RNA–Protein interactions for RNA: ENST00000557641.5

GABRB3-212, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 828 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-212ENST00000557641 SYDE2Q5VT97 1194 aa11.78□□□□□ -0.52
GABRB3-212ENST00000557641 ARMC9Q7Z3E5 817 aa11.78□□□□□ -0.52
GABRB3-212ENST00000557641 HEATR3Q7Z4Q2 680 aa11.78□□□□□ -0.52
GABRB3-212ENST00000557641 LDHDQ86WU2 507 aa11.78□□□□□ -0.52
GABRB3-212ENST00000557641 NOSTRINQ8IVI9 506 aa11.78□□□□□ -0.52
GABRB3-212ENST00000557641 ANKRD13AQ8IZ07 590 aa11.78□□□□□ -0.52
GABRB3-212ENST00000557641 BICD2Q8TD16 824 aa11.78□□□□□ -0.52
GABRB3-212ENST00000557641 ZKSCAN4Q969J2 545 aaPredicted RBP11.78□□□□□ -0.52
GABRB3-212ENST00000557641 C12orf42Q96LP6 360 aa11.78□□□□□ -0.52
GABRB3-212ENST00000557641 PIGSQ96S52 555 aa11.78□□□□□ -0.52
GABRB3-212ENST00000557641 VAT1LQ9HCJ6 419 aa11.78□□□□□ -0.52
GABRB3-212ENST00000557641 C6orf50Q9HD87 102 aa11.78□□□□□ -0.52
GABRB3-212ENST00000557641 VPS54Q9P1Q0 977 aa11.78□□□□□ -0.52
GABRB3-212ENST00000557641 PNMA2Q9UL42 364 aa11.78□□□□□ -0.52
GABRB3-212ENST00000557641 ISY1Q9ULR0 285 aaKnown RBP11.78□□□□□ -0.52
GABRB3-212ENST00000557641 hCG_1642624A0A1W2PR95 340 aa11.77□□□□□ -0.53
GABRB3-212ENST00000557641 UBE2Q2LH0YL09 131 aa11.77□□□□□ -0.53
GABRB3-212ENST00000557641 STXBP3O00186 592 aa11.77□□□□□ -0.53
GABRB3-212ENST00000557641 FDX1P10109 184 aa11.77□□□□□ -0.53
GABRB3-212ENST00000557641 NCLP19338 710 aaKnown RBP11.77□□□□□ -0.53
GABRB3-212ENST00000557641 NAPAP54920 295 aa11.77□□□□□ -0.53
GABRB3-212ENST00000557641 BACE1P56817 501 aa11.77□□□□□ -0.53
GABRB3-212ENST00000557641 IKQ13123 557 aaPredicted RBP11.77□□□□□ -0.53
GABRB3-212ENST00000557641 RILPL1Q5EBL4 403 aa11.77□□□□□ -0.53
GABRB3-212ENST00000557641 MYSM1Q5VVJ2 828 aa11.77□□□□□ -0.53
GABRB3-212ENST00000557641 WWC2Q6AWC2 1192 aa11.77□□□□□ -0.53
GABRB3-212ENST00000557641 MCTP2Q6DN12 878 aa11.77□□□□□ -0.53
GABRB3-212ENST00000557641 TTBK2Q6IQ55 1244 aa11.77□□□□□ -0.53
GABRB3-212ENST00000557641 RASGRP2Q7LDG7 609 aa11.77□□□□□ -0.53
GABRB3-212ENST00000557641 HOMER1Q86YM7 354 aa11.77□□□□□ -0.53
GABRB3-212ENST00000557641 TMEM121BQ9BXQ6 578 aaPredicted RBP11.77□□□□□ -0.53
GABRB3-212ENST00000557641 ZMYND12Q9H0C1 365 aa11.77□□□□□ -0.53
GABRB3-212ENST00000557641 RRAGCQ9HB90 399 aa11.77□□□□□ -0.53
GABRB3-212ENST00000557641 GJB4Q9NTQ9 266 aa11.77□□□□□ -0.53
GABRB3-212ENST00000557641 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.77□□□□□ -0.53
GABRB3-212ENST00000557641 PCDHA4Q9UN74 947 aa11.77□□□□□ -0.53
GABRB3-212ENST00000557641 KCNJ14Q9UNX9 436 aa11.77□□□□□ -0.53
GABRB3-212ENST00000557641 ZHX2Q9Y6X8 837 aa11.77□□□□□ -0.53
GABRB3-212ENST00000557641 ELP1O95163 1332 aa11.77□□□□□ -0.53
GABRB3-212ENST00000557641 BTBD18B2RXH4 712 aa11.76□□□□□ -0.53
GABRB3-212ENST00000557641 SLC16A2P36021 539 aa11.76□□□□□ -0.53
GABRB3-212ENST00000557641 PPATQ06203 517 aa11.76□□□□□ -0.53
GABRB3-212ENST00000557641 SPP2Q13103 211 aa11.76□□□□□ -0.53
GABRB3-212ENST00000557641 SH3D19Q5HYK7 790 aa11.76□□□□□ -0.53
GABRB3-212ENST00000557641 FAM83BQ5T0W9 1011 aa11.76□□□□□ -0.53
GABRB3-212ENST00000557641 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.76□□□□□ -0.53
GABRB3-212ENST00000557641 ERO1BQ86YB8 467 aa11.76□□□□□ -0.53
GABRB3-212ENST00000557641 BLIDQ8IZY5 108 aa11.76□□□□□ -0.53
GABRB3-212ENST00000557641 SPICE1Q8N0Z3 855 aa11.76□□□□□ -0.53
GABRB3-212ENST00000557641 PIBF1Q8WXW3 757 aa11.76□□□□□ -0.53
GABRB3-212ENST00000557641 ANP32EQ9BTT0 268 aa11.76□□□□□ -0.53
GABRB3-212ENST00000557641 AMNQ9BXJ7 453 aa11.76□□□□□ -0.53
GABRB3-212ENST00000557641 GLIS2Q9BZE0 524 aaPredicted RBP11.76□□□□□ -0.53
GABRB3-212ENST00000557641 POLR3EQ9NVU0 708 aa11.76□□□□□ -0.53
GABRB3-212ENST00000557641 RTEL1Q9NZ71 1219 aa11.76□□□□□ -0.53
GABRB3-212ENST00000557641 NOL7Q9UMY1 257 aaKnown RBP11.76□□□□□ -0.53
GABRB3-212ENST00000557641 SNCAIPQ9Y6H5 919 aa11.76□□□□□ -0.53
GABRB3-212ENST00000557641 KIF28PB7ZC32 967 aa11.75□□□□□ -0.53
GABRB3-212ENST00000557641 CXCL11O14625 94 aa11.75□□□□□ -0.53
GABRB3-212ENST00000557641 PRPF40AO75400 957 aaKnown RBP11.75□□□□□ -0.53
GABRB3-212ENST00000557641 YEATS4O95619 227 aa11.75□□□□□ -0.53
GABRB3-212ENST00000557641 TRAPPC10P48553 1259 aa11.75□□□□□ -0.53
GABRB3-212ENST00000557641 MRPL12P52815 198 aaKnown RBP11.75□□□□□ -0.53
GABRB3-212ENST00000557641 MTMR2Q13614 643 aa11.75□□□□□ -0.53
GABRB3-212ENST00000557641 PRKG1Q13976 671 aa11.75□□□□□ -0.53
GABRB3-212ENST00000557641 VGLL4Q14135 290 aa11.75□□□□□ -0.53
GABRB3-212ENST00000557641 TTLL12Q14166 644 aaPredicted RBP11.75□□□□□ -0.53
GABRB3-212ENST00000557641 ZYXQ15942 572 aaKnown RBP11.75□□□□□ -0.53
GABRB3-212ENST00000557641 CDC37Q16543 378 aaPredicted RBP11.75□□□□□ -0.53
GABRB3-212ENST00000557641 QRICH1Q2TAL8 776 aa11.75□□□□□ -0.53
GABRB3-212ENST00000557641 FBXO11Q86XK2 927 aa11.75□□□□□ -0.53
GABRB3-212ENST00000557641 PRPF38AQ8NAV1 312 aaKnown RBP11.75□□□□□ -0.53
GABRB3-212ENST00000557641 GPKOWQ92917 476 aaPredicted RBP eCLIP11.75□□□□□ -0.53
GABRB3-212ENST00000557641 SPATA32Q96LK8 384 aa11.75□□□□□ -0.53
GABRB3-212ENST00000557641 NUP88Q99567 741 aaPredicted RBP11.75□□□□□ -0.53
GABRB3-212ENST00000557641 CPVLQ9H3G5 476 aa11.75□□□□□ -0.53
GABRB3-212ENST00000557641 LMBRD1Q9NUN5 540 aa11.75□□□□□ -0.53
GABRB3-212ENST00000557641 TMOD4Q9NZQ9 345 aa11.75□□□□□ -0.53
GABRB3-212ENST00000557641 RCOR1Q9UKL0 485 aa11.75□□□□□ -0.53
GABRB3-212ENST00000557641 PRR12Q9ULL5 1215 aa11.75□□□□□ -0.53
GABRB3-212ENST00000557641 CNPY2Q9Y2B0 182 aa11.75□□□□□ -0.53
GABRB3-212ENST00000557641 AFG3L2Q9Y4W6 797 aa11.75□□□□□ -0.53
GABRB3-212ENST00000557641 MYH4Q9Y623 1939 aa11.74□□□□□ -0.53
GABRB3-212ENST00000557641 SMCO2A6NFE2 343 aa11.74□□□□□ -0.53
GABRB3-212ENST00000557641 SPDYE5A6NIY4 337 aa11.74□□□□□ -0.53
GABRB3-212ENST00000557641 BMP15O95972 392 aa11.74□□□□□ -0.53
GABRB3-212ENST00000557641 MBD3O95983 291 aa11.74□□□□□ -0.53
GABRB3-212ENST00000557641 NASPP49321 788 aaPredicted RBP11.74□□□□□ -0.53
GABRB3-212ENST00000557641 ADCY7P51828 1080 aa11.74□□□□□ -0.53
GABRB3-212ENST00000557641 NPY5RQ15761 445 aa11.74□□□□□ -0.53
GABRB3-212ENST00000557641 FOXD4L6Q3SYB3 417 aaPredicted RBP11.74□□□□□ -0.53
GABRB3-212ENST00000557641 KIAA1755Q5JYT7 1200 aa11.74□□□□□ -0.53
GABRB3-212ENST00000557641 LDLRAD1Q5T700 205 aa11.74□□□□□ -0.53
GABRB3-212ENST00000557641 FAM173BQ6P4H8 233 aa11.74□□□□□ -0.53
GABRB3-212ENST00000557641 FOXD4L3Q6VB84 417 aaPredicted RBP11.74□□□□□ -0.53
GABRB3-212ENST00000557641 KRT25Q7Z3Z0 450 aa11.74□□□□□ -0.53
GABRB3-212ENST00000557641 CCDC84Q86UT8 332 aaPredicted RBP11.74□□□□□ -0.53
GABRB3-212ENST00000557641 JMYQ8N9B5 988 aa11.74□□□□□ -0.53
GABRB3-212ENST00000557641 KCNG4Q8TDN1 519 aa11.74□□□□□ -0.53
GABRB3-212ENST00000557641 TNFRSF25Q93038 417 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms