RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 PRR13Q9NZ81 148 aa8.7□□□□□ -1.02
VRK1-203ENST00000555067 TMEM82A0PJX8 343 aa8.69□□□□□ -1.02
VRK1-203ENST00000555067 ABLIM1O14639 778 aa8.69□□□□□ -1.02
VRK1-203ENST00000555067 IMPDH2P12268 514 aa8.69□□□□□ -1.02
VRK1-203ENST00000555067 SLC14A2Q15849 920 aa8.69□□□□□ -1.02
VRK1-203ENST00000555067 LDLRAD1Q5T700 205 aa8.69□□□□□ -1.02
VRK1-203ENST00000555067 FRMD5Q7Z6J6 570 aa8.69□□□□□ -1.02
VRK1-203ENST00000555067 IGDCC3Q8IVU1 814 aa8.69□□□□□ -1.02
VRK1-203ENST00000555067 TMEM192Q8IY95 271 aa8.69□□□□□ -1.02
VRK1-203ENST00000555067 TP53I13Q8NBR0 393 aaPredicted RBP8.69□□□□□ -1.02
VRK1-203ENST00000555067 HHIPL1Q96JK4 782 aa8.69□□□□□ -1.02
VRK1-203ENST00000555067 FCRL2Q96LA5 508 aaPredicted RBP8.69□□□□□ -1.02
VRK1-203ENST00000555067 ANTXR1Q9H6X2 564 aa8.69□□□□□ -1.02
VRK1-203ENST00000555067 CHST7Q9NS84 486 aa8.69□□□□□ -1.02
VRK1-203ENST00000555067 ZNRF3Q9ULT6 936 aa8.69□□□□□ -1.02
VRK1-203ENST00000555067 PCDHB12Q9Y5F1 795 aa8.69□□□□□ -1.02
VRK1-203ENST00000555067 SDHBP21912 280 aa8.68□□□□□ -1.02
VRK1-203ENST00000555067 OLFML2BQ68BL8 750 aa8.68□□□□□ -1.02
VRK1-203ENST00000555067 CEP128Q6ZU80 1094 aa8.68□□□□□ -1.02
VRK1-203ENST00000555067 PLCD4Q9BRC7 762 aa8.68□□□□□ -1.02
VRK1-203ENST00000555067 KLHL14Q9P2G3 628 aa8.68□□□□□ -1.02
VRK1-203ENST00000555067 FKTNO75072 461 aa8.67□□□□□ -1.02
VRK1-203ENST00000555067 INTS3Q68E01 1043 aaKnown RBP8.67□□□□□ -1.02
VRK1-203ENST00000555067 USP48Q86UV5 1035 aa8.67□□□□□ -1.02
VRK1-203ENST00000555067 DHRS1Q96LJ7 313 aa8.67□□□□□ -1.02
VRK1-203ENST00000555067 BMP8BP34820 402 aa8.66□□□□□ -1.02
VRK1-203ENST00000555067 LDHDQ86WU2 507 aa8.66□□□□□ -1.02
VRK1-203ENST00000555067 SLC9A7Q96T83 725 aa8.66□□□□□ -1.02
VRK1-203ENST00000555067 GFOD1Q9NXC2 390 aa8.66□□□□□ -1.02
VRK1-203ENST00000555067 TNFRSF10DQ9UBN6 386 aa8.66□□□□□ -1.02
VRK1-203ENST00000555067 SUCOQ9UBS9 1254 aaKnown RBP8.66□□□□□ -1.02
VRK1-203ENST00000555067 FBXL21Q9UKT6 434 aa8.66□□□□□ -1.02
VRK1-203ENST00000555067 FANCCQ00597 558 aa8.65□□□□□ -1.02
VRK1-203ENST00000555067 CAP1Q01518 475 aa8.65□□□□□ -1.02
VRK1-203ENST00000555067 AUHQ13825 339 aaKnown RBP8.65□□□□□ -1.02
VRK1-203ENST00000555067 TAB3Q8N5C8 712 aaPredicted RBP8.65□□□□□ -1.02
VRK1-203ENST00000555067 BACH2Q9BYV9 841 aa8.65□□□□□ -1.02
VRK1-203ENST00000555067 PCDHA5Q9Y5H7 936 aa8.65□□□□□ -1.02
VRK1-203ENST00000555067 RTP1P59025 263 aa8.64□□□□□ -1.03
VRK1-203ENST00000555067 ZPBP2Q6X784 338 aa8.64□□□□□ -1.03
VRK1-203ENST00000555067 SMARCC1Q92922 1105 aaPredicted RBP8.64□□□□□ -1.03
VRK1-203ENST00000555067 FERD3LQ96RJ6 166 aa8.64□□□□□ -1.03
VRK1-203ENST00000555067 MINPP1Q9UNW1 487 aa8.64□□□□□ -1.03
VRK1-203ENST00000555067 FADS2P1A8MWK0 482 aa8.63□□□□□ -1.03
VRK1-203ENST00000555067 ZNF205O95201 554 aa8.63□□□□□ -1.03
VRK1-203ENST00000555067 PLP2Q04941 152 aa8.63□□□□□ -1.03
VRK1-203ENST00000555067 GALNT18Q6P9A2 607 aa8.63□□□□□ -1.03
VRK1-203ENST00000555067 PWWP2AQ96N64 755 aa8.63□□□□□ -1.03
VRK1-203ENST00000555067 TM9SF2Q99805 663 aa8.63□□□□□ -1.03
VRK1-203ENST00000555067 TAF6LQ9Y6J9 622 aa8.63□□□□□ -1.03
VRK1-203ENST00000555067 MEIS1O00470 390 aa8.62□□□□□ -1.03
VRK1-203ENST00000555067 MPOP05164 745 aa8.62□□□□□ -1.03
VRK1-203ENST00000555067 GSNP06396 782 aa8.62□□□□□ -1.03
VRK1-203ENST00000555067 ACRP10323 421 aa8.62□□□□□ -1.03
VRK1-203ENST00000555067 CTSKP43235 329 aa8.62□□□□□ -1.03
VRK1-203ENST00000555067 PMS1P54277 932 aaKnown RBP8.62□□□□□ -1.03
VRK1-203ENST00000555067 CCDC144CPQ8IYA2 1237 aa8.62□□□□□ -1.03
VRK1-203ENST00000555067 C7orf61Q8IZ16 206 aa8.62□□□□□ -1.03
VRK1-203ENST00000555067 RNF34Q969K3 372 aa8.62□□□□□ -1.03
VRK1-203ENST00000555067 BDH2Q9BUT1 245 aa8.62□□□□□ -1.03
VRK1-203ENST00000555067 DSCC1Q9BVC3 393 aa8.62□□□□□ -1.03
VRK1-203ENST00000555067 ERVK13-1Q9NX77 482 aa8.62□□□□□ -1.03
VRK1-203ENST00000555067 MYRFQ9Y2G1 1151 aa8.62□□□□□ -1.03
VRK1-203ENST00000555067 GPR55Q9Y2T6 319 aaPredicted RBP8.62□□□□□ -1.03
VRK1-203ENST00000555067 WTIPA6NIX2 430 aaPredicted RBP8.61□□□□□ -1.03
VRK1-203ENST00000555067 PRICKLE3O43900 615 aaPredicted RBP8.61□□□□□ -1.03
VRK1-203ENST00000555067 KIR3DS1Q14943 382 aa8.61□□□□□ -1.03
VRK1-203ENST00000555067 RTP5Q14D33 572 aa8.61□□□□□ -1.03
VRK1-203ENST00000555067 HSF5Q4G112 596 aaPredicted RBP8.61□□□□□ -1.03
VRK1-203ENST00000555067 ZNF394Q53GI3 561 aa8.61□□□□□ -1.03
VRK1-203ENST00000555067 ZFYVE27Q5T4F4 411 aa8.61□□□□□ -1.03
VRK1-203ENST00000555067 CRTC3Q6UUV7 619 aa8.61□□□□□ -1.03
VRK1-203ENST00000555067 TMC6Q7Z403 805 aa8.61□□□□□ -1.03
VRK1-203ENST00000555067 CDADC1Q9BWV3 514 aa8.61□□□□□ -1.03
VRK1-203ENST00000555067 KRTAP9-8Q9BYQ0 159 aa8.61□□□□□ -1.03
VRK1-203ENST00000555067 CNOT11Q9UKZ1 510 aaKnown RBP8.61□□□□□ -1.03
VRK1-203ENST00000555067 PCDHGB7Q9Y5F8 929 aa8.61□□□□□ -1.03
VRK1-203ENST00000555067 FFAR3O14843 346 aa8.6□□□□□ -1.03
VRK1-203ENST00000555067 VAV1P15498 845 aa8.6□□□□□ -1.03
VRK1-203ENST00000555067 ARL4AP40617 200 aa8.6□□□□□ -1.03
VRK1-203ENST00000555067 MFAP1P55081 439 aaKnown RBP8.6□□□□□ -1.03
VRK1-203ENST00000555067 RBBP8NLQ8NC74 664 aaPredicted RBP8.6□□□□□ -1.03
VRK1-203ENST00000555067 IRS2Q9Y4H2 1338 aa8.59□□□□□ -1.03
VRK1-203ENST00000555067 A0A1W2PQ45 241 aaPredicted RBP8.59□□□□□ -1.03
VRK1-203ENST00000555067 A0A1W2PQY0 241 aa8.59□□□□□ -1.03
VRK1-203ENST00000555067 FAM86C2PA6NEL3 165 aa8.59□□□□□ -1.03
VRK1-203ENST00000555067 C9IYK1 514 aa8.59□□□□□ -1.03
VRK1-203ENST00000555067 SHOXO15266 292 aa8.59□□□□□ -1.03
VRK1-203ENST00000555067 INSRRP14616 1297 aa8.59□□□□□ -1.03
VRK1-203ENST00000555067 CEBPAP49715 358 aaPredicted RBP8.59□□□□□ -1.03
VRK1-203ENST00000555067 TMEM62Q0P6H9 643 aa8.59□□□□□ -1.03
VRK1-203ENST00000555067 LAPTM5Q13571 262 aa8.59□□□□□ -1.03
VRK1-203ENST00000555067 CBX2Q14781 532 aaPredicted RBP8.59□□□□□ -1.03
VRK1-203ENST00000555067 HHIPL2Q6UWX4 724 aa8.59□□□□□ -1.03
VRK1-203ENST00000555067 SLCO6A1Q86UG4 719 aa8.59□□□□□ -1.03
VRK1-203ENST00000555067 TNFRSF12AQ9NP84 129 aa8.59□□□□□ -1.03
VRK1-203ENST00000555067 BUB1BO60566 1050 aaPredicted RBP8.58□□□□□ -1.04
VRK1-203ENST00000555067 IGFBP6P24592 240 aaPredicted RBP8.58□□□□□ -1.04
VRK1-203ENST00000555067 GUCY2CP25092 1073 aa8.58□□□□□ -1.04
VRK1-203ENST00000555067 COL9A2Q14055 689 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms