RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 LRRC23Q53EV4 343 aaPredicted RBP15.31■□□□□ 0.04
SPG11-210ENST00000558319 SRGAP1Q7Z6B7 1085 aa15.31■□□□□ 0.04
SPG11-210ENST00000558319 IRAK4Q9NWZ3 460 aa15.31■□□□□ 0.04
SPG11-210ENST00000558319 SERTAD1Q9UHV2 236 aa15.31■□□□□ 0.04
SPG11-210ENST00000558319 PTPN22Q9Y2R2 807 aa15.31■□□□□ 0.04
SPG11-210ENST00000558319 ZBBXA8MT70 800 aa15.31■□□□□ 0.04
SPG11-210ENST00000558319 FLOT1O75955 427 aa15.31■□□□□ 0.04
SPG11-210ENST00000558319 DNM2P50570 870 aa15.31■□□□□ 0.04
SPG11-210ENST00000558319 ZNF827Q17R98 1081 aa15.31■□□□□ 0.04
SPG11-210ENST00000558319 TMTC4Q5T4D3 741 aa15.31■□□□□ 0.04
SPG11-210ENST00000558319 PIP4K2CQ8TBX8 421 aa15.31■□□□□ 0.04
SPG11-210ENST00000558319 HOMER3Q9NSC5 361 aa15.31■□□□□ 0.04
SPG11-210ENST00000558319 KCNA4P22459 653 aa15.3■□□□□ 0.04
SPG11-210ENST00000558319 MMEL1Q495T6 779 aa15.3■□□□□ 0.04
SPG11-210ENST00000558319 JADE1Q6IE81 842 aa15.3■□□□□ 0.04
SPG11-210ENST00000558319 SMCO2A6NFE2 343 aa15.3■□□□□ 0.04
SPG11-210ENST00000558319 EYA2O00167 538 aa15.3■□□□□ 0.04
SPG11-210ENST00000558319 ZKSCAN8Q15776 578 aaPredicted RBP15.3■□□□□ 0.04
SPG11-210ENST00000558319 CCDC125Q86Z20 511 aa15.3■□□□□ 0.04
SPG11-210ENST00000558319 USP19O94966 1318 aa15.3■□□□□ 0.04
SPG11-210ENST00000558319 HAUS3Q68CZ6 603 aa15.3■□□□□ 0.04
SPG11-210ENST00000558319 BNIP3LO60238 219 aa15.3■□□□□ 0.04
SPG11-210ENST00000558319 POLA2Q14181 598 aa15.3■□□□□ 0.04
SPG11-210ENST00000558319 SCYL3Q8IZE3 742 aa15.3■□□□□ 0.04
SPG11-210ENST00000558319 PARD3BQ8TEW8 1205 aa15.3■□□□□ 0.04
SPG11-210ENST00000558319 CCDC127Q96BQ5 260 aa15.3■□□□□ 0.04
SPG11-210ENST00000558319 ZBTB40Q9NUA8 1239 aa15.3■□□□□ 0.04
SPG11-210ENST00000558319 CYP4A11Q02928 519 aa15.3■□□□□ 0.04
SPG11-210ENST00000558319 ANKRD65E5RJM6 399 aa15.29■□□□□ 0.04
SPG11-210ENST00000558319 ENC1O14682 589 aa15.29■□□□□ 0.04
SPG11-210ENST00000558319 DEPTORQ8TB45 409 aa15.29■□□□□ 0.04
SPG11-210ENST00000558319 INPP5FQ9Y2H2 1132 aa15.29■□□□□ 0.04
SPG11-210ENST00000558319 GUCY2DQ02846 1103 aa15.29■□□□□ 0.04
SPG11-210ENST00000558319 TTBK2Q6IQ55 1244 aa15.29■□□□□ 0.04
SPG11-210ENST00000558319 GPBP1Q86WP2 473 aa15.29■□□□□ 0.04
SPG11-210ENST00000558319 PRPF31Q8WWY3 499 aaKnown RBP15.29■□□□□ 0.04
SPG11-210ENST00000558319 P3H4Q92791 437 aa15.29■□□□□ 0.04
SPG11-210ENST00000558319 NRBP1Q9UHY1 535 aa15.29■□□□□ 0.04
SPG11-210ENST00000558319 POC1B-GALNT4F8VUJ3 575 aa15.29■□□□□ 0.04
SPG11-210ENST00000558319 GAS7O60861 476 aa15.29■□□□□ 0.04
SPG11-210ENST00000558319 PPP1R2P41236 205 aa15.29■□□□□ 0.04
SPG11-210ENST00000558319 TAF11Q15544 211 aa15.29■□□□□ 0.04
SPG11-210ENST00000558319 LRRC8CQ8TDW0 803 aa15.29■□□□□ 0.04
SPG11-210ENST00000558319 METTL22Q9BUU2 404 aaPredicted RBP15.29■□□□□ 0.04
SPG11-210ENST00000558319 MFSD14BQ5SR56 506 aa15.29■□□□□ 0.04
SPG11-210ENST00000558319 PLBD2Q8NHP8 589 aa15.29■□□□□ 0.04
SPG11-210ENST00000558319 SOS1Q07889 1333 aaPredicted RBP15.29■□□□□ 0.04
SPG11-210ENST00000558319 MAP3K19Q56UN5 1328 aa15.29■□□□□ 0.04
SPG11-210ENST00000558319 ZNF500O60304 480 aaPredicted RBP15.29■□□□□ 0.04
SPG11-210ENST00000558319 LRGUKQ96M69 825 aa15.29■□□□□ 0.04
SPG11-210ENST00000558319 FAM193BQ96PV7 902 aaPredicted RBP15.29■□□□□ 0.04
SPG11-210ENST00000558319 EXOC7Q9UPT5 735 aa15.29■□□□□ 0.04
SPG11-210ENST00000558319 KRT3P12035 628 aa15.28■□□□□ 0.04
SPG11-210ENST00000558319 CDAN1Q8IWY9 1227 aa15.28■□□□□ 0.04
SPG11-210ENST00000558319 LARSQ9P2J5 1176 aaKnown RBP15.28■□□□□ 0.04
SPG11-210ENST00000558319 SLC4A7Q9Y6M7 1214 aa15.28■□□□□ 0.04
SPG11-210ENST00000558319 SPDYE2BA6NHP3 402 aa15.28■□□□□ 0.04
SPG11-210ENST00000558319 K7ENM7 598 aa15.28■□□□□ 0.04
SPG11-210ENST00000558319 SPDYE6P0CI01 402 aa15.28■□□□□ 0.04
SPG11-210ENST00000558319 OSTNP61366 133 aa15.28■□□□□ 0.04
SPG11-210ENST00000558319 XKR9Q5GH70 373 aa15.28■□□□□ 0.04
SPG11-210ENST00000558319 MCUQ8NE86 351 aa15.28■□□□□ 0.04
SPG11-210ENST00000558319 NAP1L4Q99733 375 aaKnown RBP15.28■□□□□ 0.04
SPG11-210ENST00000558319 ANGEL1Q9UNK9 670 aaKnown RBP15.28■□□□□ 0.04
SPG11-210ENST00000558319 HYOU1Q9Y4L1 999 aa15.28■□□□□ 0.04
SPG11-210ENST00000558319 SH3TC1Q8TE82 1336 aa15.28■□□□□ 0.04
SPG11-210ENST00000558319 SPATS2Q86XZ4 545 aaKnown RBP15.28■□□□□ 0.04
SPG11-210ENST00000558319 KCNJ18B7U540 433 aa15.28■□□□□ 0.04
SPG11-210ENST00000558319 KCNJ12Q14500 433 aa15.28■□□□□ 0.04
SPG11-210ENST00000558319 CCDC197Q8NCU1 140 aa15.28■□□□□ 0.04
SPG11-210ENST00000558319 CLIC6Q96NY7 704 aa15.28■□□□□ 0.04
SPG11-210ENST00000558319 IFT122Q9HBG6 1241 aa15.28■□□□□ 0.04
SPG11-210ENST00000558319 GSTA1P08263 222 aa15.28■□□□□ 0.04
SPG11-210ENST00000558319 GSTA2P09210 222 aa15.28■□□□□ 0.04
SPG11-210ENST00000558319 NONOQ15233 471 aaKnown RBP eCLIP15.28■□□□□ 0.04
SPG11-210ENST00000558319 TRIM58Q8NG06 486 aa15.28■□□□□ 0.04
SPG11-210ENST00000558319 GPR101Q96P66 508 aaPredicted RBP15.28■□□□□ 0.04
SPG11-210ENST00000558319 CCDC87Q9NVE4 849 aa15.28■□□□□ 0.04
SPG11-210ENST00000558319 CSADQ9Y600 493 aa15.28■□□□□ 0.04
SPG11-210ENST00000558319 H7C1D1 291 aa15.27■□□□□ 0.04
SPG11-210ENST00000558319 PDE6BP35913 854 aa15.27■□□□□ 0.04
SPG11-210ENST00000558319 NLRX1Q86UT6 975 aa15.27■□□□□ 0.04
SPG11-210ENST00000558319 A0A087WWV3 80 aa15.27■□□□□ 0.04
SPG11-210ENST00000558319 ASXL1Q8IXJ9 1541 aa15.27■□□□□ 0.04
SPG11-210ENST00000558319 BCRP11274 1271 aa15.27■□□□□ 0.04
SPG11-210ENST00000558319 EFCAB13Q8IY85 973 aa15.27■□□□□ 0.04
SPG11-210ENST00000558319 KDM5BQ9UGL1 1544 aa15.27■□□□□ 0.03
SPG11-210ENST00000558319 LIG4P49917 911 aa15.27■□□□□ 0.03
SPG11-210ENST00000558319 KCTD1Q719H9 257 aa15.27■□□□□ 0.03
SPG11-210ENST00000558319 KDM2BQ8NHM5 1336 aa15.27■□□□□ 0.03
SPG11-210ENST00000558319 LRRIQ4A6NIV6 560 aa15.27■□□□□ 0.03
SPG11-210ENST00000558319 EIF4E1BA6NMX2 242 aaKnown RBP15.27■□□□□ 0.03
SPG11-210ENST00000558319 PHBP35232 272 aa15.27■□□□□ 0.03
SPG11-210ENST00000558319 MYLK4Q86YV6 388 aaPredicted RBP15.27■□□□□ 0.03
SPG11-210ENST00000558319 ANKRD35Q8N283 1001 aa15.27■□□□□ 0.03
SPG11-210ENST00000558319 NLRP7Q8WX94 980 aa15.27■□□□□ 0.03
SPG11-210ENST00000558319 PPP1R13BQ96KQ4 1090 aa15.27■□□□□ 0.03
SPG11-210ENST00000558319 SLC39A2Q9NP94 309 aa15.27■□□□□ 0.03
SPG11-210ENST00000558319 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.27■□□□□ 0.03
SPG11-210ENST00000558319 USP17L12C9JPN9 530 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms