RNA–Protein interactions for RNA: ENST00000555855.5

FOXN3-211, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-211ENST00000555855 TBX21Q9UL17 535 aa23.16■■□□□ 1.3
FOXN3-211ENST00000555855 SYNPO2Q9UMS6 1093 aa23.16■■□□□ 1.3
FOXN3-211ENST00000555855 MYADML2A6NDP7 307 aa23.15■■□□□ 1.3
FOXN3-211ENST00000555855 TTLL1O95922 423 aa23.15■■□□□ 1.3
FOXN3-211ENST00000555855 ZFYP08048 801 aaPredicted RBP23.15■■□□□ 1.3
FOXN3-211ENST00000555855 LRRFIP1Q32MZ4 808 aaKnown RBP23.15■■□□□ 1.3
FOXN3-211ENST00000555855 ARMCX2Q7L311 632 aa23.15■■□□□ 1.3
FOXN3-211ENST00000555855 MTMR4Q9NYA4 1195 aa23.15■■□□□ 1.3
FOXN3-211ENST00000555855 IGKV6D-41A0A0C4DH26 115 aa23.14■■□□□ 1.29
FOXN3-211ENST00000555855 PATL2C9JE40 543 aaKnown RBP23.14■■□□□ 1.29
FOXN3-211ENST00000555855 PRDM1O75626 825 aa23.14■■□□□ 1.29
FOXN3-211ENST00000555855 BMP3P12645 472 aa23.14■■□□□ 1.29
FOXN3-211ENST00000555855 SLFN13Q68D06 897 aa23.14■■□□□ 1.29
FOXN3-211ENST00000555855 NOL8Q76FK4 1167 aaKnown RBP23.14■■□□□ 1.29
FOXN3-211ENST00000555855 CEP95Q96GE4 821 aa23.14■■□□□ 1.29
FOXN3-211ENST00000555855 UPF3AQ9H1J1 476 aaKnown RBP23.14■■□□□ 1.29
FOXN3-211ENST00000555855 ISY1Q9ULR0 285 aaKnown RBP23.14■■□□□ 1.29
FOXN3-211ENST00000555855 GPAA1O43292 621 aa23.13■■□□□ 1.29
FOXN3-211ENST00000555855 IRX5P78411 483 aaPredicted RBP23.13■■□□□ 1.29
FOXN3-211ENST00000555855 TMEM240Q5SV17 173 aa23.13■■□□□ 1.29
FOXN3-211ENST00000555855 CCDC144CPQ8IYA2 1237 aa23.13■■□□□ 1.29
FOXN3-211ENST00000555855 GMCL1P1Q8NEA9 526 aa23.13■■□□□ 1.29
FOXN3-211ENST00000555855 CHURC1Q8WUH1 139 aa23.13■■□□□ 1.29
FOXN3-211ENST00000555855 GAS2L1Q99501 681 aaPredicted RBP23.13■■□□□ 1.29
FOXN3-211ENST00000555855 NACAP1Q9BZK3 213 aa23.13■■□□□ 1.29
FOXN3-211ENST00000555855 MYO9BQ13459 2157 aa23.13■■□□□ 1.29
FOXN3-211ENST00000555855 GREB1LQ9C091 1923 aaPredicted RBP23.12■■□□□ 1.29
FOXN3-211ENST00000555855 SLC3A2P08195 630 aaKnown RBP23.12■■□□□ 1.29
FOXN3-211ENST00000555855 TSPY3P0CV98 308 aa23.12■■□□□ 1.29
FOXN3-211ENST00000555855 TSPY8P0CW00 308 aa23.12■■□□□ 1.29
FOXN3-211ENST00000555855 PDE4BQ07343 736 aa23.12■■□□□ 1.29
FOXN3-211ENST00000555855 IFNL3Q8IZI9 196 aa23.12■■□□□ 1.29
FOXN3-211ENST00000555855 LRRC47Q8N1G4 583 aaKnown RBP23.12■■□□□ 1.29
FOXN3-211ENST00000555855 HOMER2Q9NSB8 354 aa23.12■■□□□ 1.29
FOXN3-211ENST00000555855 MYH4Q9Y623 1939 aa23.12■■□□□ 1.29
FOXN3-211ENST00000555855 TMEM232C9JQI7 657 aa23.11■■□□□ 1.29
FOXN3-211ENST00000555855 CSF2RAP15509 400 aa23.11■■□□□ 1.29
FOXN3-211ENST00000555855 TNFAIP2Q03169 654 aa23.11■■□□□ 1.29
FOXN3-211ENST00000555855 IKQ13123 557 aaPredicted RBP23.11■■□□□ 1.29
FOXN3-211ENST00000555855 PSRC1Q6PGN9 363 aaPredicted RBP23.11■■□□□ 1.29
FOXN3-211ENST00000555855 C16orf59Q7L2K0 433 aa23.11■■□□□ 1.29
FOXN3-211ENST00000555855 NEDD1Q8NHV4 660 aa23.11■■□□□ 1.29
FOXN3-211ENST00000555855 PPP1R12CQ9BZL4 782 aa23.11■■□□□ 1.29
FOXN3-211ENST00000555855 ACAD9Q9H845 621 aa23.11■■□□□ 1.29
FOXN3-211ENST00000555855 PRDM6Q9NQX0 595 aa23.11■■□□□ 1.29
FOXN3-211ENST00000555855 RCAN3Q9UKA8 241 aa23.11■■□□□ 1.29
FOXN3-211ENST00000555855 ASB14A6NK59 587 aa23.1■■□□□ 1.29
FOXN3-211ENST00000555855 ADCY6O43306 1168 aa23.1■■□□□ 1.29
FOXN3-211ENST00000555855 CNTN2Q02246 1040 aa23.1■■□□□ 1.29
FOXN3-211ENST00000555855 TJAP1Q5JTD0 557 aa23.1■■□□□ 1.29
FOXN3-211ENST00000555855 ZNF365Q70YC5 407 aa23.1■■□□□ 1.29
FOXN3-211ENST00000555855 FAM160B2Q86V87 743 aa23.1■■□□□ 1.29
FOXN3-211ENST00000555855 FGD4Q96M96 766 aa23.1■■□□□ 1.29
FOXN3-211ENST00000555855 EPB41L4AQ9HCS5 686 aaPredicted RBP23.1■■□□□ 1.29
FOXN3-211ENST00000555855 MCM3APO60318 1980 aa23.1■■□□□ 1.29
FOXN3-211ENST00000555855 ZEB2O60315 1214 aa23.09■■□□□ 1.29
FOXN3-211ENST00000555855 CABYRO75952 493 aa23.09■■□□□ 1.29
FOXN3-211ENST00000555855 ACRP10323 421 aa23.09■■□□□ 1.29
FOXN3-211ENST00000555855 STAT2P52630 851 aa23.09■■□□□ 1.29
FOXN3-211ENST00000555855 TFAP4Q01664 338 aa23.09■■□□□ 1.29
FOXN3-211ENST00000555855 TKFCQ3LXA3 575 aa23.09■■□□□ 1.29
FOXN3-211ENST00000555855 PPP4R3BQ5MIZ7 849 aa23.09■■□□□ 1.29
FOXN3-211ENST00000555855 FAM126BQ8IXS8 530 aa23.09■■□□□ 1.29
FOXN3-211ENST00000555855 STAG1Q8WVM7 1258 aa23.09■■□□□ 1.29
FOXN3-211ENST00000555855 PBX4Q9BYU1 374 aa23.09■■□□□ 1.29
FOXN3-211ENST00000555855 AP5M1Q9H0R1 490 aa23.09■■□□□ 1.29
FOXN3-211ENST00000555855 MTIF3Q9H2K0 278 aaKnown RBP23.09■■□□□ 1.29
FOXN3-211ENST00000555855 MSRAQ9UJ68 235 aa23.09■■□□□ 1.29
FOXN3-211ENST00000555855 GRXCR1A8MXD5 290 aa23.08■■□□□ 1.29
FOXN3-211ENST00000555855 M0R2C6 588 aa23.08■■□□□ 1.29
FOXN3-211ENST00000555855 NKX3-2P78367 333 aa23.08■■□□□ 1.29
FOXN3-211ENST00000555855 BEX3Q00994 111 aa23.08■■□□□ 1.29
FOXN3-211ENST00000555855 RASIP1Q5U651 963 aa23.08■■□□□ 1.29
FOXN3-211ENST00000555855 DIEXFQ68CQ4 756 aaKnown RBP23.08■■□□□ 1.29
FOXN3-211ENST00000555855 FAM133AQ8N9E0 248 aa23.08■■□□□ 1.29
FOXN3-211ENST00000555855 PPM1EQ8WY54 764 aa23.08■■□□□ 1.29
FOXN3-211ENST00000555855 DCTPP1Q9H773 170 aa23.08■■□□□ 1.29
FOXN3-211ENST00000555855 IL23AQ9NPF7 189 aa23.08■■□□□ 1.29
FOXN3-211ENST00000555855 FGBP02675 491 aa23.07■■□□□ 1.28
FOXN3-211ENST00000555855 PBX2P40425 430 aa23.07■■□□□ 1.28
FOXN3-211ENST00000555855 SLC1A4P43007 532 aa23.07■■□□□ 1.28
FOXN3-211ENST00000555855 AGBL1Q96MI9 1066 aa23.07■■□□□ 1.28
FOXN3-211ENST00000555855 TRERF1Q96PN7 1200 aa23.07■■□□□ 1.28
FOXN3-211ENST00000555855 SEZ6LQ9BYH1 1024 aa23.07■■□□□ 1.28
FOXN3-211ENST00000555855 KATNBL1Q9H079 304 aa23.07■■□□□ 1.28
FOXN3-211ENST00000555855 NAPBQ9H115 298 aa23.07■■□□□ 1.28
FOXN3-211ENST00000555855 RNF146Q9NTX7 359 aa23.07■■□□□ 1.28
FOXN3-211ENST00000555855 CD4P01730 458 aa23.06■■□□□ 1.28
FOXN3-211ENST00000555855 ALAS1P13196 640 aa23.06■■□□□ 1.28
FOXN3-211ENST00000555855 MCCP23508 829 aa23.06■■□□□ 1.28
FOXN3-211ENST00000555855 CYP2C18P33260 490 aa23.06■■□□□ 1.28
FOXN3-211ENST00000555855 RAB30Q15771 203 aa23.06■■□□□ 1.28
FOXN3-211ENST00000555855 TSHZ3Q63HK5 1081 aa23.06■■□□□ 1.28
FOXN3-211ENST00000555855 CXCL17Q6UXB2 119 aa23.06■■□□□ 1.28
FOXN3-211ENST00000555855 USP38Q8NB14 1042 aa23.06■■□□□ 1.28
FOXN3-211ENST00000555855 GMCL1Q96IK5 515 aa23.06■■□□□ 1.28
FOXN3-211ENST00000555855 A1CFQ9NQ94 594 aaKnown RBP23.06■■□□□ 1.28
FOXN3-211ENST00000555855 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.05■■□□□ 1.28
FOXN3-211ENST00000555855 SOWAHBA6NEL2 793 aa23.05■■□□□ 1.28
FOXN3-211ENST00000555855 CTAGE5O15320 804 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms