RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 CEP70Q8NHQ1 597 aa9.61□□□□□ -0.87
SYNE3-205ENST00000557275 USP26Q9BXU7 913 aa9.61□□□□□ -0.87
SYNE3-205ENST00000557275 C6orf229H3BNL8 230 aa9.61□□□□□ -0.87
SYNE3-205ENST00000557275 TMEM87BQ96K49 555 aa9.61□□□□□ -0.87
SYNE3-205ENST00000557275 CUL1Q13616 776 aa9.6□□□□□ -0.87
SYNE3-205ENST00000557275 CDC37L1Q7L3B6 337 aa9.6□□□□□ -0.87
SYNE3-205ENST00000557275 OTUD6AQ7L8S5 288 aa9.6□□□□□ -0.87
SYNE3-205ENST00000557275 ARHGEF10LQ9HCE6 1279 aa9.6□□□□□ -0.87
SYNE3-205ENST00000557275 TBC1D23Q9NUY8 699 aa9.6□□□□□ -0.87
SYNE3-205ENST00000557275 TTLL3Q9Y4R7 772 aa9.6□□□□□ -0.87
SYNE3-205ENST00000557275 ICE1Q9Y2F5 2266 aa9.6□□□□□ -0.87
SYNE3-205ENST00000557275 HNRNPCP07910 306 aaKnown RBP eCLIP9.6□□□□□ -0.87
SYNE3-205ENST00000557275 NR1H4Q96RI1 486 aaPredicted RBP9.6□□□□□ -0.87
SYNE3-205ENST00000557275 NOP56O00567 594 aaKnown RBP9.6□□□□□ -0.87
SYNE3-205ENST00000557275 CDH2P19022 906 aaPredicted RBP9.6□□□□□ -0.87
SYNE3-205ENST00000557275 U2AF2P26368 475 aaKnown RBP eCLIP9.6□□□□□ -0.873e-6■■■■□ 21.1
SYNE3-205ENST00000557275 POLE2P56282 527 aa9.6□□□□□ -0.87
SYNE3-205ENST00000557275 BEGAINQ9BUH8 593 aa9.6□□□□□ -0.87
SYNE3-205ENST00000557275 PRG3Q9Y2Y8 225 aaPredicted RBP9.6□□□□□ -0.87
SYNE3-205ENST00000557275 WBP4O75554 376 aaKnown RBP9.6□□□□□ -0.87
SYNE3-205ENST00000557275 ZBTB18Q99592 522 aa9.6□□□□□ -0.87
SYNE3-205ENST00000557275 CAPN11Q9UMQ6 739 aa9.6□□□□□ -0.87
SYNE3-205ENST00000557275 RRP15Q9Y3B9 282 aaKnown RBP9.6□□□□□ -0.87
SYNE3-205ENST00000557275 MAST3O60307 1309 aa9.6□□□□□ -0.87
SYNE3-205ENST00000557275 ARHGEF6Q15052 776 aa9.6□□□□□ -0.87
SYNE3-205ENST00000557275 MGARPQ8TDB4 240 aa9.6□□□□□ -0.87
SYNE3-205ENST00000557275 PTPREP23469 700 aa9.6□□□□□ -0.87
SYNE3-205ENST00000557275 NOD1Q9Y239 953 aa9.6□□□□□ -0.87
SYNE3-205ENST00000557275 PDE1BQ01064 536 aa9.6□□□□□ -0.87
SYNE3-205ENST00000557275 MMS22LQ6ZRQ5 1243 aa9.6□□□□□ -0.87
SYNE3-205ENST00000557275 TMEM60Q9H2L4 133 aa9.6□□□□□ -0.87
SYNE3-205ENST00000557275 DNM3Q9UQ16 869 aa9.6□□□□□ -0.87
SYNE3-205ENST00000557275 MYH9P35579 1960 aaKnown RBP9.6□□□□□ -0.87
SYNE3-205ENST00000557275 A6NJR5 290 aa9.6□□□□□ -0.87
SYNE3-205ENST00000557275 ZC3H12BQ5HYM0 836 aaKnown RBP9.6□□□□□ -0.87
SYNE3-205ENST00000557275 ARMC2Q8NEN0 867 aa9.6□□□□□ -0.87
SYNE3-205ENST00000557275 SKA2Q8WVK7 121 aaPredicted RBP9.6□□□□□ -0.87
SYNE3-205ENST00000557275 CARD6Q9BX69 1037 aa9.6□□□□□ -0.87
SYNE3-205ENST00000557275 KCNH3Q9ULD8 1083 aa9.6□□□□□ -0.87
SYNE3-205ENST00000557275 MROH2BQ7Z745 1585 aa9.6□□□□□ -0.87
SYNE3-205ENST00000557275 PDE6CP51160 858 aa9.6□□□□□ -0.87
SYNE3-205ENST00000557275 TRIM71Q2Q1W2 868 aaKnown RBP9.6□□□□□ -0.87
SYNE3-205ENST00000557275 SLC5A4Q9NY91 659 aa9.6□□□□□ -0.87
SYNE3-205ENST00000557275 MDM2Q00987 491 aaPredicted RBP9.6□□□□□ -0.87
SYNE3-205ENST00000557275 PPP2R5CQ13362 524 aa9.6□□□□□ -0.87
SYNE3-205ENST00000557275 SPDYE1Q8NFV5 336 aaPredicted RBP9.6□□□□□ -0.87
SYNE3-205ENST00000557275 SSH1Q8WYL5 1049 aa9.6□□□□□ -0.87
SYNE3-205ENST00000557275 TRIM31Q9BZY9 425 aa9.6□□□□□ -0.87
SYNE3-205ENST00000557275 KDM4CQ9H3R0 1056 aa9.6□□□□□ -0.87
SYNE3-205ENST00000557275 WARS2Q9UGM6 360 aaKnown RBP9.6□□□□□ -0.87
SYNE3-205ENST00000557275 ATP11BQ9Y2G3 1177 aa9.6□□□□□ -0.87
SYNE3-205ENST00000557275 AP1B1Q10567 949 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 ZBBXA8MT70 800 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 TOMM70O94826 608 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 KRT7P08729 469 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 SLC9A1P19634 815 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 ZNF280CQ8ND82 737 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 CCDC61Q9Y6R9 512 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 CAPN9O14815 690 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 PAMP19021 973 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 MORF4L2Q15014 288 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 TTLL7Q6ZT98 887 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 ZNF713Q8N859 430 aaPredicted RBP9.59□□□□□ -0.87
SYNE3-205ENST00000557275 GUCY1A3Q02108 690 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 DMTNQ08495 405 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 ICA1LQ8NDH6 482 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 C1orf112Q9NSG2 853 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 SPDYE16A6NNV3 312 aaPredicted RBP9.59□□□□□ -0.87
SYNE3-205ENST00000557275 CASP2P42575 452 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 SPDYE2Q495Y8 402 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 CHMP6Q96FZ7 201 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 LARP6Q9BRS8 491 aaKnown RBP9.59□□□□□ -0.87
SYNE3-205ENST00000557275 ESYT1Q9BSJ8 1104 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 METTL14Q9HCE5 456 aaKnown RBP9.59□□□□□ -0.87
SYNE3-205ENST00000557275 KAT6AQ92794 2004 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 ZBTB41Q5SVQ8 909 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 ZC3H18Q86VM9 953 aaKnown RBP9.59□□□□□ -0.87
SYNE3-205ENST00000557275 TEX11Q8IYF3 940 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 RETREG2Q8NC44 543 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 COG4Q9H9E3 785 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 VWA3AA6NCI4 1184 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 TNNC2P02585 160 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 MAGEA1P43355 309 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 PDE4DQ08499 809 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 PAG1Q9NWQ8 432 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 IQSEC3Q9UPP2 1182 aaPredicted RBP9.59□□□□□ -0.87
SYNE3-205ENST00000557275 ZBTB12Q9Y330 459 aaPredicted RBP9.59□□□□□ -0.87
SYNE3-205ENST00000557275 SLC4A4Q9Y6R1 1079 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 PLS1Q14651 629 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 RNF169Q8NCN4 708 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 MRPL44Q9H9J2 332 aaKnown RBP9.59□□□□□ -0.87
SYNE3-205ENST00000557275 PCDHB13Q9Y5F0 798 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 MSH6P52701 1360 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 SERPINB4P48594 390 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 ANO5Q75V66 913 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 KRT25Q7Z3Z0 450 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 EXOC8Q8IYI6 725 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 VPS39Q96JC1 886 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 MYD88Q99836 296 aa9.59□□□□□ -0.87
SYNE3-205ENST00000557275 SCG2P13521 617 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms