RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 ASB14A6NK59 587 aa9.21□□□□□ -0.94
PTCSC3-201ENST00000556013 FOXP2O15409 715 aa9.21□□□□□ -0.94
PTCSC3-201ENST00000556013 PGK1P00558 417 aa9.21□□□□□ -0.94
PTCSC3-201ENST00000556013 CLTBP09497 229 aa9.21□□□□□ -0.94
PTCSC3-201ENST00000556013 TAL1P17542 331 aaPredicted RBP9.21□□□□□ -0.94
PTCSC3-201ENST00000556013 MCCP23508 829 aa9.21□□□□□ -0.94
PTCSC3-201ENST00000556013 MFAP1P55081 439 aaKnown RBP9.21□□□□□ -0.94
PTCSC3-201ENST00000556013 GJA9P57773 515 aa9.21□□□□□ -0.94
PTCSC3-201ENST00000556013 TLE2Q04725 743 aa9.21□□□□□ -0.94
PTCSC3-201ENST00000556013 BTNL9Q6UXG8 535 aa9.21□□□□□ -0.94
PTCSC3-201ENST00000556013 DCAF4Q8WV16 495 aa9.21□□□□□ -0.94
PTCSC3-201ENST00000556013 GLT1D1Q96MS3 346 aa9.21□□□□□ -0.94
PTCSC3-201ENST00000556013 UPF3AQ9H1J1 476 aaKnown RBP9.21□□□□□ -0.94
PTCSC3-201ENST00000556013 RWDD1Q9H446 243 aaPredicted RBP9.21□□□□□ -0.94
PTCSC3-201ENST00000556013 OSBPL3Q9H4L5 887 aa9.21□□□□□ -0.94
PTCSC3-201ENST00000556013 PDLIM7Q9NR12 457 aa9.21□□□□□ -0.94
PTCSC3-201ENST00000556013 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.21□□□□□ -0.94
PTCSC3-201ENST00000556013 STX8Q9UNK0 236 aa9.21□□□□□ -0.94
PTCSC3-201ENST00000556013 ZNF536O15090 1300 aa9.21□□□□□ -0.94
PTCSC3-201ENST00000556013 MROH7Q68CQ1 1323 aa9.21□□□□□ -0.94
PTCSC3-201ENST00000556013 PARP14Q460N5 1801 aa9.21□□□□□ -0.94
PTCSC3-201ENST00000556013 DNAH12Q6ZR08 3092 aa9.2□□□□□ -0.94
PTCSC3-201ENST00000556013 A0A1W2PQ45 241 aaPredicted RBP9.2□□□□□ -0.94
PTCSC3-201ENST00000556013 A0A1W2PQY0 241 aa9.2□□□□□ -0.94
PTCSC3-201ENST00000556013 TRIM43BA6NCK2 446 aa9.2□□□□□ -0.94
PTCSC3-201ENST00000556013 DCDC2CA8MYV0 355 aa9.2□□□□□ -0.94
PTCSC3-201ENST00000556013 RANBP6O60518 1105 aaKnown RBP9.2□□□□□ -0.94
PTCSC3-201ENST00000556013 CABYRO75952 493 aa9.2□□□□□ -0.94
PTCSC3-201ENST00000556013 HSPD1P10809 573 aaKnown RBP9.2□□□□□ -0.94
PTCSC3-201ENST00000556013 TOP1P11387 765 aaKnown RBP9.2□□□□□ -0.94
PTCSC3-201ENST00000556013 CDK7P50613 346 aa9.2□□□□□ -0.94
PTCSC3-201ENST00000556013 ACLYP53396 1101 aa9.2□□□□□ -0.94
PTCSC3-201ENST00000556013 SMAD3P84022 425 aaKnown RBP9.2□□□□□ -0.94
PTCSC3-201ENST00000556013 KCNA10Q16322 511 aa9.2□□□□□ -0.94
PTCSC3-201ENST00000556013 TRIM60Q495X7 471 aa9.2□□□□□ -0.94
PTCSC3-201ENST00000556013 CCDC178Q5BJE1 867 aa9.2□□□□□ -0.94
PTCSC3-201ENST00000556013 IQSEC1Q6DN90 963 aa9.2□□□□□ -0.94
PTCSC3-201ENST00000556013 CCDC129Q6ZRS4 1044 aa9.2□□□□□ -0.94
PTCSC3-201ENST00000556013 ARMCX2Q7L311 632 aa9.2□□□□□ -0.94
PTCSC3-201ENST00000556013 LRRC47Q8N1G4 583 aaKnown RBP9.2□□□□□ -0.94
PTCSC3-201ENST00000556013 SLC17A8Q8NDX2 589 aa9.2□□□□□ -0.94
PTCSC3-201ENST00000556013 FERMT2Q96AC1 680 aa9.2□□□□□ -0.94
PTCSC3-201ENST00000556013 TRIM43Q96BQ3 446 aaPredicted RBP9.2□□□□□ -0.94
PTCSC3-201ENST00000556013 FGD4Q96M96 766 aa9.2□□□□□ -0.94
PTCSC3-201ENST00000556013 TRERF1Q96PN7 1200 aa9.2□□□□□ -0.94
PTCSC3-201ENST00000556013 CRBNQ96SW2 442 aa9.2□□□□□ -0.94
PTCSC3-201ENST00000556013 KATNBL1Q9H079 304 aa9.2□□□□□ -0.94
PTCSC3-201ENST00000556013 RNF41Q9H4P4 317 aaPredicted RBP9.2□□□□□ -0.94
PTCSC3-201ENST00000556013 STARD7Q9NQZ5 370 aa9.2□□□□□ -0.94
PTCSC3-201ENST00000556013 PRR12Q9ULL5 1215 aa9.2□□□□□ -0.94
PTCSC3-201ENST00000556013 TMEM265A0A087WTH1 108 aa9.19□□□□□ -0.94
PTCSC3-201ENST00000556013 MYCNP04198 464 aaPredicted RBP9.19□□□□□ -0.94
PTCSC3-201ENST00000556013 ICAM1P05362 532 aa9.19□□□□□ -0.94
PTCSC3-201ENST00000556013 CTDSPL2Q05D32 466 aa9.19□□□□□ -0.94
PTCSC3-201ENST00000556013 FAAP100Q0VG06 881 aa9.19□□□□□ -0.94
PTCSC3-201ENST00000556013 SHHQ15465 462 aa9.19□□□□□ -0.94
PTCSC3-201ENST00000556013 CCDC144BQ3MJ40 725 aa9.19□□□□□ -0.94
PTCSC3-201ENST00000556013 DGKHQ86XP1 1220 aa9.19□□□□□ -0.94
PTCSC3-201ENST00000556013 CCDC144CPQ8IYA2 1237 aa9.19□□□□□ -0.94
PTCSC3-201ENST00000556013 MORC4Q8TE76 937 aa9.19□□□□□ -0.94
PTCSC3-201ENST00000556013 BADQ92934 168 aa9.19□□□□□ -0.94
PTCSC3-201ENST00000556013 RANBP17Q9H2T7 1088 aaKnown RBP9.19□□□□□ -0.94
PTCSC3-201ENST00000556013 A1CFQ9NQ94 594 aaKnown RBP9.19□□□□□ -0.94
PTCSC3-201ENST00000556013 RNF146Q9NTX7 359 aa9.19□□□□□ -0.94
PTCSC3-201ENST00000556013 TMEM39AQ9NV64 488 aa9.19□□□□□ -0.94
PTCSC3-201ENST00000556013 ZHX1Q9UKY1 873 aaPredicted RBP9.19□□□□□ -0.94
PTCSC3-201ENST00000556013 GNEQ9Y223 722 aaKnown RBP9.19□□□□□ -0.94
PTCSC3-201ENST00000556013 FRMPD3Q5JV73 1810 aa9.19□□□□□ -0.94
PTCSC3-201ENST00000556013 ARVCFO00192 962 aa9.18□□□□□ -0.94
PTCSC3-201ENST00000556013 HIP1O00291 1037 aa9.18□□□□□ -0.94
PTCSC3-201ENST00000556013 ZEB2O60315 1214 aa9.18□□□□□ -0.94
PTCSC3-201ENST00000556013 TIMP1P01033 207 aa9.18□□□□□ -0.94
PTCSC3-201ENST00000556013 ASGR1P07306 291 aa9.18□□□□□ -0.94
PTCSC3-201ENST00000556013 SNHG28P0DPA3 235 aa9.18□□□□□ -0.94
PTCSC3-201ENST00000556013 COL11A1P12107 1806 aaPredicted RBP9.18□□□□□ -0.94
PTCSC3-201ENST00000556013 RAG1P15918 1043 aa9.18□□□□□ -0.94
PTCSC3-201ENST00000556013 SLC4A3P48751 1232 aa9.18□□□□□ -0.94
PTCSC3-201ENST00000556013 IKQ13123 557 aaPredicted RBP9.18□□□□□ -0.94
PTCSC3-201ENST00000556013 GNASQ5JWF2 1037 aa9.18□□□□□ -0.94
PTCSC3-201ENST00000556013 AKNAD1Q5T1N1 836 aa9.18□□□□□ -0.94
PTCSC3-201ENST00000556013 VPS53Q5VIR6 699 aa9.18□□□□□ -0.94
PTCSC3-201ENST00000556013 CCDC174Q6PII3 467 aa9.18□□□□□ -0.94
PTCSC3-201ENST00000556013 MFSD6Q6ZSS7 791 aa9.18□□□□□ -0.94
PTCSC3-201ENST00000556013 KCTD1Q719H9 257 aa9.18□□□□□ -0.94
PTCSC3-201ENST00000556013 SH3RF1Q7Z6J0 888 aa9.18□□□□□ -0.94
PTCSC3-201ENST00000556013 SLC43A3Q8NBI5 491 aa9.18□□□□□ -0.94
PTCSC3-201ENST00000556013 RGS22Q8NE09 1264 aa9.18□□□□□ -0.94
PTCSC3-201ENST00000556013 ANKS1AQ92625 1134 aa9.18□□□□□ -0.94
PTCSC3-201ENST00000556013 AGBL1Q96MI9 1066 aa9.18□□□□□ -0.94
PTCSC3-201ENST00000556013 PRDM5Q9NQX1 630 aaPredicted RBP9.18□□□□□ -0.94
PTCSC3-201ENST00000556013 ADD3Q9UEY8 706 aaKnown RBP9.18□□□□□ -0.94
PTCSC3-201ENST00000556013 SYNRGQ9UMZ2 1314 aa9.18□□□□□ -0.94
PTCSC3-201ENST00000556013 CCDC171Q6TFL3 1326 aa9.17□□□□□ -0.94
PTCSC3-201ENST00000556013 A0A0U1RQG5 324 aaPredicted RBP9.17□□□□□ -0.94
PTCSC3-201ENST00000556013 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.17□□□□□ -0.94
PTCSC3-201ENST00000556013 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.17□□□□□ -0.94
PTCSC3-201ENST00000556013 SOWAHBA6NEL2 793 aa9.17□□□□□ -0.94
PTCSC3-201ENST00000556013 B4DLN1 442 aa9.17□□□□□ -0.94
PTCSC3-201ENST00000556013 TLR3O15455 904 aaKnown RBP9.17□□□□□ -0.94
PTCSC3-201ENST00000556013 C6orf222P0C671 652 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms