RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 RBBP6Q7Z6E9 1792 aaKnown RBP13.99□□□□□ -0.17
RABGGTA-215ENST00000560207 hCG_1984214I3L0E3 225 aa13.99□□□□□ -0.17
RABGGTA-215ENST00000560207 CNMDO75829 334 aa13.99□□□□□ -0.17
RABGGTA-215ENST00000560207 FCER1AP12319 257 aa13.99□□□□□ -0.17
RABGGTA-215ENST00000560207 MCM2P49736 904 aa13.99□□□□□ -0.17
RABGGTA-215ENST00000560207 METAP2P50579 478 aaKnown RBP eCLIP13.99□□□□□ -0.17
RABGGTA-215ENST00000560207 IRF5Q13568 498 aa13.99□□□□□ -0.17
RABGGTA-215ENST00000560207 KCTD2Q14681 263 aa13.99□□□□□ -0.17
RABGGTA-215ENST00000560207 RTN1Q16799 776 aa13.99□□□□□ -0.17
RABGGTA-215ENST00000560207 SNRNP48Q6IEG0 339 aaKnown RBP13.99□□□□□ -0.17
RABGGTA-215ENST00000560207 SAMD1Q6SPF0 538 aaPredicted RBP13.99□□□□□ -0.17
RABGGTA-215ENST00000560207 MICU3Q86XE3 530 aa13.99□□□□□ -0.17
RABGGTA-215ENST00000560207 ADGRF4Q8IZF3 695 aa13.99□□□□□ -0.17
RABGGTA-215ENST00000560207 ZNF713Q8N859 430 aaPredicted RBP13.99□□□□□ -0.17
RABGGTA-215ENST00000560207 CD99L2Q8TCZ2 262 aa13.99□□□□□ -0.17
RABGGTA-215ENST00000560207 TBC1D32Q96NH3 1257 aa13.99□□□□□ -0.17
RABGGTA-215ENST00000560207 NUDT12Q9BQG2 462 aa13.99□□□□□ -0.17
RABGGTA-215ENST00000560207 AMNQ9BXJ7 453 aa13.99□□□□□ -0.17
RABGGTA-215ENST00000560207 LRRC2Q9BYS8 371 aa13.99□□□□□ -0.17
RABGGTA-215ENST00000560207 UPF3BQ9BZI7 483 aaKnown RBP13.99□□□□□ -0.17
RABGGTA-215ENST00000560207 MAP3K20Q9NYL2 800 aaKnown RBP13.99□□□□□ -0.17
RABGGTA-215ENST00000560207 SEC63Q9UGP8 760 aaKnown RBP13.99□□□□□ -0.17
RABGGTA-215ENST00000560207 SRRDQ9UH36 339 aa13.99□□□□□ -0.17
RABGGTA-215ENST00000560207 BAZ2BQ9UIF8 2168 aaKnown RBP13.99□□□□□ -0.17
RABGGTA-215ENST00000560207 PFASO15067 1338 aa13.98□□□□□ -0.17
RABGGTA-215ENST00000560207 ABCB11O95342 1321 aa13.98□□□□□ -0.17
RABGGTA-215ENST00000560207 PNMA6FA0A0J9YX94 578 aa13.98□□□□□ -0.17
RABGGTA-215ENST00000560207 GOLGA8AA7E2F4 631 aa13.98□□□□□ -0.17
RABGGTA-215ENST00000560207 GOLGA8BA8MQT2 603 aa13.98□□□□□ -0.17
RABGGTA-215ENST00000560207 ZBTB5O15062 677 aa13.98□□□□□ -0.17
RABGGTA-215ENST00000560207 CDKL5O76039 1030 aa13.98□□□□□ -0.17
RABGGTA-215ENST00000560207 GOLGA8HP0CJ92 632 aa13.98□□□□□ -0.17
RABGGTA-215ENST00000560207 XRCC5P13010 732 aaKnown RBP13.98□□□□□ -0.17
RABGGTA-215ENST00000560207 ERCC3P19447 782 aa13.98□□□□□ -0.17
RABGGTA-215ENST00000560207 SLC16A2P36021 539 aa13.98□□□□□ -0.17
RABGGTA-215ENST00000560207 Q3C1V9 767 aa13.98□□□□□ -0.17
RABGGTA-215ENST00000560207 TTBK2Q6IQ55 1244 aa13.98□□□□□ -0.17
RABGGTA-215ENST00000560207 GPR142Q7Z601 462 aa13.98□□□□□ -0.17
RABGGTA-215ENST00000560207 NCAPG2Q86XI2 1143 aa13.98□□□□□ -0.17
RABGGTA-215ENST00000560207 MCF2L2Q86YR7 1114 aa13.98□□□□□ -0.17
RABGGTA-215ENST00000560207 CPXCR1Q8N123 301 aa13.98□□□□□ -0.17
RABGGTA-215ENST00000560207 FAM177A1Q8N128 213 aaPredicted RBP13.98□□□□□ -0.17
RABGGTA-215ENST00000560207 RGS22Q8NE09 1264 aa13.98□□□□□ -0.17
RABGGTA-215ENST00000560207 MTMR8Q96EF0 704 aa13.98□□□□□ -0.17
RABGGTA-215ENST00000560207 RRP36Q96EU6 259 aaKnown RBP13.98□□□□□ -0.17
RABGGTA-215ENST00000560207 ZSCAN31Q96LW9 406 aaPredicted RBP13.98□□□□□ -0.17
RABGGTA-215ENST00000560207 ACAD9Q9H845 621 aa13.98□□□□□ -0.17
RABGGTA-215ENST00000560207 SENP2Q9HC62 589 aa13.98□□□□□ -0.17
RABGGTA-215ENST00000560207 CCPG1Q9ULG6 757 aa13.98□□□□□ -0.17
RABGGTA-215ENST00000560207 DIS3Q9Y2L1 958 aaKnown RBP13.98□□□□□ -0.17
RABGGTA-215ENST00000560207 TRIM17Q9Y577 477 aa13.98□□□□□ -0.17
RABGGTA-215ENST00000560207 LOC102724159A0A0B4J2E5 919 aa13.97□□□□□ -0.17
RABGGTA-215ENST00000560207 CAPN2P17655 700 aa13.97□□□□□ -0.17
RABGGTA-215ENST00000560207 PTPREP23469 700 aa13.97□□□□□ -0.17
RABGGTA-215ENST00000560207 RGS2P41220 211 aa13.97□□□□□ -0.17
RABGGTA-215ENST00000560207 APOBRQ0VD83 1088 aa13.97□□□□□ -0.17
RABGGTA-215ENST00000560207 TOB2Q14106 344 aaPredicted RBP13.97□□□□□ -0.17
RABGGTA-215ENST00000560207 PWP2Q15269 919 aaKnown RBP13.97□□□□□ -0.17
RABGGTA-215ENST00000560207 CDC37Q16543 378 aaPredicted RBP13.97□□□□□ -0.17
RABGGTA-215ENST00000560207 FBXO46Q6PJ61 603 aaPredicted RBP13.97□□□□□ -0.17
RABGGTA-215ENST00000560207 TMTC3Q6ZXV5 915 aa13.97□□□□□ -0.17
RABGGTA-215ENST00000560207 OTOP1Q7RTM1 612 aa13.97□□□□□ -0.17
RABGGTA-215ENST00000560207 FBXO11Q86XK2 927 aa13.97□□□□□ -0.17
RABGGTA-215ENST00000560207 STAG2Q8N3U4 1231 aa13.97□□□□□ -0.17
RABGGTA-215ENST00000560207 PXYLP1Q8TE99 480 aa13.97□□□□□ -0.17
RABGGTA-215ENST00000560207 TRIM47Q96LD4 638 aa13.97□□□□□ -0.17
RABGGTA-215ENST00000560207 TCEANC2Q96MN5 208 aa13.97□□□□□ -0.17
RABGGTA-215ENST00000560207 UBA5Q9GZZ9 404 aa13.97□□□□□ -0.17
RABGGTA-215ENST00000560207 JMJD4Q9H9V9 463 aa13.97□□□□□ -0.17
RABGGTA-215ENST00000560207 BRPF3Q9ULD4 1205 aa13.97□□□□□ -0.17
RABGGTA-215ENST00000560207 NAP1L2Q9ULW6 460 aaPredicted RBP13.97□□□□□ -0.17
RABGGTA-215ENST00000560207 MRPL11Q9Y3B7 192 aaKnown RBP13.97□□□□□ -0.17
RABGGTA-215ENST00000560207 ZNF536O15090 1300 aa13.96□□□□□ -0.17
RABGGTA-215ENST00000560207 B4DLN1 442 aa13.96□□□□□ -0.17
RABGGTA-215ENST00000560207 CPLX1O14810 134 aa13.96□□□□□ -0.17
RABGGTA-215ENST00000560207 HOXC6P09630 235 aa13.96□□□□□ -0.17
RABGGTA-215ENST00000560207 CPA1P15085 419 aa13.96□□□□□ -0.17
RABGGTA-215ENST00000560207 PDIA3P30101 505 aaKnown RBP13.96□□□□□ -0.17
RABGGTA-215ENST00000560207 MRPL12P52815 198 aaKnown RBP13.96□□□□□ -0.17
RABGGTA-215ENST00000560207 AKAP17AQ02040 695 aaKnown RBP13.96□□□□□ -0.17
RABGGTA-215ENST00000560207 GRB14Q14449 540 aa13.96□□□□□ -0.17
RABGGTA-215ENST00000560207 WDR78Q5VTH9 848 aa13.96□□□□□ -0.17
RABGGTA-215ENST00000560207 POTEEQ6S8J3 1075 aa13.96□□□□□ -0.17
RABGGTA-215ENST00000560207 NBPF11Q86T75 865 aa13.96□□□□□ -0.17
RABGGTA-215ENST00000560207 TRIM22Q8IYM9 498 aa13.96□□□□□ -0.17
RABGGTA-215ENST00000560207 MSL3Q8N5Y2 521 aaKnown RBP13.96□□□□□ -0.17
RABGGTA-215ENST00000560207 RAET1EQ8TD07 263 aa13.96□□□□□ -0.17
RABGGTA-215ENST00000560207 TRERF1Q96PN7 1200 aa13.96□□□□□ -0.17
RABGGTA-215ENST00000560207 MPHOSPH6Q99547 160 aaKnown RBP13.96□□□□□ -0.17
RABGGTA-215ENST00000560207 GLT8D2Q9H1C3 349 aa13.96□□□□□ -0.17
RABGGTA-215ENST00000560207 PORCNQ9H237 461 aa13.96□□□□□ -0.17
RABGGTA-215ENST00000560207 RAVER2Q9HCJ3 691 aaKnown RBP13.96□□□□□ -0.17
RABGGTA-215ENST00000560207 GPHNQ9NQX3 736 aaPredicted RBP13.96□□□□□ -0.17
RABGGTA-215ENST00000560207 SMCHD1A6NHR9 2005 aa13.95□□□□□ -0.18
RABGGTA-215ENST00000560207 AK2P54819 239 aa13.95□□□□□ -0.18
RABGGTA-215ENST00000560207 MAP2K5Q13163 448 aa13.95□□□□□ -0.18
RABGGTA-215ENST00000560207 QRICH1Q2TAL8 776 aa13.95□□□□□ -0.18
RABGGTA-215ENST00000560207 MORN1Q5T089 497 aa13.95□□□□□ -0.18
RABGGTA-215ENST00000560207 IFFO2Q5TF58 517 aa13.95□□□□□ -0.18
RABGGTA-215ENST00000560207 CCDC174Q6PII3 467 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms