RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 CHD2O14647 1828 aaKnown RBP9.91□□□□□ -0.82
SYNE2-217ENST00000555022 NRXN3Q9Y4C0 1643 aa9.9□□□□□ -0.82
SYNE2-217ENST00000555022 TNKSO95271 1327 aa9.9□□□□□ -0.82
SYNE2-217ENST00000555022 AKAP12Q02952 1782 aa9.9□□□□□ -0.82
SYNE2-217ENST00000555022 H7C1W4 665 aa9.9□□□□□ -0.82
SYNE2-217ENST00000555022 ZNF263O14978 683 aa9.9□□□□□ -0.82
SYNE2-217ENST00000555022 HEXIM1O94992 359 aaKnown RBP9.9□□□□□ -0.82
SYNE2-217ENST00000555022 EIF4A3P38919 411 aaKnown RBP9.9□□□□□ -0.82
SYNE2-217ENST00000555022 PSEN1P49768 467 aa9.9□□□□□ -0.82
SYNE2-217ENST00000555022 GFPT1Q06210 699 aaPredicted RBP9.9□□□□□ -0.82
SYNE2-217ENST00000555022 CKAP4Q07065 602 aaKnown RBP9.9□□□□□ -0.82
SYNE2-217ENST00000555022 WDR93Q6P2C0 686 aa9.9□□□□□ -0.82
SYNE2-217ENST00000555022 RRAGAQ7L523 313 aa9.9□□□□□ -0.82
SYNE2-217ENST00000555022 DZIP3Q86Y13 1208 aaKnown RBP9.9□□□□□ -0.82
SYNE2-217ENST00000555022 SPATA4Q8NEY3 305 aa9.9□□□□□ -0.82
SYNE2-217ENST00000555022 PLCD4Q9BRC7 762 aa9.9□□□□□ -0.82
SYNE2-217ENST00000555022 FAM184BQ9ULE4 1060 aa9.9□□□□□ -0.82
SYNE2-217ENST00000555022 RPS6KA5O75582 802 aa9.9□□□□□ -0.82
SYNE2-217ENST00000555022 LRRC41Q15345 812 aa9.9□□□□□ -0.82
SYNE2-217ENST00000555022 LBHD1Q9BQE6 289 aaPredicted RBP9.9□□□□□ -0.82
SYNE2-217ENST00000555022 HAUS4Q9H6D7 363 aa9.9□□□□□ -0.82
SYNE2-217ENST00000555022 TBC1D7Q9P0N9 293 aa9.9□□□□□ -0.82
SYNE2-217ENST00000555022 ODF2LQ9ULJ1 636 aa9.9□□□□□ -0.82
SYNE2-217ENST00000555022 DEXIO95424 95 aa9.89□□□□□ -0.83
SYNE2-217ENST00000555022 LSP1P33241 339 aa9.89□□□□□ -0.83
SYNE2-217ENST00000555022 BCAMP50895 628 aa9.89□□□□□ -0.83
SYNE2-217ENST00000555022 AKNAD1Q5T1N1 836 aa9.89□□□□□ -0.83
SYNE2-217ENST00000555022 DYMQ7RTS9 669 aa9.89□□□□□ -0.83
SYNE2-217ENST00000555022 IRF2BP1Q8IU81 584 aa9.89□□□□□ -0.83
SYNE2-217ENST00000555022 ZKSCAN4Q969J2 545 aaPredicted RBP9.89□□□□□ -0.83
SYNE2-217ENST00000555022 STRBPQ96SI9 672 aaKnown RBP9.89□□□□□ -0.83
SYNE2-217ENST00000555022 TUBGCP2Q9BSJ2 902 aa9.89□□□□□ -0.83
SYNE2-217ENST00000555022 NOC4LQ9BVI4 516 aaKnown RBP9.89□□□□□ -0.83
SYNE2-217ENST00000555022 CCDC113Q9H0I3 377 aa9.89□□□□□ -0.83
SYNE2-217ENST00000555022 SLC39A2Q9NP94 309 aa9.89□□□□□ -0.83
SYNE2-217ENST00000555022 SALL4Q9UJQ4 1053 aa9.89□□□□□ -0.83
SYNE2-217ENST00000555022 CEP131Q9UPN4 1083 aa9.89□□□□□ -0.83
SYNE2-217ENST00000555022 TLDC2A0PJX2 215 aa9.89□□□□□ -0.83
SYNE2-217ENST00000555022 IFNAR1P17181 557 aa9.89□□□□□ -0.83
SYNE2-217ENST00000555022 CYLC1P35663 651 aaPredicted RBP9.89□□□□□ -0.83
SYNE2-217ENST00000555022 ASIC1P78348 528 aa9.89□□□□□ -0.83
SYNE2-217ENST00000555022 EHHADHQ08426 723 aa9.89□□□□□ -0.83
SYNE2-217ENST00000555022 IL17AQ16552 155 aa9.89□□□□□ -0.83
SYNE2-217ENST00000555022 NAIF1Q69YI7 327 aaPredicted RBP9.89□□□□□ -0.83
SYNE2-217ENST00000555022 KANK3Q6NY19 840 aa9.89□□□□□ -0.83
SYNE2-217ENST00000555022 PNMA8AQ86V59 439 aaPredicted RBP9.89□□□□□ -0.83
SYNE2-217ENST00000555022 MDM1Q8TC05 714 aa9.89□□□□□ -0.83
SYNE2-217ENST00000555022 ZNF473Q8WTR7 871 aaKnown RBP9.89□□□□□ -0.83
SYNE2-217ENST00000555022 AP1M1Q9BXS5 423 aa9.89□□□□□ -0.83
SYNE2-217ENST00000555022 PIK3C2AO00443 1686 aa9.89□□□□□ -0.83
SYNE2-217ENST00000555022 PHF20L1A8MW92 1017 aa9.89□□□□□ -0.83
SYNE2-217ENST00000555022 ZFYP08048 801 aaPredicted RBP9.89□□□□□ -0.83
SYNE2-217ENST00000555022 NR1D1P20393 614 aa9.89□□□□□ -0.83
SYNE2-217ENST00000555022 AARSP49588 968 aaKnown RBP eCLIP9.89□□□□□ -0.83
SYNE2-217ENST00000555022 DYNLL1P63167 89 aaKnown RBP9.89□□□□□ -0.83
SYNE2-217ENST00000555022 CCDC40Q4G0X9 1142 aa9.89□□□□□ -0.83
SYNE2-217ENST00000555022 CCDC13Q8IYE1 715 aa9.89□□□□□ -0.83
SYNE2-217ENST00000555022 HYOU1Q9Y4L1 999 aa9.89□□□□□ -0.83
SYNE2-217ENST00000555022 FMN2Q9NZ56 1722 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 BUB1BO60566 1050 aaPredicted RBP9.88□□□□□ -0.83
SYNE2-217ENST00000555022 GBP2P32456 591 aaPredicted RBP9.88□□□□□ -0.83
SYNE2-217ENST00000555022 SLC1A4P43007 532 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 QPCTQ16769 361 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 CCDC121Q6ZUS5 278 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 LRP10Q7Z4F1 713 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 IFNL2Q8IZJ0 200 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 UBLCP1Q8WVY7 318 aaPredicted RBP9.88□□□□□ -0.83
SYNE2-217ENST00000555022 TCP11Q8WWU5 503 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 WASF1Q92558 559 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 THOC1Q96FV9 657 aaKnown RBP9.88□□□□□ -0.83
SYNE2-217ENST00000555022 CNOT6LQ96LI5 555 aaKnown RBP9.88□□□□□ -0.83
SYNE2-217ENST00000555022 CCT8L2Q96SF2 557 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 OSBPL9Q96SU4 736 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 LRRC4CQ9HCJ2 640 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 SLC40A1Q9NP59 571 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 RGPD2P0DJD1 1756 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 ZNF233A6NK53 670 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 DCDC2CA8MYV0 355 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 TACC1O75410 805 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 PAFAH1B1P43034 410 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 HAUS3Q68CZ6 603 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 TMEM87BQ96K49 555 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 DPH5Q9H2P9 285 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 VAT1LQ9HCJ6 419 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 KLC4Q9NSK0 619 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 RIPOR2Q9Y4F9 1068 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 MYH13Q9UKX3 1938 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 PSMD14O00487 310 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 MEFVO15553 781 aaPredicted RBP9.88□□□□□ -0.83
SYNE2-217ENST00000555022 OPA1O60313 960 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 CYP7A1P22680 504 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 COPB2P35606 906 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 USP8P40818 1118 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 MAGEA1P43355 309 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 ACCSLQ4AC99 568 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 POTEDQ86YR6 584 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 CREG2Q8IUH2 290 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 SUGP1Q8IWZ8 645 aaKnown RBP9.88□□□□□ -0.83
SYNE2-217ENST00000555022 TRIML1Q8N9V2 468 aa9.88□□□□□ -0.83
SYNE2-217ENST00000555022 AENQ8WTP8 325 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms