RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 ACVR2BQ13705 512 aa18.38■□□□□ 0.53
TPM1-211ENST00000558314 MCMDC2Q4G0Z9 681 aa18.38■□□□□ 0.53
TPM1-211ENST00000558314 SLC17A8Q8NDX2 589 aa18.38■□□□□ 0.53
TPM1-211ENST00000558314 GMCL1Q96IK5 515 aa18.38■□□□□ 0.53
TPM1-211ENST00000558314 FAM161BQ96MY7 647 aa18.38■□□□□ 0.53
TPM1-211ENST00000558314 PDLIM7Q9NR12 457 aa18.38■□□□□ 0.53
TPM1-211ENST00000558314 IL17RBQ9NRM6 502 aa18.38■□□□□ 0.53
TPM1-211ENST00000558314 SYNPO2Q9UMS6 1093 aa18.38■□□□□ 0.53
TPM1-211ENST00000558314 SYNGAP1Q96PV0 1343 aa18.38■□□□□ 0.53
TPM1-211ENST00000558314 SYNRGQ9UMZ2 1314 aa18.38■□□□□ 0.53
TPM1-211ENST00000558314 DNAJC25-GNG10A0A024R161 153 aa18.37■□□□□ 0.53
TPM1-211ENST00000558314 TRIM43BA6NCK2 446 aa18.37■□□□□ 0.53
TPM1-211ENST00000558314 C6orf222P0C671 652 aaPredicted RBP18.37■□□□□ 0.53
TPM1-211ENST00000558314 OAZ1P54368 228 aa18.37■□□□□ 0.53
TPM1-211ENST00000558314 IRX5P78411 483 aaPredicted RBP18.37■□□□□ 0.53
TPM1-211ENST00000558314 ARMCX2Q7L311 632 aa18.37■□□□□ 0.53
TPM1-211ENST00000558314 MSL3Q8N5Y2 521 aaKnown RBP18.37■□□□□ 0.53
TPM1-211ENST00000558314 TRIM43Q96BQ3 446 aaPredicted RBP18.37■□□□□ 0.53
TPM1-211ENST00000558314 TRERF1Q96PN7 1200 aa18.37■□□□□ 0.53
TPM1-211ENST00000558314 RWDD1Q9H446 243 aaPredicted RBP18.37■□□□□ 0.53
TPM1-211ENST00000558314 STARD7Q9NQZ5 370 aa18.37■□□□□ 0.53
TPM1-211ENST00000558314 MYADML2A6NDP7 307 aa18.36■□□□□ 0.53
TPM1-211ENST00000558314 ADAMTS4O75173 837 aa18.36■□□□□ 0.53
TPM1-211ENST00000558314 ACLYP53396 1101 aa18.36■□□□□ 0.53
TPM1-211ENST00000558314 SNX17Q15036 470 aa18.36■□□□□ 0.53
TPM1-211ENST00000558314 SHHQ15465 462 aa18.36■□□□□ 0.53
TPM1-211ENST00000558314 KCNA10Q16322 511 aa18.36■□□□□ 0.53
TPM1-211ENST00000558314 CCDC144BQ3MJ40 725 aa18.36■□□□□ 0.53
TPM1-211ENST00000558314 FRMPD2Q68DX3 1309 aaPredicted RBP18.36■□□□□ 0.53
TPM1-211ENST00000558314 RCSD1Q6JBY9 416 aa18.36■□□□□ 0.53
TPM1-211ENST00000558314 ZNF589Q86UQ0 364 aaPredicted RBP18.36■□□□□ 0.53
TPM1-211ENST00000558314 CCDC144CPQ8IYA2 1237 aa18.36■□□□□ 0.53
TPM1-211ENST00000558314 SPC25Q9HBM1 224 aa18.36■□□□□ 0.53
TPM1-211ENST00000558314 GPCPD1Q9NPB8 672 aa18.36■□□□□ 0.53
TPM1-211ENST00000558314 PRR12Q9ULL5 1215 aa18.36■□□□□ 0.53
TPM1-211ENST00000558314 LAMA3Q16787 3333 aa18.36■□□□□ 0.53
TPM1-211ENST00000558314 FGAP02671 866 aa18.35■□□□□ 0.53
TPM1-211ENST00000558314 CLTBP09497 229 aa18.35■□□□□ 0.53
TPM1-211ENST00000558314 FDX1P10109 184 aa18.35■□□□□ 0.53
TPM1-211ENST00000558314 RAG1P15918 1043 aa18.35■□□□□ 0.53
TPM1-211ENST00000558314 SLC16A2P36021 539 aa18.35■□□□□ 0.53
TPM1-211ENST00000558314 C9orf50Q5SZB4 431 aa18.35■□□□□ 0.53
TPM1-211ENST00000558314 MAMDC4Q6UXC1 1216 aa18.35■□□□□ 0.53
TPM1-211ENST00000558314 NSMFQ6X4W1 530 aa18.35■□□□□ 0.53
TPM1-211ENST00000558314 A1CFQ9NQ94 594 aaKnown RBP18.35■□□□□ 0.53
TPM1-211ENST00000558314 TMEM39AQ9NV64 488 aa18.35■□□□□ 0.53
TPM1-211ENST00000558314 ANAPC4Q9UJX5 808 aa18.35■□□□□ 0.53
TPM1-211ENST00000558314 CCPG1Q9ULG6 757 aa18.35■□□□□ 0.53
TPM1-211ENST00000558314 DDX49Q9Y6V7 483 aaKnown RBP18.35■□□□□ 0.53
TPM1-211ENST00000558314 ZNF536O15090 1300 aa18.34■□□□□ 0.53
TPM1-211ENST00000558314 HSPD1P10809 573 aaKnown RBP18.34■□□□□ 0.53
TPM1-211ENST00000558314 TTBK2Q6IQ55 1244 aa18.34■□□□□ 0.53
TPM1-211ENST00000558314 EEPD1Q7L9B9 569 aa18.34■□□□□ 0.53
TPM1-211ENST00000558314 ZNF467Q7Z7K2 595 aaPredicted RBP18.34■□□□□ 0.53
TPM1-211ENST00000558314 NUP133Q8WUM0 1156 aa18.34■□□□□ 0.53
TPM1-211ENST00000558314 FGD4Q96M96 766 aa18.34■□□□□ 0.53
TPM1-211ENST00000558314 ABHD16BQ9H3Z7 469 aa18.34■□□□□ 0.53
TPM1-211ENST00000558314 CCDC171Q6TFL3 1326 aa18.33■□□□□ 0.53
TPM1-211ENST00000558314 DCDC2CA8MYV0 355 aa18.33■□□□□ 0.52
TPM1-211ENST00000558314 ADCY6O43306 1168 aa18.33■□□□□ 0.52
TPM1-211ENST00000558314 ORC4O43929 436 aa18.33■□□□□ 0.52
TPM1-211ENST00000558314 DUSP11O75319 330 aaKnown RBP18.33■□□□□ 0.52
TPM1-211ENST00000558314 ALX1Q15699 326 aa18.33■□□□□ 0.52
TPM1-211ENST00000558314 TKFCQ3LXA3 575 aa18.33■□□□□ 0.52
TPM1-211ENST00000558314 MUM1L1Q5H9M0 696 aa18.33■□□□□ 0.52
TPM1-211ENST00000558314 GPR153Q6NV75 609 aa18.33■□□□□ 0.52
TPM1-211ENST00000558314 EXOC6Q8TAG9 804 aa18.33■□□□□ 0.52
TPM1-211ENST00000558314 DCAF4Q8WV16 495 aa18.33■□□□□ 0.52
TPM1-211ENST00000558314 GLT1D1Q96MS3 346 aa18.33■□□□□ 0.52
TPM1-211ENST00000558314 MTMR10Q9NXD2 777 aa18.33■□□□□ 0.52
TPM1-211ENST00000558314 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.32■□□□□ 0.52
TPM1-211ENST00000558314 SOWAHBA6NEL2 793 aa18.32■□□□□ 0.52
TPM1-211ENST00000558314 MOXD2PA6NHM9 499 aa18.32■□□□□ 0.52
TPM1-211ENST00000558314 IGHDP01880 384 aa18.32■□□□□ 0.52
TPM1-211ENST00000558314 ITGB8P26012 769 aa18.32■□□□□ 0.52
TPM1-211ENST00000558314 BEX3Q00994 111 aa18.32■□□□□ 0.52
TPM1-211ENST00000558314 GNASQ5JWF2 1037 aa18.32■□□□□ 0.52
TPM1-211ENST00000558314 C1orf53Q5VUE5 145 aa18.32■□□□□ 0.52
TPM1-211ENST00000558314 MFSD6Q6ZSS7 791 aa18.32■□□□□ 0.52
TPM1-211ENST00000558314 CHD1LQ86WJ1 897 aa18.32■□□□□ 0.52
TPM1-211ENST00000558314 TMEM47Q9BQJ4 181 aa18.32■□□□□ 0.52
TPM1-211ENST00000558314 TSEN34Q9BSV6 310 aaKnown RBP18.32■□□□□ 0.52
TPM1-211ENST00000558314 DNAH12Q6ZR08 3092 aa18.31■□□□□ 0.52
TPM1-211ENST00000558314 ASB14A6NK59 587 aa18.31■□□□□ 0.52
TPM1-211ENST00000558314 ASGR1P07306 291 aa18.31■□□□□ 0.52
TPM1-211ENST00000558314 TOP1P11387 765 aaKnown RBP18.31■□□□□ 0.52
TPM1-211ENST00000558314 SDSP20132 328 aa18.31■□□□□ 0.52
TPM1-211ENST00000558314 TNFAIP2Q03169 654 aa18.31■□□□□ 0.52
TPM1-211ENST00000558314 SYDE2Q5VT97 1194 aa18.31■□□□□ 0.52
TPM1-211ENST00000558314 FAM133AQ8N9E0 248 aa18.31■□□□□ 0.52
TPM1-211ENST00000558314 PCSK9Q8NBP7 692 aaKnown RBP18.31■□□□□ 0.52
TPM1-211ENST00000558314 KLHDC9Q8NEP7 349 aa18.31■□□□□ 0.52
TPM1-211ENST00000558314 PURBQ96QR8 312 aaKnown RBP18.31■□□□□ 0.52
TPM1-211ENST00000558314 ZKSCAN3Q9BRR0 538 aa18.31■□□□□ 0.52
TPM1-211ENST00000558314 DIAPH3Q9NSV4 1193 aa18.31■□□□□ 0.52
TPM1-211ENST00000558314 LTBP2Q14767 1821 aa18.3■□□□□ 0.52
TPM1-211ENST00000558314 MCM3APO60318 1980 aa18.3■□□□□ 0.52
TPM1-211ENST00000558314 PTGS1P23219 599 aa18.3■□□□□ 0.52
TPM1-211ENST00000558314 ZNF697Q5TEC3 545 aa18.3■□□□□ 0.52
TPM1-211ENST00000558314 CWC27Q6UX04 472 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms