209ENST00000560208 AGBL1Q96MI9 1066 aa27.37■■□□□ 1.97
CRNDE-209ENST00000560208 PCDH10Q9P2E7 1040 aa27.37■■□□□ 1.97
CRNDE-209ENST00000560208 ZNF536O15090 1300 aa27.37■■□□□ 1.97
CRNDE-209ENST00000560208 CHMLP26374 656 aa27.36■■□□□ 1.97
CRNDE-209ENST00000560208 CCDC96Q2M329 555 aa27.36■■□□□ 1.97
CRNDE-209ENST00000560208 TBC1D10CQ8IV04 446 aa27.36■■□□□ 1.97
CRNDE-209ENST00000560208 TMEM47Q9BQJ4 181 aa27.36■■□□□ 1.97
CRNDE-209ENST00000560208 XPNPEP3Q9NQH7 507 aa27.36■■□□□ 1.97
CRNDE-209ENST00000560208 PRR12Q9ULL5 1215 aa27.36■■□□□ 1.97
CRNDE-209ENST00000560208 SZT2Q5T011 3432 aa27.36■■□□□ 1.97
CRNDE-209ENST00000560208 SYNGAP1Q96PV0 1343 aa27.36■■□□□ 1.97
CRNDE-209ENST00000560208 LAMA4Q16363 1823 aa27.35■■□□□ 1.97
CRNDE-209ENST00000560208 SNAI1O95863 264 aaPredicted RBP27.35■■□□□ 1.97
CRNDE-209ENST00000560208 AKR1A1P14550 325 aa27.35■■□□□ 1.97
CRNDE-209ENST00000560208 MAGEA10P43363 369 aaPredicted RBP27.35■■□□□ 1.97
CRNDE-209ENST00000560208 SNAP25P60880 206 aa27.35■■□□□ 1.97
CRNDE-209ENST00000560208 RNF41Q9H4P4 317 aaPredicted RBP27.35■■□□□ 1.97
CRNDE-209ENST00000560208 ACAD9Q9H845 621 aa27.35■■□□□ 1.97
CRNDE-209ENST00000560208 ZNF213O14771 459 aa27.34■■□□□ 1.97
CRNDE-209ENST00000560208 ADCYAP1R1P41586 468 aa27.34■■□□□ 1.97
CRNDE-209ENST00000560208 TKFCQ3LXA3 575 aa27.34■■□□□ 1.97
CRNDE-209ENST00000560208 BMP2KLQ5H9B9 411 aa27.34■■□□□ 1.97
CRNDE-209ENST00000560208 CCDC174Q6PII3 467 aa27.34■■□□□ 1.97
CRNDE-209ENST00000560208 IL25Q9H293 177 aa27.34■■□□□ 1.97
CRNDE-209ENST00000560208 RNF146Q9NTX7 359 aa27.34■■□□□ 1.97
CRNDE-209ENST00000560208 ALAS1P13196 640 aa27.33■■□□□ 1.97
CRNDE-209ENST00000560208 RTP1P59025 263 aa27.33■■□□□ 1.97
CRNDE-209ENST00000560208 SLC39A5Q6ZMH5 540 aa27.33■■□□□ 1.97
CRNDE-209ENST00000560208 RUFY2Q8WXA3 655 aa27.33■■□□□ 1.97
CRNDE-209ENST00000560208 FGD4Q96M96 766 aa27.33■■□□□ 1.97
CRNDE-209ENST00000560208 TTC14Q96N46 770 aa27.33■■□□□ 1.97
CRNDE-209ENST00000560208 TRERF1Q96PN7 1200 aa27.33■■□□□ 1.97
CRNDE-209ENST00000560208 PGK1P00558 417 aa27.32■■□□□ 1.96
CRNDE-209ENST00000560208 TTBK2Q6IQ55 1244 aa27.32■■□□□ 1.96
CRNDE-209ENST00000560208 RNF180Q86T96 592 aa27.32■■□□□ 1.96
CRNDE-209ENST00000560208 FERMT2Q96AC1 680 aa27.32■■□□□ 1.96
CRNDE-209ENST00000560208 A1CFQ9NQ94 594 aaKnown RBP27.32■■□□□ 1.96
CRNDE-209ENST00000560208 FAM184BQ9ULE4 1060 aa27.32■■□□□ 1.96
CRNDE-209ENST00000560208 SLC16A2P36021 539 aa27.31■■□□□ 1.96
CRNDE-209ENST00000560208 BTNL9Q6UXG8 535 aa27.31■■□□□ 1.96
CRNDE-209ENST00000560208 ESR2Q92731 530 aa27.31■■□□□ 1.96
CRNDE-209ENST00000560208 LENG1Q96BZ8 264 aaPredicted RBP27.31■■□□□ 1.96
CRNDE-209ENST00000560208 DSCC1Q9BVC3 393 aa27.31■■□□□ 1.96
CRNDE-209ENST00000560208 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.31■■□□□ 1.96
CRNDE-209ENST00000560208 ZHX1Q9UKY1 873 aaPredicted RBP27.31■■□□□ 1.96
CRNDE-209ENST00000560208 ATP11BQ9Y2G3 1177 aa27.31■■□□□ 1.96
CRNDE-209ENST00000560208 NEDD4P46934 1319 aa27.31■■□□□ 1.96
CRNDE-209ENST00000560208 POTEB2H3BUK9 544 aa27.3■■□□□ 1.96
CRNDE-209ENST00000560208 CNTN2Q02246 1040 aa27.3■■□□□ 1.96
CRNDE-209ENST00000560208 ACVR2BQ13705 512 aa27.3■■□□□ 1.96
CRNDE-209ENST00000560208 FAM133AQ8N9E0 248 aa27.3■■□□□ 1.96
CRNDE-209ENST00000560208 GPCPD1Q9NPB8 672 aa27.3■■□□□ 1.96
CRNDE-209ENST00000560208 PHF24Q9UPV7 400 aa27.3■■□□□ 1.96
CRNDE-209ENST00000560208 RAD50Q92878 1312 aa27.3■■□□□ 1.96
CRNDE-209ENST00000560208 LAMA3Q16787 3333 aa27.3■■□□□ 1.96
CRNDE-209ENST00000560208 SYDE2Q5VT97 1194 aa27.29■■□□□ 1.96
CRNDE-209ENST00000560208 UBE2OQ9C0C9 1292 aaKnown RBP27.29■■□□□ 1.96
CRNDE-209ENST00000560208 ABHD16BQ9H3Z7 469 aa27.29■■□□□ 1.96
CRNDE-209ENST00000560208 CCPG1Q9ULG6 757 aa27.29■■□□□ 1.96
CRNDE-209ENST00000560208 FRMPD2Q68DX3 1309 aaPredicted RBP27.29■■□□□ 1.96
CRNDE-209ENST00000560208 ICAM1P05362 532 aa27.28■■□□□ 1.96
CRNDE-209ENST00000560208 PDHBP11177 359 aa27.28■■□□□ 1.96
CRNDE-209ENST00000560208 MDM2Q00987 491 aaPredicted RBP27.28■■□□□ 1.96
CRNDE-209ENST00000560208 SNX17Q15036 470 aa27.28■■□□□ 1.96
CRNDE-209ENST00000560208 MUM1L1Q5H9M0 696 aa27.28■■□□□ 1.96
CRNDE-209ENST00000560208 ARMCX2Q7L311 632 aa27.28■■□□□ 1.96
CRNDE-209ENST00000560208 CCDC144CPQ8IYA2 1237 aa27.28■■□□□ 1.96
CRNDE-209ENST00000560208 ZKSCAN3Q9BRR0 538 aa27.28■■□□□ 1.96
CRNDE-209ENST00000560208 RANBP17Q9H2T7 1088 aaKnown RBP27.28■■□□□ 1.96
CRNDE-209ENST00000560208 ADAMTS4O75173 837 aa27.27■■□□□ 1.96
CRNDE-209ENST00000560208 NT5C2P49902 561 aa27.27■■□□□ 1.96
CRNDE-209ENST00000560208 IMMTQ16891 758 aaKnown RBP27.27■■□□□ 1.96
CRNDE-209ENST00000560208 PRKAG2Q9UGJ0 569 aa27.27■■□□□ 1.96
CRNDE-209ENST00000560208 CTNNA3Q9UI47 895 aa27.27■■□□□ 1.96
CRNDE-209ENST00000560208 SYNRGQ9UMZ2 1314 aa27.26■■□□□ 1.95
CRNDE-209ENST00000560208 SOWAHBA6NEL2 793 aa27.26■■□□□ 1.95
CRNDE-209ENST00000560208 SGSM2O43147 1006 aa27.26■■□□□ 1.95
CRNDE-209ENST00000560208 DUSP11O75319 330 aaKnown RBP27.26■■□□□ 1.95
CRNDE-209ENST00000560208 ZNF543Q08ER8 600 aa27.26■■□□□ 1.95
CRNDE-209ENST00000560208 CCDC144BQ3MJ40 725 aa27.26■■□□□ 1.95
CRNDE-209ENST00000560208 TRIM60Q495X7 471 aa27.26■■□□□ 1.95
CRNDE-209ENST00000560208 LBHD1Q9BQE6 289 aaPredicted RBP27.26■■□□□ 1.95
CRNDE-209ENST00000560208 SOX1O00570 391 aaPredicted RBP27.25■■□□□ 1.95
CRNDE-209ENST00000560208 KDM4AO75164 1064 aa27.25■■□□□ 1.95
CRNDE-209ENST00000560208 CCDC178Q5BJE1 867 aa27.25■■□□□ 1.95
CRNDE-209ENST00000560208 C1orf53Q5VUE5 145 aa27.25■■□□□ 1.95
CRNDE-209ENST00000560208 IQCA1Q86XH1 822 aa27.25■■□□□ 1.95
CRNDE-209ENST00000560208 DGKHQ86XP1 1220 aa27.25■■□□□ 1.95
CRNDE-209ENST00000560208 TDHQ8IZJ6 230 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms