RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 GSG1L2A8MUP6 293 aa15.13■□□□□ 0.01
SHMT2-223ENST00000556689 ACRP10323 421 aa15.13■□□□□ 0.01
SHMT2-223ENST00000556689 OAZ1P54368 228 aa15.13■□□□□ 0.01
SHMT2-223ENST00000556689 AKNAD1Q5T1N1 836 aa15.13■□□□□ 0.01
SHMT2-223ENST00000556689 PSRC1Q6PGN9 363 aaPredicted RBP15.13■□□□□ 0.01
SHMT2-223ENST00000556689 ARMCX2Q7L311 632 aa15.13■□□□□ 0.01
SHMT2-223ENST00000556689 FAM126BQ8IXS8 530 aa15.13■□□□□ 0.01
SHMT2-223ENST00000556689 MKL1Q969V6 931 aa15.13■□□□□ 0.01
SHMT2-223ENST00000556689 PPP1R12CQ9BZL4 782 aa15.13■□□□□ 0.01
SHMT2-223ENST00000556689 PRDM12Q9H4Q4 367 aa15.13■□□□□ 0.01
SHMT2-223ENST00000556689 MSRAQ9UJ68 235 aa15.13■□□□□ 0.01
SHMT2-223ENST00000556689 ADCY6O43306 1168 aa15.12■□□□□ 0.01
SHMT2-223ENST00000556689 NKX3-2P78367 333 aa15.12■□□□□ 0.01
SHMT2-223ENST00000556689 CCDC144CPQ8IYA2 1237 aa15.12■□□□□ 0.01
SHMT2-223ENST00000556689 FGD4Q96M96 766 aa15.12■□□□□ 0.01
SHMT2-223ENST00000556689 CHMP4BQ9H444 224 aaKnown RBP15.12■□□□□ 0.01
SHMT2-223ENST00000556689 ZNF287Q9HBT7 754 aa15.12■□□□□ 0.01
SHMT2-223ENST00000556689 IL23AQ9NPF7 189 aa15.12■□□□□ 0.01
SHMT2-223ENST00000556689 COG6Q9Y2V7 657 aa15.12■□□□□ 0.01
SHMT2-223ENST00000556689 MUC3AQ02505 3323 aa15.12■□□□□ 0.01
SHMT2-223ENST00000556689 COL11A1P12107 1806 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-223ENST00000556689 IGKV6D-41A0A0C4DH26 115 aa15.11■□□□□ 0.01
SHMT2-223ENST00000556689 CD4P01730 458 aa15.11■□□□□ 0.01
SHMT2-223ENST00000556689 FGBP02675 491 aa15.11■□□□□ 0.01
SHMT2-223ENST00000556689 FDX1P10109 184 aa15.11■□□□□ 0.01
SHMT2-223ENST00000556689 CYP2C18P33260 490 aa15.11■□□□□ 0.01
SHMT2-223ENST00000556689 TNFAIP2Q03169 654 aa15.11■□□□□ 0.01
SHMT2-223ENST00000556689 RAB30Q15771 203 aa15.11■□□□□ 0.01
SHMT2-223ENST00000556689 NOL8Q76FK4 1167 aaKnown RBP15.11■□□□□ 0.01
SHMT2-223ENST00000556689 HERVK_113Q902F9 699 aa15.11■□□□□ 0.01
SHMT2-223ENST00000556689 ASB2Q96Q27 587 aa15.11■□□□□ 0.01
SHMT2-223ENST00000556689 LRRCC1Q9C099 1032 aa15.11■□□□□ 0.01
SHMT2-223ENST00000556689 MTIF3Q9H2K0 278 aaKnown RBP15.11■□□□□ 0.01
SHMT2-223ENST00000556689 MTMR4Q9NYA4 1195 aa15.11■□□□□ 0.01
SHMT2-223ENST00000556689 SYNPO2Q9UMS6 1093 aa15.11■□□□□ 0.01
SHMT2-223ENST00000556689 BAZ2AQ9UIF9 1905 aaKnown RBP15.11■□□□□ 0.01
SHMT2-223ENST00000556689 PARP14Q460N5 1801 aa15.1■□□□□ 0.01
SHMT2-223ENST00000556689 CTAGE5O15320 804 aa15.1■□□□□ 0.01
SHMT2-223ENST00000556689 TTLL1O95922 423 aa15.1■□□□□ 0.01
SHMT2-223ENST00000556689 COL9A1P20849 921 aa15.1■□□□□ 0.01
SHMT2-223ENST00000556689 IGFBP4P22692 258 aa15.1■□□□□ 0.01
SHMT2-223ENST00000556689 MRPS5P82675 430 aaKnown RBP15.1■□□□□ 0.01
SHMT2-223ENST00000556689 BEX3Q00994 111 aa15.1■□□□□ 0.01
SHMT2-223ENST00000556689 CNTN2Q02246 1040 aa15.1■□□□□ 0.01
SHMT2-223ENST00000556689 SLFN13Q68D06 897 aa15.1■□□□□ 0.01
SHMT2-223ENST00000556689 GMCL1P1Q8NEA9 526 aa15.1■□□□□ 0.01
SHMT2-223ENST00000556689 OSBP2Q969R2 916 aa15.1■□□□□ 0.01
SHMT2-223ENST00000556689 CEP95Q96GE4 821 aa15.1■□□□□ 0.01
SHMT2-223ENST00000556689 KATNBL1Q9H079 304 aa15.1■□□□□ 0.01
SHMT2-223ENST00000556689 HOMER2Q9NSB8 354 aa15.1■□□□□ 0.01
SHMT2-223ENST00000556689 THEGQ9P2T0 379 aa15.1■□□□□ 0.01
SHMT2-223ENST00000556689 PLXNA1Q9UIW2 1896 aa15.1■□□□□ 0.01
SHMT2-223ENST00000556689 ASB14A6NK59 587 aa15.09■□□□□ 0.01
SHMT2-223ENST00000556689 PRDM1O75626 825 aa15.09■□□□□ 0.01
SHMT2-223ENST00000556689 CABYRO75952 493 aa15.09■□□□□ 0.01
SHMT2-223ENST00000556689 APPP05067 770 aa15.09■□□□□ 0.01
SHMT2-223ENST00000556689 BMP3P12645 472 aa15.09■□□□□ 0.01
SHMT2-223ENST00000556689 GNAT2P19087 354 aa15.09■□□□□ 0.01
SHMT2-223ENST00000556689 TDO2P48775 406 aa15.09■□□□□ 0.01
SHMT2-223ENST00000556689 ADGRE1Q14246 886 aa15.09■□□□□ 0.01
SHMT2-223ENST00000556689 CCDC85BQ15834 202 aaPredicted RBP15.09■□□□□ 0.01
SHMT2-223ENST00000556689 CXCL17Q6UXB2 119 aa15.09■□□□□ 0.01
SHMT2-223ENST00000556689 FAM133AQ8N9E0 248 aa15.09■□□□□ 0.01
SHMT2-223ENST00000556689 KBTBD3Q8NAB2 608 aa15.09■□□□□ 0.01
SHMT2-223ENST00000556689 SLC43A3Q8NBI5 491 aa15.09■□□□□ 0.01
SHMT2-223ENST00000556689 CHURC1Q8WUH1 139 aa15.09■□□□□ 0.01
SHMT2-223ENST00000556689 APPBP2Q92624 585 aa15.09■□□□□ 0.01
SHMT2-223ENST00000556689 AP5M1Q9H0R1 490 aa15.09■□□□□ 0.01
SHMT2-223ENST00000556689 HIPK3Q9H422 1215 aa15.09■□□□□ 0.01
SHMT2-223ENST00000556689 ACAD9Q9H845 621 aa15.09■□□□□ 0.01
SHMT2-223ENST00000556689 SLC28A3Q9HAS3 691 aa15.09■□□□□ 0.01
SHMT2-223ENST00000556689 ECHDC1Q9NTX5 307 aa15.09■□□□□ 0.01
SHMT2-223ENST00000556689 MYH8P13535 1937 aa15.09■□□□□ 0.01
SHMT2-223ENST00000556689 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.08■□□□□ 0
SHMT2-223ENST00000556689 PATL2C9JE40 543 aaKnown RBP15.08■□□□□ 0
SHMT2-223ENST00000556689 RNF113AO15541 343 aaKnown RBP15.08■□□□□ 0
SHMT2-223ENST00000556689 DYNC1LI2O43237 492 aaPredicted RBP15.08■□□□□ 0
SHMT2-223ENST00000556689 SMARCA5O60264 1052 aaPredicted RBP15.08■□□□□ 0
SHMT2-223ENST00000556689 ZEB2O60315 1214 aa15.08■□□□□ 0
SHMT2-223ENST00000556689 ITGA7Q13683 1181 aa15.08■□□□□ 0
SHMT2-223ENST00000556689 LRRC47Q8N1G4 583 aaKnown RBP15.08■□□□□ 0
SHMT2-223ENST00000556689 SEZ6LQ9BYH1 1024 aa15.08■□□□□ 0
SHMT2-223ENST00000556689 NKX2-4Q9H2Z4 354 aa15.08■□□□□ 0
SHMT2-223ENST00000556689 CXXC1Q9P0U4 656 aaPredicted RBP15.08■□□□□ 0
SHMT2-223ENST00000556689 GNEQ9Y223 722 aaKnown RBP15.08■□□□□ 0
SHMT2-223ENST00000556689 SOWAHBA6NEL2 793 aa15.07■□□□□ 0
SHMT2-223ENST00000556689 TMEM232C9JQI7 657 aa15.07■□□□□ 0
SHMT2-223ENST00000556689 GPAA1O43292 621 aa15.07■□□□□ 0
SHMT2-223ENST00000556689 ZFYP08048 801 aaPredicted RBP15.07■□□□□ 0
SHMT2-223ENST00000556689 STAT2P52630 851 aa15.07■□□□□ 0
SHMT2-223ENST00000556689 FSCN1Q16658 493 aaKnown RBP15.07■□□□□ 0
SHMT2-223ENST00000556689 TKFCQ3LXA3 575 aa15.07■□□□□ 0
SHMT2-223ENST00000556689 IQSEC1Q6DN90 963 aa15.07■□□□□ 0
SHMT2-223ENST00000556689 OTOP2Q7RTS6 562 aa15.07■□□□□ 0
SHMT2-223ENST00000556689 TLK2Q86UE8 772 aa15.07■□□□□ 0
SHMT2-223ENST00000556689 FAM160B2Q86V87 743 aa15.07■□□□□ 0
SHMT2-223ENST00000556689 RPUSD2Q8IZ73 545 aaKnown RBP15.07■□□□□ 0
SHMT2-223ENST00000556689 IL27Q8NEV9 243 aa15.07■□□□□ 0
SHMT2-223ENST00000556689 NEDD1Q8NHV4 660 aa15.07■□□□□ 0
SHMT2-223ENST00000556689 STAG1Q8WVM7 1258 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms