RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 ESR2Q92731 530 aa20.93■□□□□ 0.94
TPM1-218ENST00000559281 HOMER2Q9NSB8 354 aa20.93■□□□□ 0.94
TPM1-218ENST00000559281 PRR12Q9ULL5 1215 aa20.93■□□□□ 0.94
TPM1-218ENST00000559281 TAL1P17542 331 aaPredicted RBP20.92■□□□□ 0.94
TPM1-218ENST00000559281 MAGEA10P43363 369 aaPredicted RBP20.92■□□□□ 0.94
TPM1-218ENST00000559281 SLC39A5Q6ZMH5 540 aa20.92■□□□□ 0.94
TPM1-218ENST00000559281 AGBL1Q96MI9 1066 aa20.92■□□□□ 0.94
TPM1-218ENST00000559281 TMEM47Q9BQJ4 181 aa20.92■□□□□ 0.94
TPM1-218ENST00000559281 RNF146Q9NTX7 359 aa20.92■□□□□ 0.94
TPM1-218ENST00000559281 POTEB2H3BUK9 544 aa20.91■□□□□ 0.94
TPM1-218ENST00000559281 SNAI1O95863 264 aaPredicted RBP20.91■□□□□ 0.94
TPM1-218ENST00000559281 ALAS1P13196 640 aa20.91■□□□□ 0.94
TPM1-218ENST00000559281 ADCYAP1R1P41586 468 aa20.91■□□□□ 0.94
TPM1-218ENST00000559281 CCDC178Q5BJE1 867 aa20.91■□□□□ 0.94
TPM1-218ENST00000559281 CCDC174Q6PII3 467 aa20.91■□□□□ 0.94
TPM1-218ENST00000559281 TRERF1Q96PN7 1200 aa20.91■□□□□ 0.94
TPM1-218ENST00000559281 LBHD1Q9BQE6 289 aaPredicted RBP20.91■□□□□ 0.94
TPM1-218ENST00000559281 UBE2OQ9C0C9 1292 aaKnown RBP20.91■□□□□ 0.94
TPM1-218ENST00000559281 ABHD16BQ9H3Z7 469 aa20.91■□□□□ 0.94
TPM1-218ENST00000559281 CTNNA3Q9UI47 895 aa20.91■□□□□ 0.94
TPM1-218ENST00000559281 ZHX1Q9UKY1 873 aaPredicted RBP20.91■□□□□ 0.94
TPM1-218ENST00000559281 ZNF536O15090 1300 aa20.9■□□□□ 0.94
TPM1-218ENST00000559281 RTP1P59025 263 aa20.9■□□□□ 0.94
TPM1-218ENST00000559281 ACVR2BQ13705 512 aa20.9■□□□□ 0.94
TPM1-218ENST00000559281 DSCC1Q9BVC3 393 aa20.9■□□□□ 0.94
TPM1-218ENST00000559281 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.9■□□□□ 0.94
TPM1-218ENST00000559281 PNMA2Q9UL42 364 aa20.9■□□□□ 0.94
TPM1-218ENST00000559281 ATP11BQ9Y2G3 1177 aa20.9■□□□□ 0.94
TPM1-218ENST00000559281 PARP14Q460N5 1801 aa20.9■□□□□ 0.94
TPM1-218ENST00000559281 PGK1P00558 417 aa20.89■□□□□ 0.93
TPM1-218ENST00000559281 IMMTQ16891 758 aaKnown RBP20.89■□□□□ 0.93
TPM1-218ENST00000559281 BTNL9Q6UXG8 535 aa20.89■□□□□ 0.93
TPM1-218ENST00000559281 IQCA1Q86XH1 822 aa20.89■□□□□ 0.93
TPM1-218ENST00000559281 FERMT2Q96AC1 680 aa20.89■□□□□ 0.93
TPM1-218ENST00000559281 TSEN34Q9BSV6 310 aaKnown RBP20.89■□□□□ 0.93
TPM1-218ENST00000559281 SPC25Q9HBM1 224 aa20.89■□□□□ 0.93
TPM1-218ENST00000559281 CCPG1Q9ULG6 757 aa20.89■□□□□ 0.93
TPM1-218ENST00000559281 PHF24Q9UPV7 400 aa20.89■□□□□ 0.93
TPM1-218ENST00000559281 ASB14A6NK59 587 aa20.88■□□□□ 0.93
TPM1-218ENST00000559281 ICAM1P05362 532 aa20.88■□□□□ 0.93
TPM1-218ENST00000559281 SYDE2Q5VT97 1194 aa20.88■□□□□ 0.93
TPM1-218ENST00000559281 C1orf53Q5VUE5 145 aa20.88■□□□□ 0.93
TPM1-218ENST00000559281 ARMCX2Q7L311 632 aa20.88■□□□□ 0.93
TPM1-218ENST00000559281 DGKHQ86XP1 1220 aa20.88■□□□□ 0.93
TPM1-218ENST00000559281 TBC1D10CQ8IV04 446 aa20.88■□□□□ 0.93
TPM1-218ENST00000559281 A1CFQ9NQ94 594 aaKnown RBP20.88■□□□□ 0.93
TPM1-218ENST00000559281 COL11A1P12107 1806 aaPredicted RBP20.88■□□□□ 0.93
TPM1-218ENST00000559281 MYH4Q9Y623 1939 aa20.87■□□□□ 0.93
TPM1-218ENST00000559281 DUSP11O75319 330 aaKnown RBP20.87■□□□□ 0.93
TPM1-218ENST00000559281 SLC16A2P36021 539 aa20.87■□□□□ 0.93
TPM1-218ENST00000559281 SNAP25P60880 206 aa20.87■□□□□ 0.93
TPM1-218ENST00000559281 SNX17Q15036 470 aa20.87■□□□□ 0.93
TPM1-218ENST00000559281 TTBK2Q6IQ55 1244 aa20.87■□□□□ 0.93
TPM1-218ENST00000559281 TDHQ8IZJ6 230 aa20.87■□□□□ 0.93
TPM1-218ENST00000559281 FAM133AQ8N9E0 248 aa20.87■□□□□ 0.93
TPM1-218ENST00000559281 RANBP17Q9H2T7 1088 aaKnown RBP20.87■□□□□ 0.93
TPM1-218ENST00000559281 GPCPD1Q9NPB8 672 aa20.87■□□□□ 0.93
TPM1-218ENST00000559281 FRMPD2Q68DX3 1309 aaPredicted RBP20.86■□□□□ 0.93
TPM1-218ENST00000559281 PDHBP11177 359 aa20.86■□□□□ 0.93
TPM1-218ENST00000559281 MDM2Q00987 491 aaPredicted RBP20.86■□□□□ 0.93
TPM1-218ENST00000559281 CNTN2Q02246 1040 aa20.86■□□□□ 0.93
TPM1-218ENST00000559281 CCDC144CPQ8IYA2 1237 aa20.86■□□□□ 0.93
TPM1-218ENST00000559281 NUP133Q8WUM0 1156 aa20.86■□□□□ 0.93
TPM1-218ENST00000559281 MOXD2PA6NHM9 499 aa20.85■□□□□ 0.93
TPM1-218ENST00000559281 ADAMTS4O75173 837 aa20.85■□□□□ 0.93
TPM1-218ENST00000559281 ZNF543Q08ER8 600 aa20.85■□□□□ 0.93
TPM1-218ENST00000559281 CCDC144BQ3MJ40 725 aa20.85■□□□□ 0.93
TPM1-218ENST00000559281 TRIM60Q495X7 471 aa20.85■□□□□ 0.93
TPM1-218ENST00000559281 GPATCH4Q5T3I0 446 aaKnown RBP20.85■□□□□ 0.93
TPM1-218ENST00000559281 TTC22Q5TAA0 569 aa20.85■□□□□ 0.93
TPM1-218ENST00000559281 RASGRP2Q7LDG7 609 aa20.85■□□□□ 0.93
TPM1-218ENST00000559281 RUFY2Q8WXA3 655 aa20.85■□□□□ 0.93
TPM1-218ENST00000559281 FGD4Q96M96 766 aa20.85■□□□□ 0.93
TPM1-218ENST00000559281 KRT23Q9C075 422 aa20.85■□□□□ 0.93
TPM1-218ENST00000559281 CNNM2Q9H8M5 875 aa20.85■□□□□ 0.93
TPM1-218ENST00000559281 CYP39A1Q9NYL5 469 aa20.85■□□□□ 0.93
TPM1-218ENST00000559281 RANBP2P49792 3224 aaKnown RBP20.84■□□□□ 0.93
TPM1-218ENST00000559281 NEDD4P46934 1319 aa20.84■□□□□ 0.93
TPM1-218ENST00000559281 KDM4AO75164 1064 aa20.84■□□□□ 0.93
TPM1-218ENST00000559281 PDE4AP27815 886 aa20.84■□□□□ 0.93
TPM1-218ENST00000559281 IRX6P78412 446 aaPredicted RBP20.84■□□□□ 0.93
TPM1-218ENST00000559281 LRIT3Q3SXY7 679 aa20.84■□□□□ 0.93
TPM1-218ENST00000559281 MUM1L1Q5H9M0 696 aa20.84■□□□□ 0.93
TPM1-218ENST00000559281 NSMFQ6X4W1 530 aa20.84■□□□□ 0.93
TPM1-218ENST00000559281 PCSK9Q8NBP7 692 aaKnown RBP20.84■□□□□ 0.93
TPM1-218ENST00000559281 ZKSCAN3Q9BRR0 538 aa20.84■□□□□ 0.93
TPM1-218ENST00000559281 ZNFX1Q9P2E3 1918 aaKnown RBP20.84■□□□□ 0.93
TPM1-218ENST00000559281 SYNRGQ9UMZ2 1314 aa20.83■□□□□ 0.93
TPM1-218ENST00000559281 ALPK3Q96L96 1907 aa20.83■□□□□ 0.93
TPM1-218ENST00000559281 A0A1W2PQ45 241 aaPredicted RBP20.83■□□□□ 0.93
TPM1-218ENST00000559281 A0A1W2PQY0 241 aa20.83■□□□□ 0.93
TPM1-218ENST00000559281 SOWAHBA6NEL2 793 aa20.83■□□□□ 0.93
TPM1-218ENST00000559281 SNHG28P0DPA3 235 aa20.83■□□□□ 0.93
TPM1-218ENST00000559281 ACLYP53396 1101 aa20.83■□□□□ 0.93
TPM1-218ENST00000559281 KCNA10Q16322 511 aa20.83■□□□□ 0.93
TPM1-218ENST00000559281 KLHDC9Q8NEP7 349 aa20.83■□□□□ 0.93
TPM1-218ENST00000559281 LENG1Q96BZ8 264 aaPredicted RBP20.83■□□□□ 0.93
TPM1-218ENST00000559281 KAT14Q9H8E8 782 aa20.83■□□□□ 0.93
TPM1-218ENST00000559281 PRDM5Q9NQX1 630 aaPredicted RBP20.83■□□□□ 0.93
TPM1-218ENST00000559281 STARD7Q9NQZ5 370 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms