RNA–Protein interactions for RNA: ENST00000558478.1

AL136295.2-201, humanhuman

TSL 1 (best) BASIC

Gene AL136295.2, Length 747 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL136295.2-201ENST00000558478 STK38Q15208 465 aa11.7□□□□□ -0.54
AL136295.2-201ENST00000558478 SF3A1Q15459 793 aaKnown RBP11.7□□□□□ -0.54
AL136295.2-201ENST00000558478 ZYXQ15942 572 aaKnown RBP11.7□□□□□ -0.54
AL136295.2-201ENST00000558478 CDC37Q16543 378 aaPredicted RBP11.7□□□□□ -0.54
AL136295.2-201ENST00000558478 KLHL40Q2TBA0 621 aa11.7□□□□□ -0.54
AL136295.2-201ENST00000558478 FAM83BQ5T0W9 1011 aa11.7□□□□□ -0.54
AL136295.2-201ENST00000558478 LDHDQ86WU2 507 aa11.7□□□□□ -0.54
AL136295.2-201ENST00000558478 ANKRD13AQ8IZ07 590 aa11.7□□□□□ -0.54
AL136295.2-201ENST00000558478 ZKSCAN4Q969J2 545 aaPredicted RBP11.7□□□□□ -0.54
AL136295.2-201ENST00000558478 SYAP1Q96A49 352 aaPredicted RBP11.7□□□□□ -0.54
AL136295.2-201ENST00000558478 MTMR8Q96EF0 704 aa11.7□□□□□ -0.54
AL136295.2-201ENST00000558478 AMNQ9BXJ7 453 aa11.7□□□□□ -0.54
AL136295.2-201ENST00000558478 GJB4Q9NTQ9 266 aa11.7□□□□□ -0.54
AL136295.2-201ENST00000558478 RTEL1Q9NZ71 1219 aa11.7□□□□□ -0.54
AL136295.2-201ENST00000558478 TMOD4Q9NZQ9 345 aa11.7□□□□□ -0.54
AL136295.2-201ENST00000558478 KIF28PB7ZC32 967 aa11.69□□□□□ -0.54
AL136295.2-201ENST00000558478 TRAK2O60296 914 aa11.69□□□□□ -0.54
AL136295.2-201ENST00000558478 USP2O75604 605 aaPredicted RBP11.69□□□□□ -0.54
AL136295.2-201ENST00000558478 SLC16A2P36021 539 aa11.69□□□□□ -0.54
AL136295.2-201ENST00000558478 NASPP49321 788 aaPredicted RBP11.69□□□□□ -0.54
AL136295.2-201ENST00000558478 MRPL12P52815 198 aaKnown RBP11.69□□□□□ -0.54
AL136295.2-201ENST00000558478 FKBP1BP68106 108 aa11.69□□□□□ -0.54
AL136295.2-201ENST00000558478 MAP3K11Q16584 847 aa11.69□□□□□ -0.54
AL136295.2-201ENST00000558478 TTBK2Q6IQ55 1244 aa11.69□□□□□ -0.54
AL136295.2-201ENST00000558478 KRT25Q7Z3Z0 450 aa11.69□□□□□ -0.54
AL136295.2-201ENST00000558478 REXO1Q8N1G1 1221 aaKnown RBP11.69□□□□□ -0.54
AL136295.2-201ENST00000558478 LEO1Q8WVC0 666 aaPredicted RBP11.69□□□□□ -0.54
AL136295.2-201ENST00000558478 CUL5Q93034 780 aa11.69□□□□□ -0.54
AL136295.2-201ENST00000558478 C12orf42Q96LP6 360 aa11.69□□□□□ -0.54
AL136295.2-201ENST00000558478 NUP88Q99567 741 aaPredicted RBP11.69□□□□□ -0.54
AL136295.2-201ENST00000558478 TANGO6Q9C0B7 1094 aa11.69□□□□□ -0.54
AL136295.2-201ENST00000558478 CPVLQ9H3G5 476 aa11.69□□□□□ -0.54
AL136295.2-201ENST00000558478 LMBRD1Q9NUN5 540 aa11.69□□□□□ -0.54
AL136295.2-201ENST00000558478 CTDP1Q9Y5B0 961 aaPredicted RBP11.69□□□□□ -0.54
AL136295.2-201ENST00000558478 ZHX2Q9Y6X8 837 aa11.69□□□□□ -0.54
AL136295.2-201ENST00000558478 SMCO2A6NFE2 343 aa11.68□□□□□ -0.54
AL136295.2-201ENST00000558478 POTECB2RU33 542 aa11.68□□□□□ -0.54
AL136295.2-201ENST00000558478 PPATQ06203 517 aa11.68□□□□□ -0.54
AL136295.2-201ENST00000558478 SPP2Q13103 211 aa11.68□□□□□ -0.54
AL136295.2-201ENST00000558478 NR5A1Q13285 461 aa11.68□□□□□ -0.54
AL136295.2-201ENST00000558478 PRKG1Q13976 671 aa11.68□□□□□ -0.54
AL136295.2-201ENST00000558478 VGLL4Q14135 290 aa11.68□□□□□ -0.54
AL136295.2-201ENST00000558478 SLC35G1Q2M3R5 365 aa11.68□□□□□ -0.54
AL136295.2-201ENST00000558478 QRICH1Q2TAL8 776 aa11.68□□□□□ -0.54
AL136295.2-201ENST00000558478 ANO1Q5XXA6 986 aa11.68□□□□□ -0.54
AL136295.2-201ENST00000558478 FAM173BQ6P4H8 233 aa11.68□□□□□ -0.54
AL136295.2-201ENST00000558478 FBXO11Q86XK2 927 aa11.68□□□□□ -0.54
AL136295.2-201ENST00000558478 PRPF38AQ8NAV1 312 aaKnown RBP11.68□□□□□ -0.54
AL136295.2-201ENST00000558478 PHF12Q96QT6 1004 aa11.68□□□□□ -0.54
AL136295.2-201ENST00000558478 USP28Q96RU2 1077 aa11.68□□□□□ -0.54
AL136295.2-201ENST00000558478 SLF1Q9BQI6 1058 aa11.68□□□□□ -0.54
AL136295.2-201ENST00000558478 GLIS2Q9BZE0 524 aaPredicted RBP11.68□□□□□ -0.54
AL136295.2-201ENST00000558478 GDPD2Q9HCC8 539 aa11.68□□□□□ -0.54
AL136295.2-201ENST00000558478 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.68□□□□□ -0.54
AL136295.2-201ENST00000558478 PRR12Q9ULL5 1215 aa11.68□□□□□ -0.54
AL136295.2-201ENST00000558478 PCDHA1Q9Y5I3 950 aa11.68□□□□□ -0.54
AL136295.2-201ENST00000558478 POLR2AP24928 1970 aaKnown RBP11.67□□□□□ -0.54
AL136295.2-201ENST00000558478 TRIM75PA6NK02 468 aa11.67□□□□□ -0.54
AL136295.2-201ENST00000558478 VCAM1P19320 739 aa11.67□□□□□ -0.54
AL136295.2-201ENST00000558478 YY1P25490 414 aa11.67□□□□□ -0.54
AL136295.2-201ENST00000558478 ME1P48163 572 aa11.67□□□□□ -0.54
AL136295.2-201ENST00000558478 CEBPZQ03701 1054 aaKnown RBP11.67□□□□□ -0.54
AL136295.2-201ENST00000558478 ERO1BQ86YB8 467 aa11.67□□□□□ -0.54
AL136295.2-201ENST00000558478 KIFC2Q96AC6 838 aa11.67□□□□□ -0.54
AL136295.2-201ENST00000558478 RANBP17Q9H2T7 1088 aaKnown RBP11.67□□□□□ -0.54
AL136295.2-201ENST00000558478 RRAGCQ9HB90 399 aa11.67□□□□□ -0.54
AL136295.2-201ENST00000558478 RIC8AQ9NPQ8 531 aa11.67□□□□□ -0.54
AL136295.2-201ENST00000558478 TFIP11Q9UBB9 837 aaKnown RBP11.67□□□□□ -0.54
AL136295.2-201ENST00000558478 RCOR1Q9UKL0 485 aa11.67□□□□□ -0.54
AL136295.2-201ENST00000558478 SNCAIPQ9Y6H5 919 aa11.67□□□□□ -0.54
AL136295.2-201ENST00000558478 PAPPA2Q9BXP8 1791 aa11.67□□□□□ -0.54
AL136295.2-201ENST00000558478 SPTLC2O15270 562 aa11.66□□□□□ -0.54
AL136295.2-201ENST00000558478 PPP6R2O75170 966 aa11.66□□□□□ -0.54
AL136295.2-201ENST00000558478 FLOT1O75955 427 aa11.66□□□□□ -0.54
AL136295.2-201ENST00000558478 AP3B2Q13367 1082 aa11.66□□□□□ -0.54
AL136295.2-201ENST00000558478 ORC2Q13416 577 aaPredicted RBP11.66□□□□□ -0.54
AL136295.2-201ENST00000558478 NONOQ15233 471 aaKnown RBP eCLIP11.66□□□□□ -0.54
AL136295.2-201ENST00000558478 NPY5RQ15761 445 aa11.66□□□□□ -0.54
AL136295.2-201ENST00000558478 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.66□□□□□ -0.54
AL136295.2-201ENST00000558478 PIK3AP1Q6ZUJ8 805 aa11.66□□□□□ -0.54
AL136295.2-201ENST00000558478 CCDC84Q86UT8 332 aaPredicted RBP11.66□□□□□ -0.54
AL136295.2-201ENST00000558478 LINC00301Q8NCQ3 95 aa11.66□□□□□ -0.54
AL136295.2-201ENST00000558478 OXER1Q8TDS5 423 aa11.66□□□□□ -0.54
AL136295.2-201ENST00000558478 TNFRSF25Q93038 417 aa11.66□□□□□ -0.54
AL136295.2-201ENST00000558478 NAP1L4Q99733 375 aaKnown RBP11.66□□□□□ -0.54
AL136295.2-201ENST00000558478 RPAP3Q9H6T3 665 aaPredicted RBP11.66□□□□□ -0.54
AL136295.2-201ENST00000558478 PSTPIP2Q9H939 334 aa11.66□□□□□ -0.54
AL136295.2-201ENST00000558478 AFG3L2Q9Y4W6 797 aa11.66□□□□□ -0.54
AL136295.2-201ENST00000558478 MORC2Q9Y6X9 1032 aaPredicted RBP11.66□□□□□ -0.54
AL136295.2-201ENST00000558478 OTOFQ9HC10 1997 aa11.66□□□□□ -0.54
AL136295.2-201ENST00000558478 ABCB11O95342 1321 aa11.65□□□□□ -0.54
AL136295.2-201ENST00000558478 MYPNQ86TC9 1320 aa11.65□□□□□ -0.54
AL136295.2-201ENST00000558478 SPDYE5A6NIY4 337 aa11.65□□□□□ -0.54
AL136295.2-201ENST00000558478 CXCL11O14625 94 aa11.65□□□□□ -0.54
AL136295.2-201ENST00000558478 ZBED4O75132 1171 aa11.65□□□□□ -0.54
AL136295.2-201ENST00000558478 HMGCS2P54868 508 aa11.65□□□□□ -0.54
AL136295.2-201ENST00000558478 PABPC4Q13310 644 aaKnown RBP eCLIP11.65□□□□□ -0.54
AL136295.2-201ENST00000558478 PPIL2Q13356 520 aa11.65□□□□□ -0.54
AL136295.2-201ENST00000558478 SLC39A14Q15043 492 aa11.65□□□□□ -0.54
AL136295.2-201ENST00000558478 SH3D19Q5HYK7 790 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms