RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 ADCY6O43306 1168 aa8.2□□□□□ -1.1
LRRC28-207ENST00000558500 ATP2A2P16615 1042 aaKnown RBP8.2□□□□□ -1.1
LRRC28-207ENST00000558500 COPB2P35606 906 aa8.2□□□□□ -1.1
LRRC28-207ENST00000558500 MRE11P49959 708 aa8.2□□□□□ -1.1
LRRC28-207ENST00000558500 CCL23P55773 120 aa8.2□□□□□ -1.1
LRRC28-207ENST00000558500 ACVR2BQ13705 512 aa8.2□□□□□ -1.1
LRRC28-207ENST00000558500 MAMDC4Q6UXC1 1216 aa8.2□□□□□ -1.1
LRRC28-207ENST00000558500 MAMSTRQ6ZN01 415 aa8.2□□□□□ -1.1
LRRC28-207ENST00000558500 CLEC10AQ8IUN9 316 aa8.2□□□□□ -1.1
LRRC28-207ENST00000558500 MAGEB6Q8N7X4 407 aa8.2□□□□□ -1.1
LRRC28-207ENST00000558500 SLC43A3Q8NBI5 491 aa8.2□□□□□ -1.1
LRRC28-207ENST00000558500 REPS2Q8NFH8 660 aa8.2□□□□□ -1.1
LRRC28-207ENST00000558500 HLA-CQ95604 372 aa8.2□□□□□ -1.1
LRRC28-207ENST00000558500 RIOK1Q9BRS2 568 aaKnown RBP8.2□□□□□ -1.1
LRRC28-207ENST00000558500 HIPK3Q9H422 1215 aa8.2□□□□□ -1.1
LRRC28-207ENST00000558500 SH2D4AQ9H788 454 aa8.2□□□□□ -1.1
LRRC28-207ENST00000558500 ARHGEF10LQ9HCE6 1279 aa8.2□□□□□ -1.1
LRRC28-207ENST00000558500 FBXO28Q9NVF7 368 aa8.2□□□□□ -1.1
LRRC28-207ENST00000558500 ZNF214Q9UL59 606 aaPredicted RBP8.2□□□□□ -1.1
LRRC28-207ENST00000558500 PNMA6EA0A0J9YXQ4 647 aa8.19□□□□□ -1.1
LRRC28-207ENST00000558500 EPOPA6NHQ4 379 aa8.19□□□□□ -1.1
LRRC28-207ENST00000558500 ZBBXA8MT70 800 aa8.19□□□□□ -1.1
LRRC28-207ENST00000558500 PRR33A8MZF0 331 aa8.19□□□□□ -1.1
LRRC28-207ENST00000558500 TULP1O00294 542 aaPredicted RBP8.19□□□□□ -1.1
LRRC28-207ENST00000558500 CTAGE5O15320 804 aa8.19□□□□□ -1.1
LRRC28-207ENST00000558500 CA3P07451 260 aa8.19□□□□□ -1.1
LRRC28-207ENST00000558500 ICA1Q05084 483 aa8.19□□□□□ -1.1
LRRC28-207ENST00000558500 SLFN5Q08AF3 891 aa8.19□□□□□ -1.1
LRRC28-207ENST00000558500 TMEM67Q5HYA8 995 aa8.19□□□□□ -1.1
LRRC28-207ENST00000558500 GNASQ5JWF2 1037 aa8.19□□□□□ -1.1
LRRC28-207ENST00000558500 TMED8Q6PL24 325 aaPredicted RBP8.19□□□□□ -1.1
LRRC28-207ENST00000558500 RPUSD2Q8IZ73 545 aaKnown RBP8.19□□□□□ -1.1
LRRC28-207ENST00000558500 FAM9BQ8IZU0 186 aa8.19□□□□□ -1.1
LRRC28-207ENST00000558500 VWCEQ96DN2 955 aa8.19□□□□□ -1.1
LRRC28-207ENST00000558500 NOC4LQ9BVI4 516 aaKnown RBP8.19□□□□□ -1.1
LRRC28-207ENST00000558500 WNT8AQ9H1J5 351 aa8.19□□□□□ -1.1
LRRC28-207ENST00000558500 CERS4Q9HA82 394 aa8.19□□□□□ -1.1
LRRC28-207ENST00000558500 CD320Q9NPF0 282 aa8.19□□□□□ -1.1
LRRC28-207ENST00000558500 MCM9Q9NXL9 1143 aa8.19□□□□□ -1.1
LRRC28-207ENST00000558500 PPP1R9AQ9ULJ8 1098 aa8.19□□□□□ -1.1
LRRC28-207ENST00000558500 DNAJC25-GNG10A0A024R161 153 aa8.18□□□□□ -1.1
LRRC28-207ENST00000558500 GNAI2P04899 355 aa8.18□□□□□ -1.1
LRRC28-207ENST00000558500 AKR1B1P15121 316 aa8.18□□□□□ -1.1
LRRC28-207ENST00000558500 NKX3-2P78367 333 aa8.18□□□□□ -1.1
LRRC28-207ENST00000558500 CCDC144BQ3MJ40 725 aa8.18□□□□□ -1.1
LRRC28-207ENST00000558500 KRT40Q6A162 431 aa8.18□□□□□ -1.1
LRRC28-207ENST00000558500 DDX11Q96FC9 970 aa8.18□□□□□ -1.1
LRRC28-207ENST00000558500 ABHD16BQ9H3Z7 469 aa8.18□□□□□ -1.1
LRRC28-207ENST00000558500 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.18□□□□□ -1.1
LRRC28-207ENST00000558500 SWAP70Q9UH65 585 aa8.18□□□□□ -1.1
LRRC28-207ENST00000558500 DBNLQ9UJU6 430 aaKnown RBP8.18□□□□□ -1.1
LRRC28-207ENST00000558500 PLXNA1Q9UIW2 1896 aa8.17□□□□□ -1.1
LRRC28-207ENST00000558500 TRANK1O15050 2925 aa8.17□□□□□ -1.1
LRRC28-207ENST00000558500 MYO9BQ13459 2157 aa8.17□□□□□ -1.1
LRRC28-207ENST00000558500 PRRC2BQ5JSZ5 2229 aaKnown RBP8.17□□□□□ -1.1
LRRC28-207ENST00000558500 MAGEB6P1A0A0J9YX57 407 aa8.17□□□□□ -1.1
LRRC28-207ENST00000558500 CABYRO75952 493 aa8.17□□□□□ -1.1
LRRC28-207ENST00000558500 CYP2D6P10635 497 aa8.17□□□□□ -1.1
LRRC28-207ENST00000558500 BEX3Q00994 111 aa8.17□□□□□ -1.1
LRRC28-207ENST00000558500 ITGA7Q13683 1181 aa8.17□□□□□ -1.1
LRRC28-207ENST00000558500 TTLL4Q14679 1199 aa8.17□□□□□ -1.1
LRRC28-207ENST00000558500 CXCL17Q6UXB2 119 aa8.17□□□□□ -1.1
LRRC28-207ENST00000558500 ARNTL2Q8WYA1 636 aa8.17□□□□□ -1.1
LRRC28-207ENST00000558500 DYNLL2Q96FJ2 89 aa8.17□□□□□ -1.1
LRRC28-207ENST00000558500 SCLYQ96I15 445 aa8.17□□□□□ -1.1
LRRC28-207ENST00000558500 TEX13BQ9BXU2 312 aa8.17□□□□□ -1.1
LRRC28-207ENST00000558500 SEZ6LQ9BYH1 1024 aa8.17□□□□□ -1.1
LRRC28-207ENST00000558500 CRNKL1Q9BZJ0 848 aaKnown RBP8.17□□□□□ -1.1
LRRC28-207ENST00000558500 TRPV6Q9H1D0 765 aa8.17□□□□□ -1.1
LRRC28-207ENST00000558500 ANTXR1Q9H6X2 564 aa8.17□□□□□ -1.1
LRRC28-207ENST00000558500 SCUBE2Q9NQ36 999 aa8.17□□□□□ -1.1
LRRC28-207ENST00000558500 TLR7Q9NYK1 1049 aaKnown RBP8.17□□□□□ -1.1
LRRC28-207ENST00000558500 GRIN2DO15399 1336 aa8.17□□□□□ -1.1
LRRC28-207ENST00000558500 FOCADQ5VW36 1801 aa8.17□□□□□ -1.1
LRRC28-207ENST00000558500 ASTN1O14525 1302 aa8.16□□□□□ -1.1
LRRC28-207ENST00000558500 B4GALT4O60513 344 aa8.16□□□□□ -1.1
LRRC28-207ENST00000558500 LPXNO60711 386 aa8.16□□□□□ -1.1
LRRC28-207ENST00000558500 ARHGEF15O94989 841 aa8.16□□□□□ -1.1
LRRC28-207ENST00000558500 PFKMP08237 780 aa8.16□□□□□ -1.1
LRRC28-207ENST00000558500 CT47B1P0C2W7 299 aaPredicted RBP8.16□□□□□ -1.1
LRRC28-207ENST00000558500 EEF2P13639 858 aaKnown RBP8.16□□□□□ -1.1
LRRC28-207ENST00000558500 NHLH1Q02575 133 aa8.16□□□□□ -1.1
LRRC28-207ENST00000558500 TAP1Q03518 808 aa8.16□□□□□ -1.1
LRRC28-207ENST00000558500 GRB10Q13322 594 aa8.16□□□□□ -1.1
LRRC28-207ENST00000558500 OS9Q13438 667 aaPredicted RBP8.16□□□□□ -1.1
LRRC28-207ENST00000558500 FAM83BQ5T0W9 1011 aa8.16□□□□□ -1.1
LRRC28-207ENST00000558500 SNRNP48Q6IEG0 339 aaKnown RBP8.16□□□□□ -1.1
LRRC28-207ENST00000558500 ARMCX2Q7L311 632 aa8.16□□□□□ -1.1
LRRC28-207ENST00000558500 GJD3Q8N144 294 aa8.16□□□□□ -1.1
LRRC28-207ENST00000558500 ARHGAP45Q92619 1136 aa8.16□□□□□ -1.1
LRRC28-207ENST00000558500 CCDC17Q96LX7 622 aa8.16□□□□□ -1.1
LRRC28-207ENST00000558500 FGD4Q96M96 766 aa8.16□□□□□ -1.1
LRRC28-207ENST00000558500 AGBL1Q96MI9 1066 aa8.16□□□□□ -1.1
LRRC28-207ENST00000558500 KATNBL1Q9H079 304 aa8.16□□□□□ -1.1
LRRC28-207ENST00000558500 CCDC8Q9H0W5 538 aaPredicted RBP8.16□□□□□ -1.1
LRRC28-207ENST00000558500 DCP1AQ9NPI6 582 aaPredicted RBP8.16□□□□□ -1.1
LRRC28-207ENST00000558500 RIPK3Q9Y572 518 aa8.16□□□□□ -1.1
LRRC28-207ENST00000558500 TCF20Q9UGU0 1960 aaKnown RBP8.15□□□□□ -1.1
LRRC28-207ENST00000558500 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.15□□□□□ -1.1
LRRC28-207ENST00000558500 ATP2A1O14983 1001 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms