RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 ZC3H12BQ5HYM0 836 aaKnown RBP6.55□□□□□ -1.36
MTHFD1-216ENST00000557539 TXNDC11Q6PKC3 985 aa6.55□□□□□ -1.36
MTHFD1-216ENST00000557539 SHISA2Q6UWI4 295 aa6.55□□□□□ -1.36
MTHFD1-216ENST00000557539 DDX42Q86XP3 938 aaKnown RBP eCLIP6.55□□□□□ -1.36
MTHFD1-216ENST00000557539 DMRTC2Q8IXT2 367 aaPredicted RBP6.55□□□□□ -1.36
MTHFD1-216ENST00000557539 UBR7Q8N806 425 aa6.55□□□□□ -1.36
MTHFD1-216ENST00000557539 KLHL6Q8WZ60 621 aa6.55□□□□□ -1.36
MTHFD1-216ENST00000557539 PSMD1Q99460 953 aa6.55□□□□□ -1.36
MTHFD1-216ENST00000557539 EPN3Q9H201 632 aa6.55□□□□□ -1.36
MTHFD1-216ENST00000557539 SOX17Q9H6I2 414 aaPredicted RBP6.55□□□□□ -1.36
MTHFD1-216ENST00000557539 CAAP1Q9H8G2 361 aa6.55□□□□□ -1.36
MTHFD1-216ENST00000557539 CNNM2Q9H8M5 875 aa6.55□□□□□ -1.36
MTHFD1-216ENST00000557539 FRRS1LQ9P0K9 344 aa6.55□□□□□ -1.36
MTHFD1-216ENST00000557539 GABBR1Q9UBS5 961 aa6.55□□□□□ -1.36
MTHFD1-216ENST00000557539 ARHGEF28Q8N1W1 1705 aaKnown RBP6.55□□□□□ -1.36
MTHFD1-216ENST00000557539 SLIT1O75093 1534 aa6.55□□□□□ -1.36
MTHFD1-216ENST00000557539 UNC80Q8N2C7 3258 aa6.54□□□□□ -1.36
MTHFD1-216ENST00000557539 PRAMEF27A3QJZ7 478 aa6.54□□□□□ -1.36
MTHFD1-216ENST00000557539 DCDC2CA8MYV0 355 aa6.54□□□□□ -1.36
MTHFD1-216ENST00000557539 TNFRSF10CO14798 259 aa6.54□□□□□ -1.36
MTHFD1-216ENST00000557539 PDE8AO60658 829 aa6.54□□□□□ -1.36
MTHFD1-216ENST00000557539 RGS9O75916 674 aaPredicted RBP6.54□□□□□ -1.36
MTHFD1-216ENST00000557539 POU3F3P20264 500 aaPredicted RBP6.54□□□□□ -1.36
MTHFD1-216ENST00000557539 MAOBP27338 520 aa6.54□□□□□ -1.36
MTHFD1-216ENST00000557539 SOX5P35711 763 aa6.54□□□□□ -1.36
MTHFD1-216ENST00000557539 ARL4DP49703 201 aa6.54□□□□□ -1.36
MTHFD1-216ENST00000557539 NFKB2Q00653 900 aa6.54□□□□□ -1.36
MTHFD1-216ENST00000557539 EXOSC10Q01780 885 aaKnown RBP6.54□□□□□ -1.36
MTHFD1-216ENST00000557539 C19orf57Q0VDD7 668 aa6.54□□□□□ -1.36
MTHFD1-216ENST00000557539 ADGRE1Q14246 886 aa6.54□□□□□ -1.36
MTHFD1-216ENST00000557539 PDE3AQ14432 1141 aa6.54□□□□□ -1.36
MTHFD1-216ENST00000557539 SV2CQ496J9 727 aa6.54□□□□□ -1.36
MTHFD1-216ENST00000557539 CDCP2Q5VXM1 449 aa6.54□□□□□ -1.36
MTHFD1-216ENST00000557539 FOXB2Q5VYV0 432 aa6.54□□□□□ -1.36
MTHFD1-216ENST00000557539 SGSM3Q96HU1 749 aa6.54□□□□□ -1.36
MTHFD1-216ENST00000557539 NACC1Q96RE7 527 aa6.54□□□□□ -1.36
MTHFD1-216ENST00000557539 CDC6Q99741 560 aa6.54□□□□□ -1.36
MTHFD1-216ENST00000557539 MCOLN1Q9GZU1 580 aa6.54□□□□□ -1.36
MTHFD1-216ENST00000557539 TCEAL9Q9UHQ7 104 aa6.54□□□□□ -1.36
MTHFD1-216ENST00000557539 THRAP3Q9Y2W1 955 aaKnown RBP6.54□□□□□ -1.36
MTHFD1-216ENST00000557539 CSADQ9Y600 493 aa6.54□□□□□ -1.36
MTHFD1-216ENST00000557539 CROCC2H7BZ55 1655 aa6.54□□□□□ -1.36
MTHFD1-216ENST00000557539 MARF1Q9Y4F3 1742 aaKnown RBP6.53□□□□□ -1.36
MTHFD1-216ENST00000557539 KIF27Q86VH2 1401 aa6.53□□□□□ -1.36
MTHFD1-216ENST00000557539 A0A087X0B3 334 aa6.53□□□□□ -1.36
MTHFD1-216ENST00000557539 CCDC163A0A0D9SF12 145 aa6.53□□□□□ -1.36
MTHFD1-216ENST00000557539 CCDC194A0A1B0GVG4 234 aa6.53□□□□□ -1.36
MTHFD1-216ENST00000557539 CHURC1-FNTBB4DL54 471 aa6.53□□□□□ -1.36
MTHFD1-216ENST00000557539 C9orf172C9J069 976 aa6.53□□□□□ -1.36
MTHFD1-216ENST00000557539 AGRPO00253 132 aa6.53□□□□□ -1.36
MTHFD1-216ENST00000557539 ZNF862O60290 1169 aa6.53□□□□□ -1.36
MTHFD1-216ENST00000557539 PGRP06401 933 aa6.53□□□□□ -1.36
MTHFD1-216ENST00000557539 ELNP15502 786 aa6.53□□□□□ -1.36
MTHFD1-216ENST00000557539 RAG1P15918 1043 aa6.53□□□□□ -1.36
MTHFD1-216ENST00000557539 LIG1P18858 919 aa6.53□□□□□ -1.36
MTHFD1-216ENST00000557539 MBTPS1Q14703 1052 aa6.53□□□□□ -1.36
MTHFD1-216ENST00000557539 FOXD4L6Q3SYB3 417 aaPredicted RBP6.53□□□□□ -1.36
MTHFD1-216ENST00000557539 AXDND1Q5T1B0 1012 aaPredicted RBP6.53□□□□□ -1.36
MTHFD1-216ENST00000557539 FOXD4L3Q6VB84 417 aaPredicted RBP6.53□□□□□ -1.36
MTHFD1-216ENST00000557539 CYFIP1Q7L576 1253 aa6.53□□□□□ -1.36
MTHFD1-216ENST00000557539 FMR1NBQ8N0W7 255 aaPredicted RBP6.53□□□□□ -1.36
MTHFD1-216ENST00000557539 IL22RA1Q8N6P7 574 aa6.53□□□□□ -1.36
MTHFD1-216ENST00000557539 SMC1BQ8NDV3 1235 aa6.53□□□□□ -1.36
MTHFD1-216ENST00000557539 LENG1Q96BZ8 264 aaPredicted RBP6.53□□□□□ -1.36
MTHFD1-216ENST00000557539 CCDC136Q96JN2 1154 aa6.53□□□□□ -1.36
MTHFD1-216ENST00000557539 KRT82Q9NSB4 513 aa6.53□□□□□ -1.36
MTHFD1-216ENST00000557539 FAM86C1Q9NVL1 165 aa6.53□□□□□ -1.36
MTHFD1-216ENST00000557539 ARHGAP5Q13017 1502 aa6.53□□□□□ -1.36
MTHFD1-216ENST00000557539 WASHC2CQ9Y4E1 1318 aa6.52□□□□□ -1.37
MTHFD1-216ENST00000557539 TET3O43151 1660 aa6.52□□□□□ -1.37
MTHFD1-216ENST00000557539 LINC01387J3KSC0 135 aa6.52□□□□□ -1.37
MTHFD1-216ENST00000557539 DYRK3O43781 588 aa6.52□□□□□ -1.37
MTHFD1-216ENST00000557539 PEX14O75381 377 aa6.52□□□□□ -1.37
MTHFD1-216ENST00000557539 RFPL3O75679 317 aa6.52□□□□□ -1.37
MTHFD1-216ENST00000557539 POLR2BP30876 1174 aaKnown RBP6.52□□□□□ -1.37
MTHFD1-216ENST00000557539 GRK4P32298 578 aa6.52□□□□□ -1.37
MTHFD1-216ENST00000557539 FAM209AQ5JX71 171 aa6.52□□□□□ -1.37
MTHFD1-216ENST00000557539 TMEM201Q5SNT2 666 aa6.52□□□□□ -1.37
MTHFD1-216ENST00000557539 MSL1Q68DK7 614 aa6.52□□□□□ -1.37
MTHFD1-216ENST00000557539 FAM117BQ6P1L5 589 aa6.52□□□□□ -1.37
MTHFD1-216ENST00000557539 C12orf40Q86WS4 652 aa6.52□□□□□ -1.37
MTHFD1-216ENST00000557539 RAVER1Q8IY67 606 aaKnown RBP6.52□□□□□ -1.37
MTHFD1-216ENST00000557539 CACTIN-AS1Q8N1I8 211 aa6.52□□□□□ -1.37
MTHFD1-216ENST00000557539 WDR89Q96FK6 387 aaPredicted RBP6.52□□□□□ -1.37
MTHFD1-216ENST00000557539 EXOC2Q96KP1 924 aa6.52□□□□□ -1.37
MTHFD1-216ENST00000557539 IPO9Q96P70 1041 aaKnown RBP6.52□□□□□ -1.37
MTHFD1-216ENST00000557539 KIF2CQ99661 725 aa6.52□□□□□ -1.37
MTHFD1-216ENST00000557539 DHRS4Q9BTZ2 278 aa6.52□□□□□ -1.37
MTHFD1-216ENST00000557539 NCOA5Q9HCD5 579 aaKnown RBP6.52□□□□□ -1.37
MTHFD1-216ENST00000557539 STK32BQ9NY57 414 aa6.52□□□□□ -1.37
MTHFD1-216ENST00000557539 MCM8Q9UJA3 840 aa6.52□□□□□ -1.37
MTHFD1-216ENST00000557539 ZNF214Q9UL59 606 aaPredicted RBP6.52□□□□□ -1.37
MTHFD1-216ENST00000557539 RIPOR2Q9Y4F9 1068 aa6.52□□□□□ -1.37
MTHFD1-216ENST00000557539 TACC3Q9Y6A5 838 aa6.52□□□□□ -1.37
MTHFD1-216ENST00000557539 UBR1Q8IWV7 1749 aa6.52□□□□□ -1.37
MTHFD1-216ENST00000557539 MST1RQ04912 1400 aa6.51□□□□□ -1.37
MTHFD1-216ENST00000557539 EHBP1L1Q8N3D4 1523 aa6.51□□□□□ -1.37
MTHFD1-216ENST00000557539 TULP4Q9NRJ4 1543 aa6.51□□□□□ -1.37
MTHFD1-216ENST00000557539 VCANP13611 3396 aa6.51□□□□□ -1.37
MTHFD1-216ENST00000557539 COL22A1Q8NFW1 1626 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms