RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 MAP1SQ66K74 1059 aaPredicted RBP12.05□□□□□ -0.48
GABRB3-213ENST00000557765 MOXD1Q6UVY6 613 aa12.05□□□□□ -0.48
GABRB3-213ENST00000557765 DIS3L2Q8IYB7 885 aaKnown RBP12.05□□□□□ -0.48
GABRB3-213ENST00000557765 REXO1Q8N1G1 1221 aaKnown RBP12.05□□□□□ -0.48
GABRB3-213ENST00000557765 SLC38A10Q9HBR0 1119 aa12.05□□□□□ -0.48
GABRB3-213ENST00000557765 EMILIN3Q9NT22 766 aa12.05□□□□□ -0.48
GABRB3-213ENST00000557765 FOXD4L1Q9NU39 408 aa12.05□□□□□ -0.48
GABRB3-213ENST00000557765 AGTPBP1Q9UPW5 1226 aa12.05□□□□□ -0.48
GABRB3-213ENST00000557765 ZDHHC9Q9Y397 364 aa12.05□□□□□ -0.48
GABRB3-213ENST00000557765 PCDHA1Q9Y5I3 950 aa12.05□□□□□ -0.48
GABRB3-213ENST00000557765 PASKQ96RG2 1323 aa12.05□□□□□ -0.48
GABRB3-213ENST00000557765 LOC285556D6RIA3 1793 aa12.05□□□□□ -0.48
GABRB3-213ENST00000557765 MYH6P13533 1939 aa12.04□□□□□ -0.48
GABRB3-213ENST00000557765 CCDC194A0A1B0GVG4 234 aa12.04□□□□□ -0.48
GABRB3-213ENST00000557765 STXBP3O00186 592 aa12.04□□□□□ -0.48
GABRB3-213ENST00000557765 FLOT1O75955 427 aa12.04□□□□□ -0.48
GABRB3-213ENST00000557765 BAG4O95429 457 aaKnown RBP12.04□□□□□ -0.48
GABRB3-213ENST00000557765 DSG3P32926 999 aa12.04□□□□□ -0.48
GABRB3-213ENST00000557765 GCLCP48506 637 aaPredicted RBP12.04□□□□□ -0.48
GABRB3-213ENST00000557765 ADCY7P51828 1080 aa12.04□□□□□ -0.48
GABRB3-213ENST00000557765 MYSM1Q5VVJ2 828 aa12.04□□□□□ -0.48
GABRB3-213ENST00000557765 WWC2Q6AWC2 1192 aa12.04□□□□□ -0.48
GABRB3-213ENST00000557765 OTUD7BQ6GQQ9 843 aa12.04□□□□□ -0.48
GABRB3-213ENST00000557765 XRRA1Q6P2D8 792 aa12.04□□□□□ -0.48
GABRB3-213ENST00000557765 KCTD1Q719H9 257 aa12.04□□□□□ -0.48
GABRB3-213ENST00000557765 HEATR3Q7Z4Q2 680 aa12.04□□□□□ -0.48
GABRB3-213ENST00000557765 PIGSQ96S52 555 aa12.04□□□□□ -0.48
GABRB3-213ENST00000557765 PYM1Q9BRP8 204 aaKnown RBP12.04□□□□□ -0.48
GABRB3-213ENST00000557765 GPCPD1Q9NPB8 672 aa12.04□□□□□ -0.48
GABRB3-213ENST00000557765 NMRK2Q9NPI5 230 aa12.04□□□□□ -0.48
GABRB3-213ENST00000557765 RTEL1Q9NZ71 1219 aa12.04□□□□□ -0.48
GABRB3-213ENST00000557765 PHIPQ8WWQ0 1821 aa12.04□□□□□ -0.48
GABRB3-213ENST00000557765 TRPM7Q96QT4 1865 aa12.04□□□□□ -0.48
GABRB3-213ENST00000557765 TESPA1A2RU30 521 aaPredicted RBP12.03□□□□□ -0.48
GABRB3-213ENST00000557765 SMCO2A6NFE2 343 aa12.03□□□□□ -0.48
GABRB3-213ENST00000557765 MANSC4A6NHS7 340 aaPredicted RBP12.03□□□□□ -0.48
GABRB3-213ENST00000557765 TRIM75PA6NK02 468 aa12.03□□□□□ -0.48
GABRB3-213ENST00000557765 B4DLN1 442 aa12.03□□□□□ -0.48
GABRB3-213ENST00000557765 RAD21O60216 631 aa12.03□□□□□ -0.48
GABRB3-213ENST00000557765 PPP6R2O75170 966 aa12.03□□□□□ -0.48
GABRB3-213ENST00000557765 CELF2O95319 508 aaKnown RBP12.03□□□□□ -0.48
GABRB3-213ENST00000557765 SLC25A27O95847 323 aa12.03□□□□□ -0.48
GABRB3-213ENST00000557765 GOLGA8HP0CJ92 632 aa12.03□□□□□ -0.48
GABRB3-213ENST00000557765 NASPP49321 788 aaPredicted RBP12.03□□□□□ -0.48
GABRB3-213ENST00000557765 USP11P51784 963 aa12.03□□□□□ -0.48
GABRB3-213ENST00000557765 QRICH1Q2TAL8 776 aa12.03□□□□□ -0.48
GABRB3-213ENST00000557765 ARL6IP4Q66PJ3 421 aaKnown RBP12.03□□□□□ -0.48
GABRB3-213ENST00000557765 MCTP1Q6DN14 999 aa12.03□□□□□ -0.48
GABRB3-213ENST00000557765 ANKRD23Q86SG2 305 aa12.03□□□□□ -0.48
GABRB3-213ENST00000557765 CCDC82Q8N4S0 544 aa12.03□□□□□ -0.48
GABRB3-213ENST00000557765 CHST13Q8NET6 341 aa12.03□□□□□ -0.48
GABRB3-213ENST00000557765 OPTNQ96CV9 577 aa12.03□□□□□ -0.48
GABRB3-213ENST00000557765 TEX13BQ9BXU2 312 aa12.03□□□□□ -0.48
GABRB3-213ENST00000557765 TANGO6Q9C0B7 1094 aa12.03□□□□□ -0.48
GABRB3-213ENST00000557765 RPAP3Q9H6T3 665 aaPredicted RBP12.03□□□□□ -0.48
GABRB3-213ENST00000557765 PSTPIP2Q9H939 334 aa12.03□□□□□ -0.48
GABRB3-213ENST00000557765 STK24Q9Y6E0 443 aa12.03□□□□□ -0.48
GABRB3-213ENST00000557765 FRMPD2Q68DX3 1309 aaPredicted RBP12.03□□□□□ -0.48
GABRB3-213ENST00000557765 SRCAPQ6ZRS2 3230 aa12.02□□□□□ -0.48
GABRB3-213ENST00000557765 OTOFQ9HC10 1997 aa12.02□□□□□ -0.49
GABRB3-213ENST00000557765 M0R2N6 131 aa12.02□□□□□ -0.49
GABRB3-213ENST00000557765 VWA5AO00534 786 aa12.02□□□□□ -0.49
GABRB3-213ENST00000557765 SLC26A4O43511 780 aa12.02□□□□□ -0.49
GABRB3-213ENST00000557765 MCM4P33991 863 aa12.02□□□□□ -0.49
GABRB3-213ENST00000557765 HMGCS2P54868 508 aa12.02□□□□□ -0.49
GABRB3-213ENST00000557765 CCNA1P78396 465 aa12.02□□□□□ -0.49
GABRB3-213ENST00000557765 IRX3P78415 501 aaPredicted RBP12.02□□□□□ -0.49
GABRB3-213ENST00000557765 NONOQ15233 471 aaKnown RBP eCLIP12.02□□□□□ -0.49
GABRB3-213ENST00000557765 PRAMEF18Q5VWM3 479 aa12.02□□□□□ -0.49
GABRB3-213ENST00000557765 HOMER1Q86YM7 354 aa12.02□□□□□ -0.49
GABRB3-213ENST00000557765 RAB11FIP4Q86YS3 637 aa12.02□□□□□ -0.49
GABRB3-213ENST00000557765 CLEC10AQ8IUN9 316 aa12.02□□□□□ -0.49
GABRB3-213ENST00000557765 KCTD17Q8N5Z5 321 aa12.02□□□□□ -0.49
GABRB3-213ENST00000557765 SHCBP1Q8NEM2 672 aa12.02□□□□□ -0.49
GABRB3-213ENST00000557765 FERMT2Q96AC1 680 aa12.02□□□□□ -0.49
GABRB3-213ENST00000557765 CCDC34Q96HJ3 373 aa12.02□□□□□ -0.49
GABRB3-213ENST00000557765 MPHOSPH6Q99547 160 aaKnown RBP12.02□□□□□ -0.49
GABRB3-213ENST00000557765 UBA5Q9GZZ9 404 aa12.02□□□□□ -0.49
GABRB3-213ENST00000557765 VPS54Q9P1Q0 977 aa12.02□□□□□ -0.49
GABRB3-213ENST00000557765 RCOR1Q9UKL0 485 aa12.02□□□□□ -0.49
GABRB3-213ENST00000557765 ISY1Q9ULR0 285 aaKnown RBP12.02□□□□□ -0.49
GABRB3-213ENST00000557765 SPDYE3A6NKU9 549 aa12.01□□□□□ -0.49
GABRB3-213ENST00000557765 STAM2O75886 525 aa12.01□□□□□ -0.49
GABRB3-213ENST00000557765 ALDH1A1P00352 501 aa12.01□□□□□ -0.49
GABRB3-213ENST00000557765 PRPHP41219 470 aa12.01□□□□□ -0.49
GABRB3-213ENST00000557765 CLK2P49760 499 aaKnown RBP12.01□□□□□ -0.49
GABRB3-213ENST00000557765 UBE2HP62256 183 aa12.01□□□□□ -0.49
GABRB3-213ENST00000557765 SREBF2Q12772 1141 aa12.01□□□□□ -0.49
GABRB3-213ENST00000557765 SPRYD7Q5W111 196 aa12.01□□□□□ -0.49
GABRB3-213ENST00000557765 PPP4R3AQ6IN85 833 aa12.01□□□□□ -0.49
GABRB3-213ENST00000557765 SPICE1Q8N0Z3 855 aa12.01□□□□□ -0.49
GABRB3-213ENST00000557765 ZNF579Q8NAF0 562 aaKnown RBP12.01□□□□□ -0.49
GABRB3-213ENST00000557765 TNFRSF25Q93038 417 aa12.01□□□□□ -0.49
GABRB3-213ENST00000557765 OTUD5Q96G74 571 aa12.01□□□□□ -0.49
GABRB3-213ENST00000557765 WNK4Q96J92 1243 aa12.01□□□□□ -0.49
GABRB3-213ENST00000557765 ELP3Q9H9T3 547 aa12.01□□□□□ -0.49
GABRB3-213ENST00000557765 TLL2Q9Y6L7 1015 aa12.01□□□□□ -0.49
GABRB3-213ENST00000557765 PFASO15067 1338 aa12.01□□□□□ -0.49
GABRB3-213ENST00000557765 GOLGA6L4A6NEF3 574 aa12□□□□□ -0.49
GABRB3-213ENST00000557765 BTBD18B2RXH4 712 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms