RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 DIAPH3Q9NSV4 1193 aa14.83□□□□□ -0.04
SNX1-209ENST00000559961 RNF146Q9NTX7 359 aa14.83□□□□□ -0.04
SNX1-209ENST00000559961 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.83□□□□□ -0.04
SNX1-209ENST00000559961 MYH7P12883 1935 aa14.83□□□□□ -0.04
SNX1-209ENST00000559961 TRIOBPQ9H2D6 2365 aa14.82□□□□□ -0.04
SNX1-209ENST00000559961 SOX1O00570 391 aaPredicted RBP14.82□□□□□ -0.04
SNX1-209ENST00000559961 C6orf222P0C671 652 aaPredicted RBP14.82□□□□□ -0.04
SNX1-209ENST00000559961 TOP1P11387 765 aaKnown RBP14.82□□□□□ -0.04
SNX1-209ENST00000559961 CCDC178Q5BJE1 867 aa14.82□□□□□ -0.04
SNX1-209ENST00000559961 CHD1LQ86WJ1 897 aa14.82□□□□□ -0.04
SNX1-209ENST00000559961 FAM227BQ96M60 508 aa14.82□□□□□ -0.04
SNX1-209ENST00000559961 GLT1D1Q96MS3 346 aa14.82□□□□□ -0.04
SNX1-209ENST00000559961 CCPG1Q9ULG6 757 aa14.82□□□□□ -0.04
SNX1-209ENST00000559961 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.82□□□□□ -0.04
SNX1-209ENST00000559961 SALL3Q9BXA9 1300 aa14.82□□□□□ -0.04
SNX1-209ENST00000559961 ZNF236Q9UL36 1845 aa14.82□□□□□ -0.04
SNX1-209ENST00000559961 DNAJC25-GNG10A0A024R161 153 aa14.81□□□□□ -0.04
SNX1-209ENST00000559961 ZNF213O14771 459 aa14.81□□□□□ -0.04
SNX1-209ENST00000559961 ZEB2O60315 1214 aa14.81□□□□□ -0.04
SNX1-209ENST00000559961 PQBP1O60828 265 aaKnown RBP14.81□□□□□ -0.04
SNX1-209ENST00000559961 SNAI1O95863 264 aaPredicted RBP14.81□□□□□ -0.04
SNX1-209ENST00000559961 CLTBP09497 229 aa14.81□□□□□ -0.04
SNX1-209ENST00000559961 HSPD1P10809 573 aaKnown RBP14.81□□□□□ -0.04
SNX1-209ENST00000559961 RAG1P15918 1043 aa14.81□□□□□ -0.04
SNX1-209ENST00000559961 NT5C2P49902 561 aa14.81□□□□□ -0.04
SNX1-209ENST00000559961 TLE2Q04725 743 aa14.81□□□□□ -0.04
SNX1-209ENST00000559961 NMIQ13287 307 aaPredicted RBP14.81□□□□□ -0.04
SNX1-209ENST00000559961 VPS53Q5VIR6 699 aa14.81□□□□□ -0.04
SNX1-209ENST00000559961 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.81□□□□□ -0.04
SNX1-209ENST00000559961 ARMCX2Q7L311 632 aa14.81□□□□□ -0.04
SNX1-209ENST00000559961 ESR2Q92731 530 aa14.81□□□□□ -0.04
SNX1-209ENST00000559961 AGBL1Q96MI9 1066 aa14.81□□□□□ -0.04
SNX1-209ENST00000559961 TTC14Q96N46 770 aa14.81□□□□□ -0.04
SNX1-209ENST00000559961 AP5M1Q9H0R1 490 aa14.81□□□□□ -0.04
SNX1-209ENST00000559961 TMEM39AQ9NV64 488 aa14.81□□□□□ -0.04
SNX1-209ENST00000559961 MROH7Q68CQ1 1323 aa14.81□□□□□ -0.04
SNX1-209ENST00000559961 CCDC171Q6TFL3 1326 aa14.81□□□□□ -0.04
SNX1-209ENST00000559961 A0A0D9SFI3 127 aa14.8□□□□□ -0.04
SNX1-209ENST00000559961 A0A1W2PQ45 241 aaPredicted RBP14.8□□□□□ -0.04
SNX1-209ENST00000559961 A0A1W2PQY0 241 aa14.8□□□□□ -0.04
SNX1-209ENST00000559961 B4DLN1 442 aa14.8□□□□□ -0.04
SNX1-209ENST00000559961 NMT2O60551 498 aa14.8□□□□□ -0.04
SNX1-209ENST00000559961 MRPL12P52815 198 aaKnown RBP14.8□□□□□ -0.04
SNX1-209ENST00000559961 ACLYP53396 1101 aa14.8□□□□□ -0.04
SNX1-209ENST00000559961 SNX17Q15036 470 aa14.8□□□□□ -0.04
SNX1-209ENST00000559961 KCNA10Q16322 511 aa14.8□□□□□ -0.04
SNX1-209ENST00000559961 CCDC144BQ3MJ40 725 aa14.8□□□□□ -0.04
SNX1-209ENST00000559961 GNASQ5JWF2 1037 aa14.8□□□□□ -0.04
SNX1-209ENST00000559961 AKNAD1Q5T1N1 836 aa14.8□□□□□ -0.04
SNX1-209ENST00000559961 NSMFQ6X4W1 530 aa14.8□□□□□ -0.04
SNX1-209ENST00000559961 IQCA1Q86XH1 822 aa14.8□□□□□ -0.04
SNX1-209ENST00000559961 SMC5Q8IY18 1101 aa14.8□□□□□ -0.04
SNX1-209ENST00000559961 CCDC144CPQ8IYA2 1237 aa14.8□□□□□ -0.04
SNX1-209ENST00000559961 SLC17A8Q8NDX2 589 aa14.8□□□□□ -0.04
SNX1-209ENST00000559961 INCENPQ9NQS7 918 aa14.8□□□□□ -0.04
SNX1-209ENST00000559961 IL17RBQ9NRM6 502 aa14.8□□□□□ -0.04
SNX1-209ENST00000559961 TCP11L1Q9NUJ3 509 aa14.8□□□□□ -0.04
SNX1-209ENST00000559961 ADD3Q9UEY8 706 aaKnown RBP14.8□□□□□ -0.04
SNX1-209ENST00000559961 PRR12Q9ULL5 1215 aa14.8□□□□□ -0.04
SNX1-209ENST00000559961 A0A0G2JMZ2 1700 aa14.79□□□□□ -0.04
SNX1-209ENST00000559961 TLR3O15455 904 aaKnown RBP14.79□□□□□ -0.04
SNX1-209ENST00000559961 ZMYM6O95789 1325 aa14.79□□□□□ -0.04
SNX1-209ENST00000559961 SDSP20132 328 aa14.79□□□□□ -0.04
SNX1-209ENST00000559961 HAND2P61296 217 aa14.79□□□□□ -0.04
SNX1-209ENST00000559961 NUCB1Q02818 461 aa14.79□□□□□ -0.04
SNX1-209ENST00000559961 TNFAIP2Q03169 654 aa14.79□□□□□ -0.04
SNX1-209ENST00000559961 SYDE2Q5VT97 1194 aa14.79□□□□□ -0.04
SNX1-209ENST00000559961 BADQ92934 168 aa14.79□□□□□ -0.04
SNX1-209ENST00000559961 TOX2Q96NM4 488 aa14.79□□□□□ -0.04
SNX1-209ENST00000559961 CTNNA3Q9UI47 895 aa14.79□□□□□ -0.04
SNX1-209ENST00000559961 SYNRGQ9UMZ2 1314 aa14.79□□□□□ -0.04
SNX1-209ENST00000559961 ELP1O95163 1332 aa14.78□□□□□ -0.04
SNX1-209ENST00000559961 ADAMTS4O75173 837 aa14.78□□□□□ -0.04
SNX1-209ENST00000559961 ICAM1P05362 532 aa14.78□□□□□ -0.04
SNX1-209ENST00000559961 FGRP09769 529 aa14.78□□□□□ -0.04
SNX1-209ENST00000559961 CWC27Q6UX04 472 aaKnown RBP14.78□□□□□ -0.04
SNX1-209ENST00000559961 TMEM47Q9BQJ4 181 aa14.78□□□□□ -0.04
SNX1-209ENST00000559961 GPCPD1Q9NPB8 672 aa14.78□□□□□ -0.04
SNX1-209ENST00000559961 A1CFQ9NQ94 594 aaKnown RBP14.78□□□□□ -0.04
SNX1-209ENST00000559961 PDLIM7Q9NR12 457 aa14.78□□□□□ -0.04
SNX1-209ENST00000559961 A0A0U1RQG5 324 aaPredicted RBP14.77□□□□□ -0.05
SNX1-209ENST00000559961 PTPDC1A2A3K4 754 aa14.77□□□□□ -0.05
SNX1-209ENST00000559961 CABYRO75952 493 aa14.77□□□□□ -0.05
SNX1-209ENST00000559961 ASGR1P07306 291 aa14.77□□□□□ -0.05
SNX1-209ENST00000559961 GJA9P57773 515 aa14.77□□□□□ -0.05
SNX1-209ENST00000559961 SNAP25P60880 206 aa14.77□□□□□ -0.05
SNX1-209ENST00000559961 CNTN2Q02246 1040 aa14.77□□□□□ -0.05
SNX1-209ENST00000559961 IMMTQ16891 758 aaKnown RBP14.77□□□□□ -0.05
SNX1-209ENST00000559961 BRDTQ58F21 947 aaPredicted RBP14.77□□□□□ -0.05
SNX1-209ENST00000559961 ZNF697Q5TEC3 545 aa14.77□□□□□ -0.05
SNX1-209ENST00000559961 IQSEC1Q6DN90 963 aa14.77□□□□□ -0.05
SNX1-209ENST00000559961 FAM133AQ8N9E0 248 aa14.77□□□□□ -0.05
SNX1-209ENST00000559961 KLHDC9Q8NEP7 349 aa14.77□□□□□ -0.05
SNX1-209ENST00000559961 LENG1Q96BZ8 264 aaPredicted RBP14.77□□□□□ -0.05
SNX1-209ENST00000559961 SEZ6LQ9BYH1 1024 aa14.77□□□□□ -0.05
SNX1-209ENST00000559961 OSBPL3Q9H4L5 887 aa14.77□□□□□ -0.05
SNX1-209ENST00000559961 RLFQ13129 1914 aa14.76□□□□□ -0.05
SNX1-209ENST00000559961 FOXP2O15409 715 aa14.76□□□□□ -0.05
SNX1-209ENST00000559961 CST5P28325 142 aaPredicted RBP14.76□□□□□ -0.05
SNX1-209ENST00000559961 SLC16A2P36021 539 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms