RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 KANSL2Q9H9L4 492 aa12.98□□□□□ -0.33
TRAF3-207ENST00000559734 CERS4Q9HA82 394 aa12.98□□□□□ -0.33
TRAF3-207ENST00000559734 SLC4A7Q9Y6M7 1214 aa12.98□□□□□ -0.33
TRAF3-207ENST00000559734 DNAJC25-GNG10A0A024R161 153 aa12.97□□□□□ -0.33
TRAF3-207ENST00000559734 USP17L12C9JPN9 530 aa12.97□□□□□ -0.33
TRAF3-207ENST00000559734 USP17L21D6R901 530 aa12.97□□□□□ -0.33
TRAF3-207ENST00000559734 RFXAPO00287 272 aa12.97□□□□□ -0.33
TRAF3-207ENST00000559734 GTPBP6O43824 516 aaPredicted RBP12.97□□□□□ -0.33
TRAF3-207ENST00000559734 CD4P01730 458 aa12.97□□□□□ -0.33
TRAF3-207ENST00000559734 C12orf60Q5U649 245 aa12.97□□□□□ -0.33
TRAF3-207ENST00000559734 ARMCX2Q7L311 632 aa12.97□□□□□ -0.33
TRAF3-207ENST00000559734 ERC1Q8IUD2 1116 aa12.97□□□□□ -0.33
TRAF3-207ENST00000559734 FTSJ3Q8IY81 847 aaKnown RBP12.97□□□□□ -0.33
TRAF3-207ENST00000559734 STK11IPQ8N1F8 1099 aa12.97□□□□□ -0.33
TRAF3-207ENST00000559734 DDRGK1Q96HY6 314 aa12.97□□□□□ -0.33
TRAF3-207ENST00000559734 RAVER2Q9HCJ3 691 aaKnown RBP12.97□□□□□ -0.33
TRAF3-207ENST00000559734 ATP8A2Q9NTI2 1148 aa12.97□□□□□ -0.33
TRAF3-207ENST00000559734 GBF1Q92538 1859 aa12.96□□□□□ -0.33
TRAF3-207ENST00000559734 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.96□□□□□ -0.33
TRAF3-207ENST00000559734 TCRBV5S4A2TA0A5A2 114 aa12.96□□□□□ -0.33
TRAF3-207ENST00000559734 ZBED4O75132 1171 aa12.96□□□□□ -0.33
TRAF3-207ENST00000559734 C16orf86Q6ZW13 317 aa12.96□□□□□ -0.33
TRAF3-207ENST00000559734 ZNF467Q7Z7K2 595 aaPredicted RBP12.96□□□□□ -0.33
TRAF3-207ENST00000559734 KIFC2Q96AC6 838 aa12.96□□□□□ -0.33
TRAF3-207ENST00000559734 SCLYQ96I15 445 aa12.96□□□□□ -0.33
TRAF3-207ENST00000559734 HOMER2Q9NSB8 354 aa12.96□□□□□ -0.33
TRAF3-207ENST00000559734 ISY1Q9ULR0 285 aaKnown RBP12.96□□□□□ -0.33
TRAF3-207ENST00000559734 FAM86C2PA6NEL3 165 aa12.95□□□□□ -0.34
TRAF3-207ENST00000559734 ERC2O15083 957 aa12.95□□□□□ -0.34
TRAF3-207ENST00000559734 B4GALT4O60513 344 aa12.95□□□□□ -0.34
TRAF3-207ENST00000559734 ATP2A2P16615 1042 aaKnown RBP12.95□□□□□ -0.34
TRAF3-207ENST00000559734 ITGA7Q13683 1181 aa12.95□□□□□ -0.34
TRAF3-207ENST00000559734 TMEM31Q5JXX7 168 aa12.95□□□□□ -0.34
TRAF3-207ENST00000559734 CCDC144CPQ8IYA2 1237 aa12.95□□□□□ -0.34
TRAF3-207ENST00000559734 FGD4Q96M96 766 aa12.95□□□□□ -0.34
TRAF3-207ENST00000559734 TRPV6Q9H1D0 765 aa12.95□□□□□ -0.34
TRAF3-207ENST00000559734 WNT8AQ9H1J5 351 aa12.95□□□□□ -0.34
TRAF3-207ENST00000559734 PCDHA11Q9Y5I1 949 aa12.95□□□□□ -0.34
TRAF3-207ENST00000559734 SLC4A4Q9Y6R1 1079 aa12.95□□□□□ -0.34
TRAF3-207ENST00000559734 MYO9BQ13459 2157 aa12.94□□□□□ -0.34
TRAF3-207ENST00000559734 CTAGE5O15320 804 aa12.94□□□□□ -0.34
TRAF3-207ENST00000559734 NDUFB10O96000 172 aa12.94□□□□□ -0.34
TRAF3-207ENST00000559734 CA3P07451 260 aa12.94□□□□□ -0.34
TRAF3-207ENST00000559734 PTGS1P23219 599 aa12.94□□□□□ -0.34
TRAF3-207ENST00000559734 PSMC6P62333 389 aa12.94□□□□□ -0.34
TRAF3-207ENST00000559734 TNFAIP2Q03169 654 aa12.94□□□□□ -0.34
TRAF3-207ENST00000559734 FSCN1Q16658 493 aaKnown RBP12.94□□□□□ -0.34
TRAF3-207ENST00000559734 KRT40Q6A162 431 aa12.94□□□□□ -0.34
TRAF3-207ENST00000559734 CEP85Q6P2H3 762 aa12.94□□□□□ -0.34
TRAF3-207ENST00000559734 TLK2Q86UE8 772 aa12.94□□□□□ -0.34
TRAF3-207ENST00000559734 RPUSD2Q8IZ73 545 aaKnown RBP12.94□□□□□ -0.34
TRAF3-207ENST00000559734 PRPF38AQ8NAV1 312 aaKnown RBP12.94□□□□□ -0.34
TRAF3-207ENST00000559734 NOC4LQ9BVI4 516 aaKnown RBP12.94□□□□□ -0.34
TRAF3-207ENST00000559734 AP5M1Q9H0R1 490 aa12.94□□□□□ -0.34
TRAF3-207ENST00000559734 BAZ2AQ9UIF9 1905 aaKnown RBP12.94□□□□□ -0.34
TRAF3-207ENST00000559734 ASTN1O14525 1302 aa12.93□□□□□ -0.34
TRAF3-207ENST00000559734 F5H6K3 240 aa12.93□□□□□ -0.34
TRAF3-207ENST00000559734 CABYRO75952 493 aa12.93□□□□□ -0.34
TRAF3-207ENST00000559734 IFIT2P09913 472 aaKnown RBP12.93□□□□□ -0.34
TRAF3-207ENST00000559734 ADD2P35612 726 aa12.93□□□□□ -0.34
TRAF3-207ENST00000559734 CNTN2Q02246 1040 aa12.93□□□□□ -0.34
TRAF3-207ENST00000559734 KLRC3Q07444 240 aa12.93□□□□□ -0.34
TRAF3-207ENST00000559734 TMEM67Q5HYA8 995 aa12.93□□□□□ -0.34
TRAF3-207ENST00000559734 DEFB128Q7Z7B8 93 aa12.93□□□□□ -0.34
TRAF3-207ENST00000559734 RHPN1Q8TCX5 695 aa12.93□□□□□ -0.34
TRAF3-207ENST00000559734 ARNTL2Q8WYA1 636 aa12.93□□□□□ -0.34
TRAF3-207ENST00000559734 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.93□□□□□ -0.34
TRAF3-207ENST00000559734 FBXO40Q9UH90 709 aa12.93□□□□□ -0.34
TRAF3-207ENST00000559734 MTCH2Q9Y6C9 303 aa12.93□□□□□ -0.34
TRAF3-207ENST00000559734 DYNC1LI2O43237 492 aaPredicted RBP12.92□□□□□ -0.34
TRAF3-207ENST00000559734 ZEB2O60315 1214 aa12.92□□□□□ -0.34
TRAF3-207ENST00000559734 CHGBP05060 677 aa12.92□□□□□ -0.34
TRAF3-207ENST00000559734 TTLL4Q14679 1199 aa12.92□□□□□ -0.34
TRAF3-207ENST00000559734 CTR9Q6PD62 1173 aa12.92□□□□□ -0.34
TRAF3-207ENST00000559734 EEPD1Q7L9B9 569 aa12.92□□□□□ -0.34
TRAF3-207ENST00000559734 CLASRPQ8N2M8 674 aaKnown RBP12.92□□□□□ -0.34
TRAF3-207ENST00000559734 SLC43A3Q8NBI5 491 aa12.92□□□□□ -0.34
TRAF3-207ENST00000559734 CHST13Q8NET6 341 aa12.92□□□□□ -0.34
TRAF3-207ENST00000559734 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.92□□□□□ -0.34
TRAF3-207ENST00000559734 KATNBL1Q9H079 304 aa12.92□□□□□ -0.34
TRAF3-207ENST00000559734 BOLA2Q9H3K6 86 aa12.92□□□□□ -0.34
TRAF3-207ENST00000559734 MKNK2Q9HBH9 465 aa12.92□□□□□ -0.34
TRAF3-207ENST00000559734 PAG1Q9NWQ8 432 aa12.92□□□□□ -0.34
TRAF3-207ENST00000559734 GRIN2DO15399 1336 aa12.91□□□□□ -0.34
TRAF3-207ENST00000559734 LRRC37A2A6NM11 1700 aa12.91□□□□□ -0.34
TRAF3-207ENST00000559734 EPOPA6NHQ4 379 aa12.91□□□□□ -0.34
TRAF3-207ENST00000559734 ATP2A1O14983 1001 aa12.91□□□□□ -0.34
TRAF3-207ENST00000559734 CYP2C9P11712 490 aa12.91□□□□□ -0.34
TRAF3-207ENST00000559734 HSP90AB4PQ58FF6 505 aa12.91□□□□□ -0.34
TRAF3-207ENST00000559734 LRRC47Q8N1G4 583 aaKnown RBP12.91□□□□□ -0.34
TRAF3-207ENST00000559734 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.91□□□□□ -0.34
TRAF3-207ENST00000559734 CHMP4CQ96CF2 233 aa12.91□□□□□ -0.34
TRAF3-207ENST00000559734 ACAD9Q9H845 621 aa12.91□□□□□ -0.34
TRAF3-207ENST00000559734 SLC38A10Q9HBR0 1119 aa12.91□□□□□ -0.34
TRAF3-207ENST00000559734 ARPP21Q9UBL0 812 aaPredicted RBP12.91□□□□□ -0.34
TRAF3-207ENST00000559734 CLIP2Q9UDT6 1046 aa12.91□□□□□ -0.34
TRAF3-207ENST00000559734 COG5Q9UP83 839 aa12.91□□□□□ -0.34
TRAF3-207ENST00000559734 DDX49Q9Y6V7 483 aaKnown RBP12.91□□□□□ -0.34
TRAF3-207ENST00000559734 MCM3APO60318 1980 aa12.9□□□□□ -0.34
TRAF3-207ENST00000559734 TLL1O43897 1013 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms