RNA–Protein interactions for RNA: ENST00000557592.5

APEX1-220, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5

Gene APEX1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-220ENST00000557592 CMTR1Q8N1G2 835 aaKnown RBP13.19□□□□□ -0.3
APEX1-220ENST00000557592 CCDC82Q8N4S0 544 aa13.19□□□□□ -0.3
APEX1-220ENST00000557592 PIBF1Q8WXW3 757 aa13.19□□□□□ -0.3
APEX1-220ENST00000557592 ZNF274Q96GC6 653 aaPredicted RBP13.19□□□□□ -0.3
APEX1-220ENST00000557592 LZTS2Q9BRK4 669 aa13.19□□□□□ -0.3
APEX1-220ENST00000557592 TEX13BQ9BXU2 312 aa13.19□□□□□ -0.3
APEX1-220ENST00000557592 PORCNQ9H237 461 aa13.19□□□□□ -0.3
APEX1-220ENST00000557592 RANBP17Q9H2T7 1088 aaKnown RBP13.19□□□□□ -0.3
APEX1-220ENST00000557592 JMJD4Q9H9V9 463 aa13.19□□□□□ -0.3
APEX1-220ENST00000557592 EFCC1Q9HA90 598 aa13.19□□□□□ -0.3
APEX1-220ENST00000557592 CWC22Q9HCG8 908 aaKnown RBP13.19□□□□□ -0.3
APEX1-220ENST00000557592 HPS5Q9UPZ3 1129 aa13.19□□□□□ -0.3
APEX1-220ENST00000557592 ZNF536O15090 1300 aa13.18□□□□□ -0.3
APEX1-220ENST00000557592 CCDC196A0A1B0GTZ2 297 aa13.18□□□□□ -0.3
APEX1-220ENST00000557592 TNPO2O14787 897 aaKnown RBP13.18□□□□□ -0.3
APEX1-220ENST00000557592 ATP2A1O14983 1001 aa13.18□□□□□ -0.3
APEX1-220ENST00000557592 FMNL1O95466 1100 aaPredicted RBP13.18□□□□□ -0.3
APEX1-220ENST00000557592 ICAM1P05362 532 aa13.18□□□□□ -0.3
APEX1-220ENST00000557592 CTGFP29279 349 aa13.18□□□□□ -0.3
APEX1-220ENST00000557592 CDC27P30260 824 aa13.18□□□□□ -0.3
APEX1-220ENST00000557592 MAPK4P31152 587 aa13.18□□□□□ -0.3
APEX1-220ENST00000557592 FCGRTP55899 365 aa13.18□□□□□ -0.3
APEX1-220ENST00000557592 CCT2P78371 535 aaKnown RBP13.18□□□□□ -0.3
APEX1-220ENST00000557592 SLC35G1Q2M3R5 365 aa13.18□□□□□ -0.3
APEX1-220ENST00000557592 QRICH1Q2TAL8 776 aa13.18□□□□□ -0.3
APEX1-220ENST00000557592 NCAPG2Q86XI2 1143 aa13.18□□□□□ -0.3
APEX1-220ENST00000557592 HOMER1Q86YM7 354 aa13.18□□□□□ -0.3
APEX1-220ENST00000557592 RIOX2Q8IUF8 465 aa13.18□□□□□ -0.3
APEX1-220ENST00000557592 SRBD1Q8N5C6 995 aaKnown RBP13.18□□□□□ -0.3
APEX1-220ENST00000557592 TRIM47Q96LD4 638 aa13.18□□□□□ -0.3
APEX1-220ENST00000557592 AGBL1Q96MI9 1066 aa13.18□□□□□ -0.3
APEX1-220ENST00000557592 SPZ1Q9BXG8 430 aa13.18□□□□□ -0.3
APEX1-220ENST00000557592 RIOX1Q9H6W3 641 aa13.18□□□□□ -0.3
APEX1-220ENST00000557592 NCOA5Q9HCD5 579 aaKnown RBP13.18□□□□□ -0.3
APEX1-220ENST00000557592 HOMER2Q9NSB8 354 aa13.18□□□□□ -0.3
APEX1-220ENST00000557592 CCPG1Q9ULG6 757 aa13.18□□□□□ -0.3
APEX1-220ENST00000557592 TPCN1Q9ULQ1 816 aa13.18□□□□□ -0.3
APEX1-220ENST00000557592 SMCHD1A6NHR9 2005 aa13.17□□□□□ -0.3
APEX1-220ENST00000557592 DOCK3Q8IZD9 2030 aa13.17□□□□□ -0.3
APEX1-220ENST00000557592 CYTH3O43739 400 aa13.17□□□□□ -0.3
APEX1-220ENST00000557592 ST18O60284 1047 aa13.17□□□□□ -0.3
APEX1-220ENST00000557592 SLC25A27O95847 323 aa13.17□□□□□ -0.3
APEX1-220ENST00000557592 ALAS1P13196 640 aa13.17□□□□□ -0.3
APEX1-220ENST00000557592 TAL1P17542 331 aaPredicted RBP13.17□□□□□ -0.3
APEX1-220ENST00000557592 ERCC3P19447 782 aa13.17□□□□□ -0.3
APEX1-220ENST00000557592 COPB2P35606 906 aa13.17□□□□□ -0.3
APEX1-220ENST00000557592 ADD1P35611 737 aaKnown RBP13.17□□□□□ -0.3
APEX1-220ENST00000557592 CAP1Q01518 475 aa13.17□□□□□ -0.3
APEX1-220ENST00000557592 ARHGEF6Q15052 776 aa13.17□□□□□ -0.3
APEX1-220ENST00000557592 PPP2R5BQ15173 497 aa13.17□□□□□ -0.3
APEX1-220ENST00000557592 SHCBP1Q8NEM2 672 aa13.17□□□□□ -0.3
APEX1-220ENST00000557592 RRP36Q96EU6 259 aaKnown RBP13.17□□□□□ -0.3
APEX1-220ENST00000557592 PIGSQ96S52 555 aa13.17□□□□□ -0.3
APEX1-220ENST00000557592 MROH8Q9H579 483 aa13.17□□□□□ -0.3
APEX1-220ENST00000557592 FAM217BQ9NTX9 383 aaPredicted RBP13.17□□□□□ -0.3
APEX1-220ENST00000557592 NID2Q14112 1375 aa13.17□□□□□ -0.3
APEX1-220ENST00000557592 PLXNB2O15031 1838 aa13.16□□□□□ -0.3
APEX1-220ENST00000557592 ZBTB5O15062 677 aa13.16□□□□□ -0.3
APEX1-220ENST00000557592 SMARCA1P28370 1054 aa13.16□□□□□ -0.3
APEX1-220ENST00000557592 USH1GQ495M9 461 aa13.16□□□□□ -0.3
APEX1-220ENST00000557592 GPR142Q7Z601 462 aa13.16□□□□□ -0.3
APEX1-220ENST00000557592 PLEKHH3Q7Z736 793 aa13.16□□□□□ -0.3
APEX1-220ENST00000557592 FBXO11Q86XK2 927 aa13.16□□□□□ -0.3
APEX1-220ENST00000557592 COA7Q96BR5 231 aa13.16□□□□□ -0.3
APEX1-220ENST00000557592 MTMR8Q96EF0 704 aa13.16□□□□□ -0.3
APEX1-220ENST00000557592 SLKQ9H2G2 1235 aaPredicted RBP13.16□□□□□ -0.3
APEX1-220ENST00000557592 PRDM10Q9NQV6 1147 aa13.16□□□□□ -0.3
APEX1-220ENST00000557592 SEC63Q9UGP8 760 aaKnown RBP13.16□□□□□ -0.3
APEX1-220ENST00000557592 RIPK3Q9Y572 518 aa13.16□□□□□ -0.3
APEX1-220ENST00000557592 IVNS1ABPQ9Y6Y0 642 aa13.16□□□□□ -0.3
APEX1-220ENST00000557592 CNTNAP5Q8WYK1 1306 aa13.15□□□□□ -0.3
APEX1-220ENST00000557592 PNMA6FA0A0J9YX94 578 aa13.15□□□□□ -0.3
APEX1-220ENST00000557592 hCG_1642624A0A1W2PR95 340 aa13.15□□□□□ -0.3
APEX1-220ENST00000557592 CPLX1O14810 134 aa13.15□□□□□ -0.3
APEX1-220ENST00000557592 PFKFB2O60825 505 aa13.15□□□□□ -0.3
APEX1-220ENST00000557592 LARGE1O95461 756 aa13.15□□□□□ -0.3
APEX1-220ENST00000557592 TKFCQ3LXA3 575 aa13.15□□□□□ -0.3
APEX1-220ENST00000557592 OTOP1Q7RTM1 612 aa13.15□□□□□ -0.3
APEX1-220ENST00000557592 CHST13Q8NET6 341 aa13.15□□□□□ -0.3
APEX1-220ENST00000557592 TRERF1Q96PN7 1200 aa13.15□□□□□ -0.3
APEX1-220ENST00000557592 ACAD9Q9H845 621 aa13.15□□□□□ -0.3
APEX1-220ENST00000557592 RNF146Q9NTX7 359 aa13.15□□□□□ -0.3
APEX1-220ENST00000557592 PNMA2Q9UL42 364 aa13.15□□□□□ -0.3
APEX1-220ENST00000557592 LIMCH1Q9UPQ0 1083 aa13.15□□□□□ -0.3
APEX1-220ENST00000557592 TRIM17Q9Y577 477 aa13.15□□□□□ -0.3
APEX1-220ENST00000557592 PPP1R11O60927 126 aaPredicted RBP13.14□□□□□ -0.31
APEX1-220ENST00000557592 PPFIA3O75145 1194 aa13.14□□□□□ -0.31
APEX1-220ENST00000557592 GNRH1P01148 92 aa13.14□□□□□ -0.31
APEX1-220ENST00000557592 FCER1AP12319 257 aa13.14□□□□□ -0.31
APEX1-220ENST00000557592 HOXD10P28358 340 aa13.14□□□□□ -0.31
APEX1-220ENST00000557592 FUT2Q10981 343 aa13.14□□□□□ -0.31
APEX1-220ENST00000557592 SCRN1Q12765 414 aa13.14□□□□□ -0.31
APEX1-220ENST00000557592 ME3Q16798 604 aa13.14□□□□□ -0.31
APEX1-220ENST00000557592 MUM1L1Q5H9M0 696 aa13.14□□□□□ -0.31
APEX1-220ENST00000557592 CTU1Q7Z7A3 348 aaKnown RBP13.14□□□□□ -0.31
APEX1-220ENST00000557592 NECAB1Q8N987 351 aa13.14□□□□□ -0.31
APEX1-220ENST00000557592 IL27Q8NEV9 243 aa13.14□□□□□ -0.31
APEX1-220ENST00000557592 MMP19Q99542 508 aa13.14□□□□□ -0.31
APEX1-220ENST00000557592 AMNQ9BXJ7 453 aa13.14□□□□□ -0.31
APEX1-220ENST00000557592 FBXO40Q9UH90 709 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms