RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 ZNF543Q08ER8 600 aa12.75□□□□□ -0.37
CLPX-204ENST00000559152 GRIPAP1Q4V328 841 aa12.75□□□□□ -0.37
CLPX-204ENST00000559152 NYAP1Q6ZVC0 841 aa12.75□□□□□ -0.37
CLPX-204ENST00000559152 FCHSD1Q86WN1 690 aa12.75□□□□□ -0.37
CLPX-204ENST00000559152 IDI2Q9BXS1 227 aa12.75□□□□□ -0.37
CLPX-204ENST00000559152 PI4KBQ9UBF8 816 aa12.75□□□□□ -0.37
CLPX-204ENST00000559152 SERPINA10Q9UK55 444 aa12.75□□□□□ -0.37
CLPX-204ENST00000559152 PNMA6FA0A0J9YX94 578 aa12.74□□□□□ -0.37
CLPX-204ENST00000559152 RRP9O43818 475 aaKnown RBP12.74□□□□□ -0.37
CLPX-204ENST00000559152 CCNT1O60563 726 aaKnown RBP12.74□□□□□ -0.37
CLPX-204ENST00000559152 RPN1P04843 607 aaKnown RBP12.74□□□□□ -0.37
CLPX-204ENST00000559152 ADCY7P51828 1080 aa12.74□□□□□ -0.37
CLPX-204ENST00000559152 SPAG1Q07617 926 aa12.74□□□□□ -0.37
CLPX-204ENST00000559152 NR1I3Q14994 352 aa12.74□□□□□ -0.37
CLPX-204ENST00000559152 LETM2Q2VYF4 491 aa12.74□□□□□ -0.37
CLPX-204ENST00000559152 TRMT44Q8IYL2 757 aaKnown RBP12.74□□□□□ -0.37
CLPX-204ENST00000559152 ANKRD20A12PQ8NF67 263 aa12.74□□□□□ -0.37
CLPX-204ENST00000559152 CCDC47Q96A33 483 aaKnown RBP12.74□□□□□ -0.37
CLPX-204ENST00000559152 MXD3Q9BW11 206 aa12.74□□□□□ -0.37
CLPX-204ENST00000559152 UBA5Q9GZZ9 404 aa12.74□□□□□ -0.37
CLPX-204ENST00000559152 GLT8D2Q9H1C3 349 aa12.74□□□□□ -0.37
CLPX-204ENST00000559152 DBNDD1Q9H9R9 158 aa12.74□□□□□ -0.37
CLPX-204ENST00000559152 RWDD2AQ9UIY3 292 aa12.74□□□□□ -0.37
CLPX-204ENST00000559152 A0A1B0GTH6 734 aa12.74□□□□□ -0.37
CLPX-204ENST00000559152 TBX2Q13207 712 aaPredicted RBP12.74□□□□□ -0.37
CLPX-204ENST00000559152 KCNB1Q14721 858 aa12.74□□□□□ -0.37
CLPX-204ENST00000559152 KARSQ15046 597 aaKnown RBP12.74□□□□□ -0.37
CLPX-204ENST00000559152 EZH2Q15910 746 aaKnown RBP12.74□□□□□ -0.37
CLPX-204ENST00000559152 DACT2Q5SW24 774 aa12.74□□□□□ -0.37
CLPX-204ENST00000559152 LRRC47Q8N1G4 583 aaKnown RBP12.74□□□□□ -0.37
CLPX-204ENST00000559152 TRIM34Q9BYJ4 488 aa12.74□□□□□ -0.37
CLPX-204ENST00000559152 TMEM60Q9H2L4 133 aa12.74□□□□□ -0.37
CLPX-204ENST00000559152 CPVLQ9H3G5 476 aa12.74□□□□□ -0.37
CLPX-204ENST00000559152 TMX1Q9H3N1 280 aa12.74□□□□□ -0.37
CLPX-204ENST00000559152 SAMSN1Q9NSI8 373 aaKnown RBP12.74□□□□□ -0.37
CLPX-204ENST00000559152 FRMPD2Q68DX3 1309 aaPredicted RBP12.74□□□□□ -0.37
CLPX-204ENST00000559152 MPHOSPH10O00566 681 aaKnown RBP12.73□□□□□ -0.37
CLPX-204ENST00000559152 ECE2O60344 883 aa12.73□□□□□ -0.37
CLPX-204ENST00000559152 AMPD3Q01432 767 aa12.73□□□□□ -0.37
CLPX-204ENST00000559152 STIM1Q13586 685 aa12.73□□□□□ -0.37
CLPX-204ENST00000559152 CDKAL1Q5VV42 579 aa12.73□□□□□ -0.37
CLPX-204ENST00000559152 MSL1Q68DK7 614 aa12.73□□□□□ -0.37
CLPX-204ENST00000559152 KLHL10Q6JEL2 608 aa12.73□□□□□ -0.37
CLPX-204ENST00000559152 TBCKQ8TEA7 893 aa12.73□□□□□ -0.37
CLPX-204ENST00000559152 RAB34Q9BZG1 259 aa12.73□□□□□ -0.37
CLPX-204ENST00000559152 BLZF1Q9H2G9 400 aa12.73□□□□□ -0.37
CLPX-204ENST00000559152 COL11A2P13942 1736 aaPredicted RBP12.73□□□□□ -0.37
CLPX-204ENST00000559152 RGPD3A6NKT7 1758 aaPredicted RBP12.73□□□□□ -0.37
CLPX-204ENST00000559152 RGPD4Q7Z3J3 1758 aa12.73□□□□□ -0.37
CLPX-204ENST00000559152 RIOK3O14730 519 aaKnown RBP12.73□□□□□ -0.37
CLPX-204ENST00000559152 ARHGAP6O43182 974 aa12.73□□□□□ -0.37
CLPX-204ENST00000559152 CD44P16070 742 aaKnown RBP12.73□□□□□ -0.37
CLPX-204ENST00000559152 PPP1R2P41236 205 aa12.73□□□□□ -0.37
CLPX-204ENST00000559152 RBM5P52756 815 aaKnown RBP eCLIP12.73□□□□□ -0.37
CLPX-204ENST00000559152 MRPL12P52815 198 aaKnown RBP12.73□□□□□ -0.37
CLPX-204ENST00000559152 PAK1Q13153 545 aa12.73□□□□□ -0.37
CLPX-204ENST00000559152 CABP7Q86V35 215 aa12.73□□□□□ -0.37
CLPX-204ENST00000559152 KIF18AQ8NI77 898 aa12.73□□□□□ -0.37
CLPX-204ENST00000559152 MKL1Q969V6 931 aa12.73□□□□□ -0.37
CLPX-204ENST00000559152 MED15Q96RN5 788 aa12.73□□□□□ -0.37
CLPX-204ENST00000559152 NAP1L4Q99733 375 aaKnown RBP12.73□□□□□ -0.37
CLPX-204ENST00000559152 KANSL2Q9H9L4 492 aa12.73□□□□□ -0.37
CLPX-204ENST00000559152 KBTBD4Q9NVX7 518 aa12.73□□□□□ -0.37
CLPX-204ENST00000559152 BAZ2BQ9UIF8 2168 aaKnown RBP12.72□□□□□ -0.37
CLPX-204ENST00000559152 TMEM232C9JQI7 657 aa12.72□□□□□ -0.37
CLPX-204ENST00000559152 ZSCAN12O43309 604 aa12.72□□□□□ -0.37
CLPX-204ENST00000559152 CASP1P29466 404 aa12.72□□□□□ -0.37
CLPX-204ENST00000559152 TMEM266Q2M3C6 531 aa12.72□□□□□ -0.37
CLPX-204ENST00000559152 E4F1Q66K89 784 aaPredicted RBP12.72□□□□□ -0.37
CLPX-204ENST00000559152 KIAA0825Q8IV33 1275 aa12.72□□□□□ -0.37
CLPX-204ENST00000559152 STAMQ92783 540 aa12.72□□□□□ -0.37
CLPX-204ENST00000559152 CALML4Q96GE6 196 aa12.72□□□□□ -0.37
CLPX-204ENST00000559152 MTRQ99707 1265 aa12.72□□□□□ -0.37
CLPX-204ENST00000559152 GPCPD1Q9NPB8 672 aa12.72□□□□□ -0.37
CLPX-204ENST00000559152 RIC8AQ9NPQ8 531 aa12.72□□□□□ -0.37
CLPX-204ENST00000559152 INTS13Q9NVM9 706 aa12.72□□□□□ -0.37
CLPX-204ENST00000559152 STK32BQ9NY57 414 aa12.72□□□□□ -0.37
CLPX-204ENST00000559152 NYAP2Q9P242 653 aa12.72□□□□□ -0.37
CLPX-204ENST00000559152 BIN2Q9UBW5 565 aaPredicted RBP12.72□□□□□ -0.37
CLPX-204ENST00000559152 STX10O60499 249 aa12.72□□□□□ -0.37
CLPX-204ENST00000559152 EIF6P56537 245 aaKnown RBP12.72□□□□□ -0.37
CLPX-204ENST00000559152 NFIAQ12857 509 aa12.72□□□□□ -0.37
CLPX-204ENST00000559152 SF3B2Q13435 895 aaKnown RBP12.72□□□□□ -0.37
CLPX-204ENST00000559152 SLC15A2Q16348 729 aa12.72□□□□□ -0.37
CLPX-204ENST00000559152 CCDC96Q2M329 555 aa12.72□□□□□ -0.37
CLPX-204ENST00000559152 CERKLQ49MI3 558 aaPredicted RBP12.72□□□□□ -0.37
CLPX-204ENST00000559152 RASGRP2Q7LDG7 609 aa12.72□□□□□ -0.37
CLPX-204ENST00000559152 ADGRF4Q8IZF3 695 aa12.72□□□□□ -0.37
CLPX-204ENST00000559152 DCAF4Q8WV16 495 aa12.72□□□□□ -0.37
CLPX-204ENST00000559152 CUL5Q93034 780 aa12.72□□□□□ -0.37
CLPX-204ENST00000559152 JMJD4Q9H9V9 463 aa12.72□□□□□ -0.37
CLPX-204ENST00000559152 TRMT1Q9NXH9 659 aaKnown RBP12.72□□□□□ -0.37
CLPX-204ENST00000559152 CTNND2Q9UQB3 1225 aa12.72□□□□□ -0.37
CLPX-204ENST00000559152 GOLGA6L9A6NEM1 432 aa12.71□□□□□ -0.37
CLPX-204ENST00000559152 USP27XA6NNY8 438 aa12.71□□□□□ -0.37
CLPX-204ENST00000559152 H7C1D1 291 aa12.71□□□□□ -0.37
CLPX-204ENST00000559152 ZBTB5O15062 677 aa12.71□□□□□ -0.37
CLPX-204ENST00000559152 CDC25AP30304 524 aa12.71□□□□□ -0.37
CLPX-204ENST00000559152 HOXA7P31268 230 aaPredicted RBP12.71□□□□□ -0.37
CLPX-204ENST00000559152 HSP90AA2PQ14568 343 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms