RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 BEX3Q00994 111 aa17.59■□□□□ 0.41
CHD8-211ENST00000556833 TFAP4Q01664 338 aa17.59■□□□□ 0.41
CHD8-211ENST00000556833 CTDSPL2Q05D32 466 aa17.59■□□□□ 0.41
CHD8-211ENST00000556833 CCDC174Q6PII3 467 aa17.59■□□□□ 0.41
CHD8-211ENST00000556833 NOL8Q76FK4 1167 aaKnown RBP17.59■□□□□ 0.41
CHD8-211ENST00000556833 KLHDC9Q8NEP7 349 aa17.59■□□□□ 0.41
CHD8-211ENST00000556833 NUP133Q8WUM0 1156 aa17.59■□□□□ 0.41
CHD8-211ENST00000556833 AGBL1Q96MI9 1066 aa17.59■□□□□ 0.41
CHD8-211ENST00000556833 NAPBQ9H115 298 aa17.59■□□□□ 0.41
CHD8-211ENST00000556833 VCANP13611 3396 aa17.59■□□□□ 0.41
CHD8-211ENST00000556833 LCTP09848 1927 aa17.59■□□□□ 0.41
CHD8-211ENST00000556833 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.58■□□□□ 0.4
CHD8-211ENST00000556833 NMT2O60551 498 aa17.58■□□□□ 0.4
CHD8-211ENST00000556833 ASGR1P07306 291 aa17.58■□□□□ 0.4
CHD8-211ENST00000556833 FOSL2P15408 326 aa17.58■□□□□ 0.4
CHD8-211ENST00000556833 PPARAQ07869 468 aa17.58■□□□□ 0.4
CHD8-211ENST00000556833 MAMDC4Q6UXC1 1216 aa17.58■□□□□ 0.4
CHD8-211ENST00000556833 KCTD1Q719H9 257 aa17.58■□□□□ 0.4
CHD8-211ENST00000556833 CCDC144CPQ8IYA2 1237 aa17.58■□□□□ 0.4
CHD8-211ENST00000556833 TSEN34Q9BSV6 310 aaKnown RBP17.58■□□□□ 0.4
CHD8-211ENST00000556833 PPP1R12CQ9BZL4 782 aa17.58■□□□□ 0.4
CHD8-211ENST00000556833 ZNF287Q9HBT7 754 aa17.58■□□□□ 0.4
CHD8-211ENST00000556833 DUSP11O75319 330 aaKnown RBP17.57■□□□□ 0.4
CHD8-211ENST00000556833 MCCP23508 829 aa17.57■□□□□ 0.4
CHD8-211ENST00000556833 PDE4BQ07343 736 aa17.57■□□□□ 0.4
CHD8-211ENST00000556833 GNASQ5JWF2 1037 aa17.57■□□□□ 0.4
CHD8-211ENST00000556833 CCSAPQ6IQ19 270 aaPredicted RBP17.57■□□□□ 0.4
CHD8-211ENST00000556833 MSL3Q8N5Y2 521 aaKnown RBP17.57■□□□□ 0.4
CHD8-211ENST00000556833 GMCL1P1Q8NEA9 526 aa17.57■□□□□ 0.4
CHD8-211ENST00000556833 NEDD1Q8NHV4 660 aa17.57■□□□□ 0.4
CHD8-211ENST00000556833 PI4K2BQ8TCG2 481 aa17.57■□□□□ 0.4
CHD8-211ENST00000556833 GLT1D1Q96MS3 346 aa17.57■□□□□ 0.4
CHD8-211ENST00000556833 NACAP1Q9BZK3 213 aa17.57■□□□□ 0.4
CHD8-211ENST00000556833 RNF146Q9NTX7 359 aa17.57■□□□□ 0.4
CHD8-211ENST00000556833 STX8Q9UNK0 236 aa17.57■□□□□ 0.4
CHD8-211ENST00000556833 PCDHB15Q9Y5E8 787 aa17.57■□□□□ 0.4
CHD8-211ENST00000556833 MYO9BQ13459 2157 aa17.57■□□□□ 0.4
CHD8-211ENST00000556833 GBF1Q92538 1859 aa17.56■□□□□ 0.4
CHD8-211ENST00000556833 PLIN4Q96Q06 1357 aa17.56■□□□□ 0.4
CHD8-211ENST00000556833 MOXD2PA6NHM9 499 aa17.56■□□□□ 0.4
CHD8-211ENST00000556833 ATP2A1O14983 1001 aa17.56■□□□□ 0.4
CHD8-211ENST00000556833 ACRP10323 421 aa17.56■□□□□ 0.4
CHD8-211ENST00000556833 ALAS1P13196 640 aa17.56■□□□□ 0.4
CHD8-211ENST00000556833 SLC1A4P43007 532 aa17.56■□□□□ 0.4
CHD8-211ENST00000556833 STAT2P52630 851 aa17.56■□□□□ 0.4
CHD8-211ENST00000556833 EEPD1Q7L9B9 569 aa17.56■□□□□ 0.4
CHD8-211ENST00000556833 ANKRD33Q7Z3H0 272 aa17.56■□□□□ 0.4
CHD8-211ENST00000556833 CHST13Q8NET6 341 aa17.56■□□□□ 0.4
CHD8-211ENST00000556833 MKL1Q969V6 931 aa17.56■□□□□ 0.4
CHD8-211ENST00000556833 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.56■□□□□ 0.4
CHD8-211ENST00000556833 ACAD9Q9H845 621 aa17.56■□□□□ 0.4
CHD8-211ENST00000556833 SPC25Q9HBM1 224 aa17.56■□□□□ 0.4
CHD8-211ENST00000556833 GRXCR1A8MXD5 290 aa17.55■□□□□ 0.4
CHD8-211ENST00000556833 DNAJB2P25686 324 aa17.55■□□□□ 0.4
CHD8-211ENST00000556833 ZMYM1Q5SVZ6 1142 aa17.55■□□□□ 0.4
CHD8-211ENST00000556833 ZNF467Q7Z7K2 595 aaPredicted RBP17.55■□□□□ 0.4
CHD8-211ENST00000556833 PURBQ96QR8 312 aaKnown RBP17.55■□□□□ 0.4
CHD8-211ENST00000556833 ABHD16BQ9H3Z7 469 aa17.55■□□□□ 0.4
CHD8-211ENST00000556833 A1CFQ9NQ94 594 aaKnown RBP17.55■□□□□ 0.4
CHD8-211ENST00000556833 FBXO40Q9UH90 709 aa17.55■□□□□ 0.4
CHD8-211ENST00000556833 TBX21Q9UL17 535 aa17.55■□□□□ 0.4
CHD8-211ENST00000556833 ZNF536O15090 1300 aa17.54■□□□□ 0.4
CHD8-211ENST00000556833 TTC41PQ6P2S7 1318 aa17.54■□□□□ 0.4
CHD8-211ENST00000556833 SOWAHBA6NEL2 793 aa17.54■□□□□ 0.4
CHD8-211ENST00000556833 TSPY2A6NKD2 308 aa17.54■□□□□ 0.4
CHD8-211ENST00000556833 ERC2O15083 957 aa17.54■□□□□ 0.4
CHD8-211ENST00000556833 TIMP1P01033 207 aa17.54■□□□□ 0.4
CHD8-211ENST00000556833 SLC3A2P08195 630 aaKnown RBP17.54■□□□□ 0.4
CHD8-211ENST00000556833 CSF2RAP15509 400 aa17.54■□□□□ 0.4
CHD8-211ENST00000556833 GRIN2CQ14957 1233 aa17.54■□□□□ 0.4
CHD8-211ENST00000556833 CCDC96Q2M329 555 aa17.54■□□□□ 0.4
CHD8-211ENST00000556833 LRRFIP1Q32MZ4 808 aaKnown RBP17.54■□□□□ 0.4
CHD8-211ENST00000556833 MUM1L1Q5H9M0 696 aa17.54■□□□□ 0.4
CHD8-211ENST00000556833 VPS53Q5VIR6 699 aa17.54■□□□□ 0.4
CHD8-211ENST00000556833 TRERF1Q96PN7 1200 aa17.54■□□□□ 0.4
CHD8-211ENST00000556833 KATNBL1Q9H079 304 aa17.54■□□□□ 0.4
CHD8-211ENST00000556833 ASTN1O14525 1302 aa17.53■□□□□ 0.4
CHD8-211ENST00000556833 A0A0U1RQG5 324 aaPredicted RBP17.53■□□□□ 0.4
CHD8-211ENST00000556833 CTAGE5O15320 804 aa17.53■□□□□ 0.4
CHD8-211ENST00000556833 FOXP2O15409 715 aa17.53■□□□□ 0.4
CHD8-211ENST00000556833 RANBP6O60518 1105 aaKnown RBP17.53■□□□□ 0.4
CHD8-211ENST00000556833 MX1P20591 662 aa17.53■□□□□ 0.4
CHD8-211ENST00000556833 CST5P28325 142 aaPredicted RBP17.53■□□□□ 0.4
CHD8-211ENST00000556833 CYP2C18P33260 490 aa17.53■□□□□ 0.4
CHD8-211ENST00000556833 PBX2P40425 430 aa17.53■□□□□ 0.4
CHD8-211ENST00000556833 GJA9P57773 515 aa17.53■□□□□ 0.4
CHD8-211ENST00000556833 TNFAIP2Q03169 654 aa17.53■□□□□ 0.4
CHD8-211ENST00000556833 TMEM63BQ5T3F8 832 aa17.53■□□□□ 0.4
CHD8-211ENST00000556833 CXCL17Q6UXB2 119 aa17.53■□□□□ 0.4
CHD8-211ENST00000556833 FBXO16Q8IX29 292 aaPredicted RBP17.53■□□□□ 0.4
CHD8-211ENST00000556833 FAM133AQ8N9E0 248 aa17.53■□□□□ 0.4
CHD8-211ENST00000556833 PCSK9Q8NBP7 692 aaKnown RBP17.53■□□□□ 0.4
CHD8-211ENST00000556833 STAG1Q8WVM7 1258 aa17.53■□□□□ 0.4
CHD8-211ENST00000556833 PPM1EQ8WY54 764 aa17.53■□□□□ 0.4
CHD8-211ENST00000556833 TOX2Q96NM4 488 aa17.53■□□□□ 0.4
CHD8-211ENST00000556833 UPF3AQ9H1J1 476 aaKnown RBP17.53■□□□□ 0.4
CHD8-211ENST00000556833 PDGFCQ9NRA1 345 aa17.53■□□□□ 0.4
CHD8-211ENST00000556833 TOMM22Q9NS69 142 aa17.53■□□□□ 0.4
CHD8-211ENST00000556833 ARVCFO00192 962 aa17.52■□□□□ 0.4
CHD8-211ENST00000556833 SLC16A2P36021 539 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms