RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 PRDM1O75626 825 aa20.16■□□□□ 0.82
XRCC3-215ENST00000555964 TIMP1P01033 207 aa20.16■□□□□ 0.82
XRCC3-215ENST00000555964 ITGB8P26012 769 aa20.16■□□□□ 0.82
XRCC3-215ENST00000555964 STAT2P52630 851 aa20.16■□□□□ 0.82
XRCC3-215ENST00000555964 FAAP100Q0VG06 881 aa20.16■□□□□ 0.82
XRCC3-215ENST00000555964 PPIGQ13427 754 aaKnown RBP eCLIP20.16■□□□□ 0.822e-9■□□□□ 9.2
XRCC3-215ENST00000555964 SLFN13Q68D06 897 aa20.16■□□□□ 0.82
XRCC3-215ENST00000555964 ARMCX2Q7L311 632 aa20.16■□□□□ 0.82
XRCC3-215ENST00000555964 FAM160B2Q86V87 743 aa20.16■□□□□ 0.82
XRCC3-215ENST00000555964 LRRC47Q8N1G4 583 aaKnown RBP20.16■□□□□ 0.82
XRCC3-215ENST00000555964 CHURC1Q8WUH1 139 aa20.16■□□□□ 0.82
XRCC3-215ENST00000555964 UPF3AQ9H1J1 476 aaKnown RBP20.16■□□□□ 0.82
XRCC3-215ENST00000555964 ACAD9Q9H845 621 aa20.16■□□□□ 0.82
XRCC3-215ENST00000555964 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.15■□□□□ 0.82
XRCC3-215ENST00000555964 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.15■□□□□ 0.82
XRCC3-215ENST00000555964 TLR3O15455 904 aaKnown RBP20.15■□□□□ 0.82
XRCC3-215ENST00000555964 TKFCQ3LXA3 575 aa20.15■□□□□ 0.82
XRCC3-215ENST00000555964 CCSAPQ6IQ19 270 aaPredicted RBP20.15■□□□□ 0.82
XRCC3-215ENST00000555964 IFNL3Q8IZI9 196 aa20.15■□□□□ 0.82
XRCC3-215ENST00000555964 NEDD1Q8NHV4 660 aa20.15■□□□□ 0.82
XRCC3-215ENST00000555964 VTI1AQ96AJ9 217 aa20.15■□□□□ 0.82
XRCC3-215ENST00000555964 NAPBQ9H115 298 aa20.15■□□□□ 0.82
XRCC3-215ENST00000555964 TTYH1Q9H313 450 aaPredicted RBP20.15■□□□□ 0.82
XRCC3-215ENST00000555964 TBX21Q9UL17 535 aa20.15■□□□□ 0.82
XRCC3-215ENST00000555964 UNC80Q8N2C7 3258 aa20.15■□□□□ 0.82
XRCC3-215ENST00000555964 M0R2C6 588 aa20.14■□□□□ 0.81
XRCC3-215ENST00000555964 ASGR1P07306 291 aa20.14■□□□□ 0.81
XRCC3-215ENST00000555964 GJA9P57773 515 aa20.14■□□□□ 0.81
XRCC3-215ENST00000555964 IKQ13123 557 aaPredicted RBP20.14■□□□□ 0.81
XRCC3-215ENST00000555964 CCDC144BQ3MJ40 725 aa20.14■□□□□ 0.81
XRCC3-215ENST00000555964 C20orf194Q5TEA3 1177 aa20.14■□□□□ 0.81
XRCC3-215ENST00000555964 MYLIPQ8WY64 445 aa20.14■□□□□ 0.81
XRCC3-215ENST00000555964 LAMA2P24043 3122 aaKnown RBP20.14■□□□□ 0.81
XRCC3-215ENST00000555964 ASB14A6NK59 587 aa20.13■□□□□ 0.81
XRCC3-215ENST00000555964 SLC1A4P43007 532 aa20.13■□□□□ 0.81
XRCC3-215ENST00000555964 EPHB4P54760 987 aa20.13■□□□□ 0.81
XRCC3-215ENST00000555964 GNASQ5JWF2 1037 aa20.13■□□□□ 0.81
XRCC3-215ENST00000555964 TSHZ3Q63HK5 1081 aa20.13■□□□□ 0.81
XRCC3-215ENST00000555964 MFSD5Q6N075 450 aa20.13■□□□□ 0.81
XRCC3-215ENST00000555964 CCDC129Q6ZRS4 1044 aa20.13■□□□□ 0.81
XRCC3-215ENST00000555964 TMEM199Q8N511 208 aa20.13■□□□□ 0.81
XRCC3-215ENST00000555964 GMCL1Q96IK5 515 aa20.13■□□□□ 0.81
XRCC3-215ENST00000555964 FSD1Q9BTV5 496 aa20.13■□□□□ 0.81
XRCC3-215ENST00000555964 MYADML2A6NDP7 307 aa20.12■□□□□ 0.81
XRCC3-215ENST00000555964 TMEM232C9JQI7 657 aa20.12■□□□□ 0.81
XRCC3-215ENST00000555964 ARVCFO00192 962 aa20.12■□□□□ 0.81
XRCC3-215ENST00000555964 DNAJB2P25686 324 aa20.12■□□□□ 0.81
XRCC3-215ENST00000555964 PSRC1Q6PGN9 363 aaPredicted RBP20.12■□□□□ 0.81
XRCC3-215ENST00000555964 CCDC144CPQ8IYA2 1237 aa20.12■□□□□ 0.81
XRCC3-215ENST00000555964 STAG1Q8WVM7 1258 aa20.12■□□□□ 0.81
XRCC3-215ENST00000555964 SYMPKQ92797 1274 aaKnown RBP20.12■□□□□ 0.81
XRCC3-215ENST00000555964 SEZ6LQ9BYH1 1024 aa20.12■□□□□ 0.81
XRCC3-215ENST00000555964 HOMER2Q9NSB8 354 aa20.12■□□□□ 0.81
XRCC3-215ENST00000555964 ZEB2O60315 1214 aa20.11■□□□□ 0.81
XRCC3-215ENST00000555964 PLA2G6O60733 806 aa20.11■□□□□ 0.81
XRCC3-215ENST00000555964 CABYRO75952 493 aa20.11■□□□□ 0.81
XRCC3-215ENST00000555964 CDK7P50613 346 aa20.11■□□□□ 0.81
XRCC3-215ENST00000555964 TFAP4Q01664 338 aa20.11■□□□□ 0.81
XRCC3-215ENST00000555964 PPARAQ07869 468 aa20.11■□□□□ 0.81
XRCC3-215ENST00000555964 NOL8Q76FK4 1167 aaKnown RBP20.11■□□□□ 0.81
XRCC3-215ENST00000555964 MTIF3Q9H2K0 278 aaKnown RBP20.11■□□□□ 0.81
XRCC3-215ENST00000555964 RNF146Q9NTX7 359 aa20.11■□□□□ 0.81
XRCC3-215ENST00000555964 NKX3-2P78367 333 aa20.1■□□□□ 0.81
XRCC3-215ENST00000555964 TNFAIP2Q03169 654 aa20.1■□□□□ 0.81
XRCC3-215ENST00000555964 FAM133AQ8N9E0 248 aa20.1■□□□□ 0.81
XRCC3-215ENST00000555964 TIFAQ96CG3 184 aa20.1■□□□□ 0.81
XRCC3-215ENST00000555964 FGD4Q96M96 766 aa20.1■□□□□ 0.81
XRCC3-215ENST00000555964 ZBTB47Q9UFB7 747 aaPredicted RBP20.1■□□□□ 0.81
XRCC3-215ENST00000555964 CDH23Q9H251 3354 aa20.09■□□□□ 0.81
XRCC3-215ENST00000555964 TSPY2A6NKD2 308 aa20.09■□□□□ 0.81
XRCC3-215ENST00000555964 FAM126BQ8IXS8 530 aa20.09■□□□□ 0.81
XRCC3-215ENST00000555964 AP5M1Q9H0R1 490 aa20.09■□□□□ 0.81
XRCC3-215ENST00000555964 STX8Q9UNK0 236 aa20.09■□□□□ 0.81
XRCC3-215ENST00000555964 LRRC37A2A6NM11 1700 aa20.09■□□□□ 0.81
XRCC3-215ENST00000555964 ZMYM1Q5SVZ6 1142 aa20.08■□□□□ 0.81
XRCC3-215ENST00000555964 TRERF1Q96PN7 1200 aa20.08■□□□□ 0.81
XRCC3-215ENST00000555964 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.08■□□□□ 0.817e-7■■■■■ 30.2
XRCC3-215ENST00000555964 KATNBL1Q9H079 304 aa20.08■□□□□ 0.81
XRCC3-215ENST00000555964 ZNF576Q9H609 170 aa20.08■□□□□ 0.81
XRCC3-215ENST00000555964 A1CFQ9NQ94 594 aaKnown RBP20.08■□□□□ 0.81
XRCC3-215ENST00000555964 ADCY6O43306 1168 aa20.07■□□□□ 0.8
XRCC3-215ENST00000555964 ALAS1P13196 640 aa20.07■□□□□ 0.8
XRCC3-215ENST00000555964 CNTN2Q02246 1040 aa20.07■□□□□ 0.8
XRCC3-215ENST00000555964 TLK2Q86UE8 772 aa20.07■□□□□ 0.8
XRCC3-215ENST00000555964 PI4K2BQ8TCG2 481 aa20.07■□□□□ 0.8
XRCC3-215ENST00000555964 GAS2L1Q99501 681 aaPredicted RBP20.07■□□□□ 0.8
XRCC3-215ENST00000555964 ZNF536O15090 1300 aa20.06■□□□□ 0.8
XRCC3-215ENST00000555964 MX1P20591 662 aa20.06■□□□□ 0.8
XRCC3-215ENST00000555964 MCCP23508 829 aa20.06■□□□□ 0.8
XRCC3-215ENST00000555964 FSCN1Q16658 493 aaKnown RBP20.06■□□□□ 0.8
XRCC3-215ENST00000555964 TMEM240Q5SV17 173 aa20.06■□□□□ 0.8
XRCC3-215ENST00000555964 RCSD1Q6JBY9 416 aa20.06■□□□□ 0.8
XRCC3-215ENST00000555964 AGBL1Q96MI9 1066 aa20.06■□□□□ 0.8
XRCC3-215ENST00000555964 SEC62Q99442 399 aaKnown RBP20.06■□□□□ 0.8
XRCC3-215ENST00000555964 Q9Y3F1 56 aa20.06■□□□□ 0.8
XRCC3-215ENST00000555964 TTC28Q96AY4 2481 aa20.05■□□□□ 0.8
XRCC3-215ENST00000555964 CSF2RAP15509 400 aa20.05■□□□□ 0.8
XRCC3-215ENST00000555964 GRIN2CQ14957 1233 aa20.05■□□□□ 0.8
XRCC3-215ENST00000555964 RAB30Q15771 203 aa20.05■□□□□ 0.8
XRCC3-215ENST00000555964 IQSEC1Q6DN90 963 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms