RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 TMEM139Q8IV31 216 aa24.01■■□□□ 1.43
ARHGEF40-204ENST00000555038 ZNF592Q92610 1267 aa24.01■■□□□ 1.43
ARHGEF40-204ENST00000555038 ADD3Q9UEY8 706 aaKnown RBP24.01■■□□□ 1.43
ARHGEF40-204ENST00000555038 USP17L5A8MUK1 530 aa24.01■■□□□ 1.43
ARHGEF40-204ENST00000555038 PAK1Q13153 545 aa24.01■■□□□ 1.43
ARHGEF40-204ENST00000555038 KARSQ15046 597 aaKnown RBP24.01■■□□□ 1.43
ARHGEF40-204ENST00000555038 REXO1Q8N1G1 1221 aaKnown RBP24.01■■□□□ 1.43
ARHGEF40-204ENST00000555038 ZNF710Q8N1W2 664 aa24.01■■□□□ 1.43
ARHGEF40-204ENST00000555038 PIGSQ96S52 555 aa24.01■■□□□ 1.43
ARHGEF40-204ENST00000555038 BAG1Q99933 345 aaPredicted RBP24.01■■□□□ 1.43
ARHGEF40-204ENST00000555038 BLZF1Q9H2G9 400 aa24.01■■□□□ 1.43
ARHGEF40-204ENST00000555038 G3V3G9 751 aa24■■□□□ 1.43
ARHGEF40-204ENST00000555038 DCAF8Q5TAQ9 597 aa24■■□□□ 1.43
ARHGEF40-204ENST00000555038 HOMER1Q86YM7 354 aa24■■□□□ 1.43
ARHGEF40-204ENST00000555038 TC2NQ8N9U0 490 aa24■■□□□ 1.43
ARHGEF40-204ENST00000555038 ANKRD20A12PQ8NF67 263 aa24■■□□□ 1.43
ARHGEF40-204ENST00000555038 KBTBD4Q9NVX7 518 aa24■■□□□ 1.43
ARHGEF40-204ENST00000555038 LIMA1Q9UHB6 759 aaKnown RBP24■■□□□ 1.43
ARHGEF40-204ENST00000555038 ITIH6Q6UXX5 1313 aa24■■□□□ 1.43
ARHGEF40-204ENST00000555038 LRRC10BA6NIK2 292 aa23.99■■□□□ 1.43
ARHGEF40-204ENST00000555038 AKR1B1P15121 316 aa23.99■■□□□ 1.43
ARHGEF40-204ENST00000555038 PBX1P40424 430 aa23.99■■□□□ 1.43
ARHGEF40-204ENST00000555038 NAALADL2Q58DX5 795 aa23.99■■□□□ 1.43
ARHGEF40-204ENST00000555038 HSP90AA4PQ58FG1 418 aa23.99■■□□□ 1.43
ARHGEF40-204ENST00000555038 RASSF8Q8NHQ8 419 aa23.99■■□□□ 1.43
ARHGEF40-204ENST00000555038 CCDC17Q96LX7 622 aa23.99■■□□□ 1.43
ARHGEF40-204ENST00000555038 PANX2Q96RD6 677 aa23.99■■□□□ 1.43
ARHGEF40-204ENST00000555038 DDX4Q9NQI0 724 aaKnown RBP23.99■■□□□ 1.43
ARHGEF40-204ENST00000555038 CTNND2Q9UQB3 1225 aa23.99■■□□□ 1.43
ARHGEF40-204ENST00000555038 GREB1LQ9C091 1923 aaPredicted RBP23.99■■□□□ 1.43
ARHGEF40-204ENST00000555038 PHLPP2Q6ZVD8 1323 aa23.98■■□□□ 1.43
ARHGEF40-204ENST00000555038 HDLBPQ00341 1268 aaKnown RBP23.98■■□□□ 1.43
ARHGEF40-204ENST00000555038 CDC42EP5Q6NZY7 148 aa23.98■■□□□ 1.43
ARHGEF40-204ENST00000555038 STAMQ92783 540 aa23.98■■□□□ 1.43
ARHGEF40-204ENST00000555038 NAA15Q9BXJ9 866 aaKnown RBP23.98■■□□□ 1.43
ARHGEF40-204ENST00000555038 MMP10P09238 476 aa23.98■■□□□ 1.43
ARHGEF40-204ENST00000555038 STX17P56962 302 aa23.98■■□□□ 1.43
ARHGEF40-204ENST00000555038 GPATCH4Q5T3I0 446 aaKnown RBP23.98■■□□□ 1.43
ARHGEF40-204ENST00000555038 AKR1B15C9JRZ8 316 aaPredicted RBP23.97■■□□□ 1.43
ARHGEF40-204ENST00000555038 F8W031 263 aaPredicted RBP23.97■■□□□ 1.43
ARHGEF40-204ENST00000555038 CCNT1O60563 726 aaKnown RBP23.97■■□□□ 1.43
ARHGEF40-204ENST00000555038 PPP1R2P41236 205 aa23.97■■□□□ 1.43
ARHGEF40-204ENST00000555038 ETF1P62495 437 aaKnown RBP23.97■■□□□ 1.43
ARHGEF40-204ENST00000555038 ZNF543Q08ER8 600 aa23.97■■□□□ 1.43
ARHGEF40-204ENST00000555038 LETM2Q2VYF4 491 aa23.97■■□□□ 1.43
ARHGEF40-204ENST00000555038 APOBEC3HQ6NTF7 200 aaKnown RBP23.97■■□□□ 1.43
ARHGEF40-204ENST00000555038 RASGRP2Q7LDG7 609 aa23.97■■□□□ 1.43
ARHGEF40-204ENST00000555038 SMYD4Q8IYR2 804 aaPredicted RBP23.97■■□□□ 1.43
ARHGEF40-204ENST00000555038 ZDHHC15Q96MV8 337 aa23.97■■□□□ 1.43
ARHGEF40-204ENST00000555038 CPVLQ9H3G5 476 aa23.97■■□□□ 1.43
ARHGEF40-204ENST00000555038 L2HGDHQ9H9P8 463 aa23.97■■□□□ 1.43
ARHGEF40-204ENST00000555038 H7C1D1 291 aa23.96■■□□□ 1.43
ARHGEF40-204ENST00000555038 SHMT1P34896 483 aa23.96■■□□□ 1.43
ARHGEF40-204ENST00000555038 ADCY7P51828 1080 aa23.96■■□□□ 1.43
ARHGEF40-204ENST00000555038 STIM1Q13586 685 aa23.96■■□□□ 1.43
ARHGEF40-204ENST00000555038 DOK7Q18PE1 504 aa23.96■■□□□ 1.43
ARHGEF40-204ENST00000555038 STYK1Q6J9G0 422 aa23.96■■□□□ 1.43
ARHGEF40-204ENST00000555038 POTEAQ6S8J7 498 aa23.96■■□□□ 1.43
ARHGEF40-204ENST00000555038 CABP7Q86V35 215 aa23.96■■□□□ 1.43
ARHGEF40-204ENST00000555038 PPFIBP1Q86W92 1011 aa23.96■■□□□ 1.43
ARHGEF40-204ENST00000555038 NELFBQ8WX92 580 aa23.96■■□□□ 1.43
ARHGEF40-204ENST00000555038 TSC1Q92574 1164 aa23.96■■□□□ 1.43
ARHGEF40-204ENST00000555038 CCDC47Q96A33 483 aaKnown RBP23.96■■□□□ 1.43
ARHGEF40-204ENST00000555038 CCDC51Q96ER9 411 aa23.96■■□□□ 1.43
ARHGEF40-204ENST00000555038 DHX36Q9H2U1 1008 aaKnown RBP23.96■■□□□ 1.43
ARHGEF40-204ENST00000555038 NPM3O75607 178 aaKnown RBP23.96■■□□□ 1.43
ARHGEF40-204ENST00000555038 RHOBTB3O94955 611 aa23.96■■□□□ 1.43
ARHGEF40-204ENST00000555038 ADSSL1Q8N142 457 aa23.96■■□□□ 1.43
ARHGEF40-204ENST00000555038 TBCKQ8TEA7 893 aa23.96■■□□□ 1.43
ARHGEF40-204ENST00000555038 ERO1AQ96HE7 468 aa23.96■■□□□ 1.43
ARHGEF40-204ENST00000555038 UBA5Q9GZZ9 404 aa23.96■■□□□ 1.43
ARHGEF40-204ENST00000555038 VAT1LQ9HCJ6 419 aa23.96■■□□□ 1.43
ARHGEF40-204ENST00000555038 PNMA6FA0A0J9YX94 578 aa23.95■■□□□ 1.42
ARHGEF40-204ENST00000555038 APBA3O96018 575 aa23.95■■□□□ 1.42
ARHGEF40-204ENST00000555038 CDC25AP30304 524 aa23.95■■□□□ 1.42
ARHGEF40-204ENST00000555038 CRKP46108 304 aa23.95■■□□□ 1.42
ARHGEF40-204ENST00000555038 STRIP1Q5VSL9 837 aa23.95■■□□□ 1.42
ARHGEF40-204ENST00000555038 REXO1L1PQ8IX06 675 aa23.95■■□□□ 1.42
ARHGEF40-204ENST00000555038 LRRC47Q8N1G4 583 aaKnown RBP23.95■■□□□ 1.42
ARHGEF40-204ENST00000555038 HOXA7P31268 230 aaPredicted RBP23.94■■□□□ 1.42
ARHGEF40-204ENST00000555038 NCBP1Q09161 790 aaKnown RBP23.94■■□□□ 1.42
ARHGEF40-204ENST00000555038 TRIM14Q14142 442 aa23.94■■□□□ 1.42
ARHGEF40-204ENST00000555038 IGSF22Q8N9C0 903 aa23.94■■□□□ 1.42
ARHGEF40-204ENST00000555038 PPP2R2CQ9Y2T4 447 aa23.94■■□□□ 1.42
ARHGEF40-204ENST00000555038 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.94■■□□□ 1.42
ARHGEF40-204ENST00000555038 FRMPD2Q68DX3 1309 aaPredicted RBP23.94■■□□□ 1.42
ARHGEF40-204ENST00000555038 RGPD3A6NKT7 1758 aaPredicted RBP23.94■■□□□ 1.42
ARHGEF40-204ENST00000555038 RGPD4Q7Z3J3 1758 aa23.94■■□□□ 1.42
ARHGEF40-204ENST00000555038 SLU7O95391 586 aaKnown RBP23.93■■□□□ 1.42
ARHGEF40-204ENST00000555038 TPM1P09493 284 aa23.93■■□□□ 1.42
ARHGEF40-204ENST00000555038 AMPD3Q01432 767 aa23.93■■□□□ 1.42
ARHGEF40-204ENST00000555038 CNGA4Q8IV77 575 aa23.93■■□□□ 1.42
ARHGEF40-204ENST00000555038 GIMAP8Q8ND71 665 aaPredicted RBP23.93■■□□□ 1.42
ARHGEF40-204ENST00000555038 NOC3LQ8WTT2 800 aaKnown RBP23.93■■□□□ 1.42
ARHGEF40-204ENST00000555038 PP2D1A8MPX8 630 aa23.93■■□□□ 1.42
ARHGEF40-204ENST00000555038 TEX33O43247 280 aa23.93■■□□□ 1.42
ARHGEF40-204ENST00000555038 KLRC4O43908 158 aa23.93■■□□□ 1.42
ARHGEF40-204ENST00000555038 PRCPP42785 496 aa23.93■■□□□ 1.42
ARHGEF40-204ENST00000555038 FXR2P51116 673 aaKnown RBP eCLIP23.93■■□□□ 1.424e-8■■□□□ 13.2
ARHGEF40-204ENST00000555038 SCNN1DP51172 638 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms