RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 EXOC1Q9NV70 894 aa13.23□□□□□ -0.29
VIPAS39-211ENST00000557658 GGCXP38435 758 aa13.23□□□□□ -0.29
VIPAS39-211ENST00000557658 PMS1P54277 932 aaKnown RBP13.23□□□□□ -0.29
VIPAS39-211ENST00000557658 ZBED6P86452 979 aa13.23□□□□□ -0.29
VIPAS39-211ENST00000557658 CHRNDQ07001 517 aa13.23□□□□□ -0.29
VIPAS39-211ENST00000557658 NHEJ1Q9H9Q4 299 aaPredicted RBP13.23□□□□□ -0.29
VIPAS39-211ENST00000557658 CICQ96RK0 1608 aaPredicted RBP13.22□□□□□ -0.29
VIPAS39-211ENST00000557658 B4DLN1 442 aa13.22□□□□□ -0.29
VIPAS39-211ENST00000557658 IDEP14735 1019 aa13.22□□□□□ -0.29
VIPAS39-211ENST00000557658 DNAJC21Q5F1R6 531 aaKnown RBP13.22□□□□□ -0.29
VIPAS39-211ENST00000557658 DTHD1Q6ZMT9 781 aa13.22□□□□□ -0.29
VIPAS39-211ENST00000557658 BLIDQ8IZY5 108 aa13.22□□□□□ -0.29
VIPAS39-211ENST00000557658 FAM76AQ8TAV0 307 aa13.22□□□□□ -0.29
VIPAS39-211ENST00000557658 TUBGCP2Q9BSJ2 902 aa13.22□□□□□ -0.29
VIPAS39-211ENST00000557658 LACRTQ9GZZ8 138 aa13.22□□□□□ -0.29
VIPAS39-211ENST00000557658 JADE2Q9NQC1 790 aa13.22□□□□□ -0.29
VIPAS39-211ENST00000557658 SLIT2O94813 1529 aa13.22□□□□□ -0.29
VIPAS39-211ENST00000557658 ZMYND10O75800 440 aa13.22□□□□□ -0.29
VIPAS39-211ENST00000557658 RHOBTB3O94955 611 aa13.22□□□□□ -0.29
VIPAS39-211ENST00000557658 DYNLL1P63167 89 aaKnown RBP13.22□□□□□ -0.29
VIPAS39-211ENST00000557658 KIF5AQ12840 1032 aa13.22□□□□□ -0.29
VIPAS39-211ENST00000557658 FNBP4Q8N3X1 1017 aaPredicted RBP13.22□□□□□ -0.29
VIPAS39-211ENST00000557658 GIMAP8Q8ND71 665 aaPredicted RBP13.22□□□□□ -0.29
VIPAS39-211ENST00000557658 RIN2Q8WYP3 895 aaPredicted RBP13.22□□□□□ -0.29
VIPAS39-211ENST00000557658 DHTKD1Q96HY7 919 aaPredicted RBP13.22□□□□□ -0.29
VIPAS39-211ENST00000557658 GDAP1L1Q96MZ0 367 aa13.22□□□□□ -0.29
VIPAS39-211ENST00000557658 TSGA10Q9BZW7 698 aa13.22□□□□□ -0.29
VIPAS39-211ENST00000557658 TTYH3Q9C0H2 523 aa13.22□□□□□ -0.29
VIPAS39-211ENST00000557658 AGPAT5Q9NUQ2 364 aa13.22□□□□□ -0.29
VIPAS39-211ENST00000557658 CACNA1SQ13698 1873 aa13.21□□□□□ -0.29
VIPAS39-211ENST00000557658 KLRC4O43908 158 aa13.21□□□□□ -0.29
VIPAS39-211ENST00000557658 ORC4O43929 436 aa13.21□□□□□ -0.29
VIPAS39-211ENST00000557658 TBC1D8BQ0IIM8 1120 aa13.21□□□□□ -0.29
VIPAS39-211ENST00000557658 NAALADL2Q58DX5 795 aa13.21□□□□□ -0.29
VIPAS39-211ENST00000557658 TTI2Q6NXR4 508 aa13.21□□□□□ -0.29
VIPAS39-211ENST00000557658 BRINP3Q76B58 766 aa13.21□□□□□ -0.29
VIPAS39-211ENST00000557658 FAM114A1Q8IWE2 563 aa13.21□□□□□ -0.29
VIPAS39-211ENST00000557658 CSGALNACT2Q8N6G5 542 aa13.21□□□□□ -0.29
VIPAS39-211ENST00000557658 SECISBP2LQ93073 1101 aaKnown RBP13.21□□□□□ -0.29
VIPAS39-211ENST00000557658 PCMTD1Q96MG8 357 aaPredicted RBP13.21□□□□□ -0.29
VIPAS39-211ENST00000557658 PURBQ96QR8 312 aaKnown RBP13.21□□□□□ -0.29
VIPAS39-211ENST00000557658 FAM107BQ9H098 131 aa13.21□□□□□ -0.29
VIPAS39-211ENST00000557658 FAM184BQ9ULE4 1060 aa13.21□□□□□ -0.29
VIPAS39-211ENST00000557658 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.21□□□□□ -0.29
VIPAS39-211ENST00000557658 ZNF804BA4D1E1 1349 aa13.21□□□□□ -0.3
VIPAS39-211ENST00000557658 BCL9O00512 1426 aa13.21□□□□□ -0.3
VIPAS39-211ENST00000557658 GOLGA6BA6NDN3 693 aa13.21□□□□□ -0.3
VIPAS39-211ENST00000557658 RCCD1A6NED2 376 aa13.21□□□□□ -0.3
VIPAS39-211ENST00000557658 SHOX2O60902 331 aaPredicted RBP13.21□□□□□ -0.3
VIPAS39-211ENST00000557658 KIF5BP33176 963 aa13.21□□□□□ -0.3
VIPAS39-211ENST00000557658 UBA7P41226 1012 aa13.21□□□□□ -0.3
VIPAS39-211ENST00000557658 VAV2P52735 878 aa13.21□□□□□ -0.3
VIPAS39-211ENST00000557658 AMOTL1Q8IY63 956 aa13.21□□□□□ -0.3
VIPAS39-211ENST00000557658 EFCAB13Q8IY85 973 aa13.21□□□□□ -0.3
VIPAS39-211ENST00000557658 RUBCNQ92622 972 aa13.21□□□□□ -0.3
VIPAS39-211ENST00000557658 CCDC47Q96A33 483 aaKnown RBP13.21□□□□□ -0.3
VIPAS39-211ENST00000557658 RREB1Q92766 1687 aa13.2□□□□□ -0.3
VIPAS39-211ENST00000557658 BICDL2A1A5D9 508 aa13.2□□□□□ -0.3
VIPAS39-211ENST00000557658 MACROD2A1Z1Q3 448 aa13.2□□□□□ -0.3
VIPAS39-211ENST00000557658 GOLGA6CA6NDK9 693 aa13.2□□□□□ -0.3
VIPAS39-211ENST00000557658 USP17L12C9JPN9 530 aa13.2□□□□□ -0.3
VIPAS39-211ENST00000557658 USP17L21D6R901 530 aa13.2□□□□□ -0.3
VIPAS39-211ENST00000557658 AGPSO00116 658 aa13.2□□□□□ -0.3
VIPAS39-211ENST00000557658 PDE2AO00408 941 aaPredicted RBP13.2□□□□□ -0.3
VIPAS39-211ENST00000557658 ADAMTS3O15072 1205 aa13.2□□□□□ -0.3
VIPAS39-211ENST00000557658 ZNF185O15231 689 aa13.2□□□□□ -0.3
VIPAS39-211ENST00000557658 GOLGA6DP0CG33 693 aa13.2□□□□□ -0.3
VIPAS39-211ENST00000557658 MYBL2P10244 700 aa13.2□□□□□ -0.3
VIPAS39-211ENST00000557658 CDK17Q00537 523 aa13.2□□□□□ -0.3
VIPAS39-211ENST00000557658 C2orf54Q08AI8 447 aa13.2□□□□□ -0.3
VIPAS39-211ENST00000557658 SPA17Q15506 151 aa13.2□□□□□ -0.3
VIPAS39-211ENST00000557658 GSPT2Q8IYD1 628 aaKnown RBP13.2□□□□□ -0.3
VIPAS39-211ENST00000557658 MMGT1Q8N4V1 131 aa13.2□□□□□ -0.3
VIPAS39-211ENST00000557658 PLEKHA4Q9H4M7 779 aa13.2□□□□□ -0.3
VIPAS39-211ENST00000557658 SH3GLB2Q9NR46 395 aa13.2□□□□□ -0.3
VIPAS39-211ENST00000557658 GOLGA6AQ9NYA3 693 aa13.2□□□□□ -0.3
VIPAS39-211ENST00000557658 PCDHA4Q9UN74 947 aa13.2□□□□□ -0.3
VIPAS39-211ENST00000557658 NUTM2BA6NNL0 878 aaPredicted RBP13.2□□□□□ -0.3
VIPAS39-211ENST00000557658 NUTM2EB1AL46 878 aaPredicted RBP13.2□□□□□ -0.3
VIPAS39-211ENST00000557658 NMT2O60551 498 aa13.2□□□□□ -0.3
VIPAS39-211ENST00000557658 USO1O60763 962 aaKnown RBP13.2□□□□□ -0.3
VIPAS39-211ENST00000557658 TRIM58Q8NG06 486 aa13.2□□□□□ -0.3
VIPAS39-211ENST00000557658 AENQ8WTP8 325 aaKnown RBP13.2□□□□□ -0.3
VIPAS39-211ENST00000557658 DUSP9Q99956 384 aaKnown RBP13.2□□□□□ -0.3
VIPAS39-211ENST00000557658 CCSER1Q9C0I3 900 aa13.2□□□□□ -0.3
VIPAS39-211ENST00000557658 KBTBD4Q9NVX7 518 aa13.2□□□□□ -0.3
VIPAS39-211ENST00000557658 JRKLQ9Y4A0 524 aa13.2□□□□□ -0.3
VIPAS39-211ENST00000557658 A0A1B0GUL6 1792 aa13.2□□□□□ -0.3
VIPAS39-211ENST00000557658 CCDC194A0A1B0GVG4 234 aa13.19□□□□□ -0.3
VIPAS39-211ENST00000557658 A0A1W2PQJ5 194 aa13.19□□□□□ -0.3
VIPAS39-211ENST00000557658 TACC1O75410 805 aa13.19□□□□□ -0.3
VIPAS39-211ENST00000557658 VEGFAP15692 232 aaPredicted RBP13.19□□□□□ -0.3
VIPAS39-211ENST00000557658 CCNE1P24864 410 aa13.19□□□□□ -0.3
VIPAS39-211ENST00000557658 MTIF2P46199 727 aaKnown RBP13.19□□□□□ -0.3
VIPAS39-211ENST00000557658 GYG1P46976 350 aa13.19□□□□□ -0.3
VIPAS39-211ENST00000557658 PARP10Q53GL7 1025 aa13.19□□□□□ -0.3
VIPAS39-211ENST00000557658 FIGNQ5HY92 759 aa13.19□□□□□ -0.3
VIPAS39-211ENST00000557658 PACS2Q86VP3 889 aa13.19□□□□□ -0.3
VIPAS39-211ENST00000557658 P2RX5Q93086 422 aa13.19□□□□□ -0.3
VIPAS39-211ENST00000557658 IQCDQ96DY2 449 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms