RNA–Protein interactions for RNA: ENST00000557428.1

PCNX1-215, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 541 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-215ENST00000557428 CPXCR1Q8N123 301 aa9.72□□□□□ -0.85
PCNX1-215ENST00000557428 LCORLQ8N3X6 602 aa9.72□□□□□ -0.85
PCNX1-215ENST00000557428 SCLYQ96I15 445 aa9.72□□□□□ -0.85
PCNX1-215ENST00000557428 DNAJC2Q99543 621 aaKnown RBP9.72□□□□□ -0.85
PCNX1-215ENST00000557428 ARMT1Q9H993 441 aa9.72□□□□□ -0.85
PCNX1-215ENST00000557428 DCP1AQ9NPI6 582 aaPredicted RBP9.72□□□□□ -0.85
PCNX1-215ENST00000557428 ZNF214Q9UL59 606 aaPredicted RBP9.72□□□□□ -0.85
PCNX1-215ENST00000557428 ISY1Q9ULR0 285 aaKnown RBP9.72□□□□□ -0.85
PCNX1-215ENST00000557428 ZNF532Q9HCE3 1301 aa9.72□□□□□ -0.85
PCNX1-215ENST00000557428 PRRC2BQ5JSZ5 2229 aaKnown RBP9.71□□□□□ -0.85
PCNX1-215ENST00000557428 CCER2I3L3R5 266 aa9.71□□□□□ -0.86
PCNX1-215ENST00000557428 ERC2O15083 957 aa9.71□□□□□ -0.86
PCNX1-215ENST00000557428 IPO8O15397 1037 aaKnown RBP9.71□□□□□ -0.86
PCNX1-215ENST00000557428 CA3P07451 260 aa9.71□□□□□ -0.86
PCNX1-215ENST00000557428 ATP2A2P16615 1042 aaKnown RBP9.71□□□□□ -0.86
PCNX1-215ENST00000557428 GJA9P57773 515 aa9.71□□□□□ -0.86
PCNX1-215ENST00000557428 CXCL17Q6UXB2 119 aa9.71□□□□□ -0.86
PCNX1-215ENST00000557428 ARMCX2Q7L311 632 aa9.71□□□□□ -0.86
PCNX1-215ENST00000557428 DEFB128Q7Z7B8 93 aa9.71□□□□□ -0.86
PCNX1-215ENST00000557428 SIAH1Q8IUQ4 282 aa9.71□□□□□ -0.86
PCNX1-215ENST00000557428 STK11IPQ8N1F8 1099 aa9.71□□□□□ -0.86
PCNX1-215ENST00000557428 ANKRD35Q8N283 1001 aa9.71□□□□□ -0.86
PCNX1-215ENST00000557428 MSL3Q8N5Y2 521 aaKnown RBP9.71□□□□□ -0.86
PCNX1-215ENST00000557428 ARNTL2Q8WYA1 636 aa9.71□□□□□ -0.86
PCNX1-215ENST00000557428 ARHGAP45Q92619 1136 aa9.71□□□□□ -0.86
PCNX1-215ENST00000557428 EAF2Q96CJ1 260 aaPredicted RBP9.71□□□□□ -0.86
PCNX1-215ENST00000557428 SLF1Q9BQI6 1058 aa9.71□□□□□ -0.86
PCNX1-215ENST00000557428 TEX13BQ9BXU2 312 aa9.71□□□□□ -0.86
PCNX1-215ENST00000557428 HOMER2Q9NSB8 354 aa9.71□□□□□ -0.86
PCNX1-215ENST00000557428 PCDHA11Q9Y5I1 949 aa9.71□□□□□ -0.86
PCNX1-215ENST00000557428 MYH7P12883 1935 aa9.7□□□□□ -0.86
PCNX1-215ENST00000557428 GOLIM4O00461 696 aa9.7□□□□□ -0.86
PCNX1-215ENST00000557428 PRKAB2O43741 272 aa9.7□□□□□ -0.86
PCNX1-215ENST00000557428 MBD4O95243 580 aa9.7□□□□□ -0.86
PCNX1-215ENST00000557428 CDK8P49336 464 aa9.7□□□□□ -0.86
PCNX1-215ENST00000557428 ITGA7Q13683 1181 aa9.7□□□□□ -0.86
PCNX1-215ENST00000557428 TTF1Q15361 905 aaPredicted RBP9.7□□□□□ -0.86
PCNX1-215ENST00000557428 TMEM67Q5HYA8 995 aa9.7□□□□□ -0.86
PCNX1-215ENST00000557428 RPUSD2Q8IZ73 545 aaKnown RBP9.7□□□□□ -0.86
PCNX1-215ENST00000557428 TMEM57Q8N5G2 664 aa9.7□□□□□ -0.86
PCNX1-215ENST00000557428 REPS2Q8NFH8 660 aa9.7□□□□□ -0.86
PCNX1-215ENST00000557428 SSH3Q8TE77 659 aa9.7□□□□□ -0.86
PCNX1-215ENST00000557428 KIFC2Q96AC6 838 aa9.7□□□□□ -0.86
PCNX1-215ENST00000557428 UIMC1Q96RL1 719 aa9.7□□□□□ -0.86
PCNX1-215ENST00000557428 TRPV6Q9H1D0 765 aa9.7□□□□□ -0.86
PCNX1-215ENST00000557428 UPF3AQ9H1J1 476 aaKnown RBP9.7□□□□□ -0.86
PCNX1-215ENST00000557428 WNT8AQ9H1J5 351 aa9.7□□□□□ -0.86
PCNX1-215ENST00000557428 ABHD16BQ9H3Z7 469 aa9.7□□□□□ -0.86
PCNX1-215ENST00000557428 RAVER2Q9HCJ3 691 aaKnown RBP9.7□□□□□ -0.86
PCNX1-215ENST00000557428 RIPK3Q9Y572 518 aa9.7□□□□□ -0.86
PCNX1-215ENST00000557428 MTCH2Q9Y6C9 303 aa9.7□□□□□ -0.86
PCNX1-215ENST00000557428 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.69□□□□□ -0.86
PCNX1-215ENST00000557428 EPOPA6NHQ4 379 aa9.69□□□□□ -0.86
PCNX1-215ENST00000557428 SMIM22K7EJ46 135 aa9.69□□□□□ -0.86
PCNX1-215ENST00000557428 B4GALT4O60513 344 aa9.69□□□□□ -0.86
PCNX1-215ENST00000557428 ZBED4O75132 1171 aa9.69□□□□□ -0.86
PCNX1-215ENST00000557428 CD4P01730 458 aa9.69□□□□□ -0.86
PCNX1-215ENST00000557428 PTGS1P23219 599 aa9.69□□□□□ -0.86
PCNX1-215ENST00000557428 PSMC6P62333 389 aa9.69□□□□□ -0.86
PCNX1-215ENST00000557428 ATP8B2P98198 1209 aa9.69□□□□□ -0.86
PCNX1-215ENST00000557428 TNFAIP2Q03169 654 aa9.69□□□□□ -0.86
PCNX1-215ENST00000557428 TTLL4Q14679 1199 aa9.69□□□□□ -0.86
PCNX1-215ENST00000557428 MAMDC4Q6UXC1 1216 aa9.69□□□□□ -0.86
PCNX1-215ENST00000557428 TLK2Q86UE8 772 aa9.69□□□□□ -0.86
PCNX1-215ENST00000557428 CCDC144CPQ8IYA2 1237 aa9.69□□□□□ -0.86
PCNX1-215ENST00000557428 KHSRPQ92945 711 aaKnown RBP eCLIP9.69□□□□□ -0.86
PCNX1-215ENST00000557428 HLA-CQ95604 372 aa9.69□□□□□ -0.86
PCNX1-215ENST00000557428 DDRGK1Q96HY6 314 aa9.69□□□□□ -0.86
PCNX1-215ENST00000557428 CCDC17Q96LX7 622 aa9.69□□□□□ -0.86
PCNX1-215ENST00000557428 NOC4LQ9BVI4 516 aaKnown RBP9.69□□□□□ -0.86
PCNX1-215ENST00000557428 AP5M1Q9H0R1 490 aa9.69□□□□□ -0.86
PCNX1-215ENST00000557428 ADAMTS5Q9UNA0 930 aa9.69□□□□□ -0.86
PCNX1-215ENST00000557428 COG5Q9UP83 839 aa9.69□□□□□ -0.86
PCNX1-215ENST00000557428 EXOC6BQ9Y2D4 811 aa9.69□□□□□ -0.86
PCNX1-215ENST00000557428 TANC1Q9C0D5 1861 aa9.68□□□□□ -0.86
PCNX1-215ENST00000557428 DNAJC25-GNG10A0A024R161 153 aa9.68□□□□□ -0.86
PCNX1-215ENST00000557428 ZEB2O60315 1214 aa9.68□□□□□ -0.86
PCNX1-215ENST00000557428 FSCN1Q16658 493 aaKnown RBP9.68□□□□□ -0.86
PCNX1-215ENST00000557428 SLFNL1Q499Z3 407 aa9.68□□□□□ -0.86
PCNX1-215ENST00000557428 TMED8Q6PL24 325 aaPredicted RBP9.68□□□□□ -0.86
PCNX1-215ENST00000557428 C16orf86Q6ZW13 317 aa9.68□□□□□ -0.86
PCNX1-215ENST00000557428 ZNF467Q7Z7K2 595 aaPredicted RBP9.68□□□□□ -0.86
PCNX1-215ENST00000557428 TRMT2AQ8IZ69 625 aaKnown RBP9.68□□□□□ -0.86
PCNX1-215ENST00000557428 CHMP4CQ96CF2 233 aa9.68□□□□□ -0.86
PCNX1-215ENST00000557428 KANSL2Q9H9L4 492 aa9.68□□□□□ -0.86
PCNX1-215ENST00000557428 IL1RAPL2Q9NP60 686 aa9.68□□□□□ -0.86
PCNX1-215ENST00000557428 ARIH1Q9Y4X5 557 aaPredicted RBP9.68□□□□□ -0.86
PCNX1-215ENST00000557428 ASTN1O14525 1302 aa9.67□□□□□ -0.86
PCNX1-215ENST00000557428 GREB1LQ9C091 1923 aaPredicted RBP9.67□□□□□ -0.86
PCNX1-215ENST00000557428 USP17L12C9JPN9 530 aa9.67□□□□□ -0.86
PCNX1-215ENST00000557428 USP17L21D6R901 530 aa9.67□□□□□ -0.86
PCNX1-215ENST00000557428 DYNC1LI2O43237 492 aaPredicted RBP9.67□□□□□ -0.86
PCNX1-215ENST00000557428 TLL1O43897 1013 aa9.67□□□□□ -0.86
PCNX1-215ENST00000557428 CABYRO75952 493 aa9.67□□□□□ -0.86
PCNX1-215ENST00000557428 CYP2C9P11712 490 aa9.67□□□□□ -0.86
PCNX1-215ENST00000557428 ACTN1P12814 892 aa9.67□□□□□ -0.86
PCNX1-215ENST00000557428 SSTR3P32745 418 aaPredicted RBP9.67□□□□□ -0.86
PCNX1-215ENST00000557428 CNTN2Q02246 1040 aa9.67□□□□□ -0.86
PCNX1-215ENST00000557428 FAM47CQ5HY64 1035 aa9.67□□□□□ -0.86
PCNX1-215ENST00000557428 EEPD1Q7L9B9 569 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms