RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 GJD2Q9UKL4 321 aa15.92■□□□□ 0.14
SHMT2-234ENST00000557703 FRMPD2Q68DX3 1309 aaPredicted RBP15.92■□□□□ 0.14
SHMT2-234ENST00000557703 MGAMO43451 1857 aa15.91■□□□□ 0.14
SHMT2-234ENST00000557703 DOCK3Q8IZD9 2030 aa15.91■□□□□ 0.14
SHMT2-234ENST00000557703 PTPREP23469 700 aa15.91■□□□□ 0.14
SHMT2-234ENST00000557703 GRB14Q14449 540 aa15.91■□□□□ 0.14
SHMT2-234ENST00000557703 MORN1Q5T089 497 aa15.91■□□□□ 0.14
SHMT2-234ENST00000557703 SNRNP48Q6IEG0 339 aaKnown RBP15.91■□□□□ 0.14
SHMT2-234ENST00000557703 TTBK2Q6IQ55 1244 aa15.91■□□□□ 0.14
SHMT2-234ENST00000557703 ADGRF4Q8IZF3 695 aa15.91■□□□□ 0.14
SHMT2-234ENST00000557703 RGS22Q8NE09 1264 aa15.91■□□□□ 0.14
SHMT2-234ENST00000557703 NUP133Q8WUM0 1156 aa15.91■□□□□ 0.14
SHMT2-234ENST00000557703 C22orf23Q9BZE7 217 aa15.91■□□□□ 0.14
SHMT2-234ENST00000557703 PORCNQ9H237 461 aa15.91■□□□□ 0.14
SHMT2-234ENST00000557703 PDRG1Q9NUG6 133 aa15.91■□□□□ 0.14
SHMT2-234ENST00000557703 RBM27Q9P2N5 1060 aaKnown RBP15.91■□□□□ 0.14
SHMT2-234ENST00000557703 DIS3Q9Y2L1 958 aaKnown RBP15.91■□□□□ 0.14
SHMT2-234ENST00000557703 NID2Q14112 1375 aa15.9■□□□□ 0.14
SHMT2-234ENST00000557703 ZBTB5O15062 677 aa15.9■□□□□ 0.14
SHMT2-234ENST00000557703 RGS2P41220 211 aa15.9■□□□□ 0.14
SHMT2-234ENST00000557703 KCTD2Q14681 263 aa15.9■□□□□ 0.14
SHMT2-234ENST00000557703 SAMD1Q6SPF0 538 aaPredicted RBP15.9■□□□□ 0.14
SHMT2-234ENST00000557703 NCAPG2Q86XI2 1143 aa15.9■□□□□ 0.14
SHMT2-234ENST00000557703 CPXCR1Q8N123 301 aa15.9■□□□□ 0.14
SHMT2-234ENST00000557703 SLAIN1Q8ND83 568 aa15.9■□□□□ 0.14
SHMT2-234ENST00000557703 RAET1EQ8TD07 263 aa15.9■□□□□ 0.14
SHMT2-234ENST00000557703 USP6NLQ92738 828 aa15.9■□□□□ 0.14
SHMT2-234ENST00000557703 BRF1Q92994 677 aa15.9■□□□□ 0.14
SHMT2-234ENST00000557703 BACH2Q9BYV9 841 aa15.9■□□□□ 0.14
SHMT2-234ENST00000557703 ARHGAP39Q9C0H5 1083 aa15.9■□□□□ 0.14
SHMT2-234ENST00000557703 ACAD9Q9H845 621 aa15.9■□□□□ 0.14
SHMT2-234ENST00000557703 SENP2Q9HC62 589 aa15.9■□□□□ 0.14
SHMT2-234ENST00000557703 MAP3K20Q9NYL2 800 aaKnown RBP15.9■□□□□ 0.14
SHMT2-234ENST00000557703 PFASO15067 1338 aa15.9■□□□□ 0.14
SHMT2-234ENST00000557703 ZNF536O15090 1300 aa15.9■□□□□ 0.14
SHMT2-234ENST00000557703 LOC102724159A0A0B4J2E5 919 aa15.89■□□□□ 0.13
SHMT2-234ENST00000557703 PNMA6FA0A0J9YX94 578 aa15.89■□□□□ 0.13
SHMT2-234ENST00000557703 KLF18A0A0U1RQI7 1052 aa15.89■□□□□ 0.13
SHMT2-234ENST00000557703 GOLGA8HP0CJ92 632 aa15.89■□□□□ 0.13
SHMT2-234ENST00000557703 CTGFP29279 349 aa15.89■□□□□ 0.13
SHMT2-234ENST00000557703 SLC16A2P36021 539 aa15.89■□□□□ 0.13
SHMT2-234ENST00000557703 FLT3LGP49771 235 aa15.89■□□□□ 0.13
SHMT2-234ENST00000557703 MAP2K5Q13163 448 aa15.89■□□□□ 0.13
SHMT2-234ENST00000557703 PWP2Q15269 919 aaKnown RBP15.89■□□□□ 0.13
SHMT2-234ENST00000557703 STAG2Q8N3U4 1231 aa15.89■□□□□ 0.13
SHMT2-234ENST00000557703 MSL3Q8N5Y2 521 aaKnown RBP15.89■□□□□ 0.13
SHMT2-234ENST00000557703 AMNQ9BXJ7 453 aa15.89■□□□□ 0.13
SHMT2-234ENST00000557703 LRRC2Q9BYS8 371 aa15.89■□□□□ 0.13
SHMT2-234ENST00000557703 UBA5Q9GZZ9 404 aa15.89■□□□□ 0.13
SHMT2-234ENST00000557703 JMJD4Q9H9V9 463 aa15.89■□□□□ 0.13
SHMT2-234ENST00000557703 RAVER2Q9HCJ3 691 aaKnown RBP15.89■□□□□ 0.13
SHMT2-234ENST00000557703 CCPG1Q9ULG6 757 aa15.89■□□□□ 0.13
SHMT2-234ENST00000557703 DHX16O60231 1041 aaKnown RBP15.88■□□□□ 0.13
SHMT2-234ENST00000557703 METAP2P50579 478 aaKnown RBP eCLIP15.88■□□□□ 0.132e-6■■■■□ 21
SHMT2-234ENST00000557703 CDC37Q16543 378 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-234ENST00000557703 RTN1Q16799 776 aa15.88■□□□□ 0.13
SHMT2-234ENST00000557703 WDR78Q5VTH9 848 aa15.88■□□□□ 0.13
SHMT2-234ENST00000557703 MICU3Q86XE3 530 aa15.88■□□□□ 0.13
SHMT2-234ENST00000557703 FBXO11Q86XK2 927 aa15.88■□□□□ 0.13
SHMT2-234ENST00000557703 MCF2L2Q86YR7 1114 aa15.88■□□□□ 0.13
SHMT2-234ENST00000557703 RRP36Q96EU6 259 aaKnown RBP15.88■□□□□ 0.13
SHMT2-234ENST00000557703 TRERF1Q96PN7 1200 aa15.88■□□□□ 0.13
SHMT2-234ENST00000557703 APBA2Q99767 749 aa15.88■□□□□ 0.13
SHMT2-234ENST00000557703 GPHNQ9NQX3 736 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-234ENST00000557703 SEC63Q9UGP8 760 aaKnown RBP15.88■□□□□ 0.13
SHMT2-234ENST00000557703 BRPF3Q9ULD4 1205 aa15.88■□□□□ 0.13
SHMT2-234ENST00000557703 MRPL11Q9Y3B7 192 aaKnown RBP15.88■□□□□ 0.13
SHMT2-234ENST00000557703 COL11A1P12107 1806 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-234ENST00000557703 ABCB11O95342 1321 aa15.88■□□□□ 0.13
SHMT2-234ENST00000557703 hCG_1984214I3L0E3 225 aa15.87■□□□□ 0.13
SHMT2-234ENST00000557703 PRKCZQ05513 592 aa15.87■□□□□ 0.13
SHMT2-234ENST00000557703 COL9A3Q14050 684 aaPredicted RBP15.87■□□□□ 0.13
SHMT2-234ENST00000557703 TOB2Q14106 344 aaPredicted RBP15.87■□□□□ 0.13
SHMT2-234ENST00000557703 COL13A1Q5TAT6 717 aaPredicted RBP15.87■□□□□ 0.13
SHMT2-234ENST00000557703 CPLX2Q6PUV4 134 aaKnown RBP15.87■□□□□ 0.13
SHMT2-234ENST00000557703 TMTC3Q6ZXV5 915 aa15.87■□□□□ 0.13
SHMT2-234ENST00000557703 ZNF467Q7Z7K2 595 aaPredicted RBP15.87■□□□□ 0.13
SHMT2-234ENST00000557703 DPP9Q86TI2 863 aa15.87■□□□□ 0.13
SHMT2-234ENST00000557703 ZNF713Q8N859 430 aaPredicted RBP15.87■□□□□ 0.13
SHMT2-234ENST00000557703 DDX11Q96FC9 970 aa15.87■□□□□ 0.13
SHMT2-234ENST00000557703 TCEANC2Q96MN5 208 aa15.87■□□□□ 0.13
SHMT2-234ENST00000557703 MMP19Q99542 508 aa15.87■□□□□ 0.13
SHMT2-234ENST00000557703 UPF3BQ9BZI7 483 aaKnown RBP15.87■□□□□ 0.13
SHMT2-234ENST00000557703 MCOLN1Q9GZU1 580 aa15.87■□□□□ 0.13
SHMT2-234ENST00000557703 ZNF236Q9UL36 1845 aa15.87■□□□□ 0.13
SHMT2-234ENST00000557703 GOLGA8AA7E2F4 631 aa15.86■□□□□ 0.13
SHMT2-234ENST00000557703 GOLGA8BA8MQT2 603 aa15.86■□□□□ 0.13
SHMT2-234ENST00000557703 ADCY3O60266 1144 aa15.86■□□□□ 0.13
SHMT2-234ENST00000557703 ALAS1P13196 640 aa15.86■□□□□ 0.13
SHMT2-234ENST00000557703 CPA1P15085 419 aa15.86■□□□□ 0.13
SHMT2-234ENST00000557703 ADORA2AP29274 412 aa15.86■□□□□ 0.13
SHMT2-234ENST00000557703 PDIA3P30101 505 aaKnown RBP15.86■□□□□ 0.13
SHMT2-234ENST00000557703 GRK4P32298 578 aa15.86■□□□□ 0.13
SHMT2-234ENST00000557703 NEK4P51957 841 aa15.86■□□□□ 0.13
SHMT2-234ENST00000557703 APOBRQ0VD83 1088 aa15.86■□□□□ 0.13
SHMT2-234ENST00000557703 RABEP1Q15276 862 aa15.86■□□□□ 0.13
SHMT2-234ENST00000557703 QRICH1Q2TAL8 776 aa15.86■□□□□ 0.13
SHMT2-234ENST00000557703 SLC9C1Q4G0N8 1177 aa15.86■□□□□ 0.13
SHMT2-234ENST00000557703 OLFML2BQ68BL8 750 aa15.86■□□□□ 0.13
SHMT2-234ENST00000557703 RASGRP2Q7LDG7 609 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms