RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 TMTC3Q6ZXV5 915 aa9.34□□□□□ -0.91
LINC01397-201ENST00000554808 ADGRF4Q8IZF3 695 aa9.34□□□□□ -0.91
LINC01397-201ENST00000554808 SAMD3Q8N6K7 520 aa9.34□□□□□ -0.91
LINC01397-201ENST00000554808 SHCBP1Q8NEM2 672 aa9.34□□□□□ -0.91
LINC01397-201ENST00000554808 GPRC5AQ8NFJ5 357 aa9.34□□□□□ -0.91
LINC01397-201ENST00000554808 GTF3C6Q969F1 213 aa9.34□□□□□ -0.91
LINC01397-201ENST00000554808 SNX21Q969T3 373 aa9.34□□□□□ -0.91
LINC01397-201ENST00000554808 KIFC2Q96AC6 838 aa9.34□□□□□ -0.91
LINC01397-201ENST00000554808 ATG4CQ96DT6 458 aa9.34□□□□□ -0.91
LINC01397-201ENST00000554808 MTMR8Q96EF0 704 aa9.34□□□□□ -0.91
LINC01397-201ENST00000554808 RRP36Q96EU6 259 aaKnown RBP9.34□□□□□ -0.91
LINC01397-201ENST00000554808 P2RX7Q99572 595 aaKnown RBP9.34□□□□□ -0.91
LINC01397-201ENST00000554808 MYL10Q9BUA6 226 aa9.34□□□□□ -0.91
LINC01397-201ENST00000554808 TEX13BQ9BXU2 312 aa9.34□□□□□ -0.91
LINC01397-201ENST00000554808 GPHNQ9NQX3 736 aaPredicted RBP9.34□□□□□ -0.91
LINC01397-201ENST00000554808 RNF186Q9NXI6 227 aa9.34□□□□□ -0.91
LINC01397-201ENST00000554808 FBXO40Q9UH90 709 aa9.34□□□□□ -0.91
LINC01397-201ENST00000554808 PRR12Q9ULL5 1215 aa9.34□□□□□ -0.91
LINC01397-201ENST00000554808 KIF3AQ9Y496 699 aa9.34□□□□□ -0.91
LINC01397-201ENST00000554808 CNTNAP5Q8WYK1 1306 aa9.33□□□□□ -0.92
LINC01397-201ENST00000554808 STK36Q9NRP7 1315 aa9.33□□□□□ -0.92
LINC01397-201ENST00000554808 FRMPD3Q5JV73 1810 aa9.33□□□□□ -0.92
LINC01397-201ENST00000554808 PNMA6FA0A0J9YX94 578 aa9.33□□□□□ -0.92
LINC01397-201ENST00000554808 TRPA1O75762 1119 aa9.33□□□□□ -0.92
LINC01397-201ENST00000554808 GNRH1P01148 92 aa9.33□□□□□ -0.92
LINC01397-201ENST00000554808 ICAM1P05362 532 aa9.33□□□□□ -0.92
LINC01397-201ENST00000554808 GOLGA8HP0CJ92 632 aa9.33□□□□□ -0.92
LINC01397-201ENST00000554808 CYP2C8P10632 490 aa9.33□□□□□ -0.92
LINC01397-201ENST00000554808 IFNAR1P17181 557 aa9.33□□□□□ -0.92
LINC01397-201ENST00000554808 MAPK4P31152 587 aa9.33□□□□□ -0.92
LINC01397-201ENST00000554808 HMGN5P82970 282 aaKnown RBP9.33□□□□□ -0.92
LINC01397-201ENST00000554808 CDC37Q16543 378 aaPredicted RBP9.33□□□□□ -0.92
LINC01397-201ENST00000554808 C17orf99Q6UX52 265 aa9.33□□□□□ -0.92
LINC01397-201ENST00000554808 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.33□□□□□ -0.92
LINC01397-201ENST00000554808 RIOX2Q8IUF8 465 aa9.33□□□□□ -0.92
LINC01397-201ENST00000554808 HSCBQ8IWL3 235 aa9.33□□□□□ -0.92
LINC01397-201ENST00000554808 CCAR1Q8IX12 1150 aaKnown RBP9.33□□□□□ -0.92
LINC01397-201ENST00000554808 STAG2Q8N3U4 1231 aa9.33□□□□□ -0.92
LINC01397-201ENST00000554808 CCDC12Q8WUD4 166 aaPredicted RBP9.33□□□□□ -0.92
LINC01397-201ENST00000554808 WASF1Q92558 559 aa9.33□□□□□ -0.92
LINC01397-201ENST00000554808 LLPHQ9BRT6 129 aaKnown RBP9.33□□□□□ -0.92
LINC01397-201ENST00000554808 AMNQ9BXJ7 453 aa9.33□□□□□ -0.92
LINC01397-201ENST00000554808 SPATC1LQ9H0A9 340 aa9.33□□□□□ -0.92
LINC01397-201ENST00000554808 MROH8Q9H579 483 aa9.33□□□□□ -0.92
LINC01397-201ENST00000554808 FBXO28Q9NVF7 368 aa9.33□□□□□ -0.92
LINC01397-201ENST00000554808 ZNF214Q9UL59 606 aaPredicted RBP9.33□□□□□ -0.92
LINC01397-201ENST00000554808 TPCN1Q9ULQ1 816 aa9.33□□□□□ -0.92
LINC01397-201ENST00000554808 HPS5Q9UPZ3 1129 aa9.33□□□□□ -0.92
LINC01397-201ENST00000554808 ABCB11O95342 1321 aa9.32□□□□□ -0.92
LINC01397-201ENST00000554808 STRNO43815 780 aa9.32□□□□□ -0.92
LINC01397-201ENST00000554808 DEXIO95424 95 aa9.32□□□□□ -0.92
LINC01397-201ENST00000554808 XBP1P17861 261 aa9.32□□□□□ -0.92
LINC01397-201ENST00000554808 RXRAP19793 462 aa9.32□□□□□ -0.92
LINC01397-201ENST00000554808 CDC27P30260 824 aa9.32□□□□□ -0.92
LINC01397-201ENST00000554808 SLC16A2P36021 539 aa9.32□□□□□ -0.92
LINC01397-201ENST00000554808 STAT3P40763 770 aa9.32□□□□□ -0.92
LINC01397-201ENST00000554808 SP3Q02447 781 aa9.32□□□□□ -0.92
LINC01397-201ENST00000554808 ME3Q16798 604 aa9.32□□□□□ -0.92
LINC01397-201ENST00000554808 SNRNP48Q6IEG0 339 aaKnown RBP9.32□□□□□ -0.92
LINC01397-201ENST00000554808 TTBK2Q6IQ55 1244 aa9.32□□□□□ -0.92
LINC01397-201ENST00000554808 PPP1R18Q6NYC8 613 aa9.32□□□□□ -0.92
LINC01397-201ENST00000554808 FBXO11Q86XK2 927 aa9.32□□□□□ -0.92
LINC01397-201ENST00000554808 CCDC144CPQ8IYA2 1237 aa9.32□□□□□ -0.92
LINC01397-201ENST00000554808 ANKRD13CQ8N6S4 541 aa9.32□□□□□ -0.92
LINC01397-201ENST00000554808 CHST13Q8NET6 341 aa9.32□□□□□ -0.92
LINC01397-201ENST00000554808 REPS2Q8NFH8 660 aa9.32□□□□□ -0.92
LINC01397-201ENST00000554808 ERO1AQ96HE7 468 aa9.32□□□□□ -0.92
LINC01397-201ENST00000554808 PAGR1Q9BTK6 254 aa9.32□□□□□ -0.92
LINC01397-201ENST00000554808 GLT8D2Q9H1C3 349 aa9.32□□□□□ -0.92
LINC01397-201ENST00000554808 JMJD4Q9H9V9 463 aa9.32□□□□□ -0.92
LINC01397-201ENST00000554808 CWC22Q9HCG8 908 aaKnown RBP9.32□□□□□ -0.92
LINC01397-201ENST00000554808 MAP3K20Q9NYL2 800 aaKnown RBP9.32□□□□□ -0.92
LINC01397-201ENST00000554808 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.32□□□□□ -0.92
LINC01397-201ENST00000554808 IVNS1ABPQ9Y6Y0 642 aa9.32□□□□□ -0.92
LINC01397-201ENST00000554808 TCHHQ07283 1943 aa9.32□□□□□ -0.92
LINC01397-201ENST00000554808 PFASO15067 1338 aa9.31□□□□□ -0.92
LINC01397-201ENST00000554808 K7ELQ4 463 aaPredicted RBP9.31□□□□□ -0.92
LINC01397-201ENST00000554808 GPR25O00155 361 aa9.31□□□□□ -0.92
LINC01397-201ENST00000554808 PRPF3O43395 683 aaKnown RBP9.31□□□□□ -0.92
LINC01397-201ENST00000554808 CYTH3O43739 400 aa9.31□□□□□ -0.92
LINC01397-201ENST00000554808 FKTNO75072 461 aa9.31□□□□□ -0.92
LINC01397-201ENST00000554808 PLEKHA8P1O95397 391 aa9.31□□□□□ -0.92
LINC01397-201ENST00000554808 FMNL1O95466 1100 aaPredicted RBP9.31□□□□□ -0.92
LINC01397-201ENST00000554808 HOXD10P28358 340 aa9.31□□□□□ -0.92
LINC01397-201ENST00000554808 ADD1P35611 737 aaKnown RBP9.31□□□□□ -0.92
LINC01397-201ENST00000554808 PRMT2P55345 433 aa9.31□□□□□ -0.92
LINC01397-201ENST00000554808 CCT2P78371 535 aaKnown RBP9.31□□□□□ -0.92
LINC01397-201ENST00000554808 SSRP1Q08945 709 aaKnown RBP9.31□□□□□ -0.92
LINC01397-201ENST00000554808 SCRN1Q12765 414 aa9.31□□□□□ -0.92
LINC01397-201ENST00000554808 STK3Q13188 491 aa9.31□□□□□ -0.92
LINC01397-201ENST00000554808 BECN1Q14457 450 aa9.31□□□□□ -0.92
LINC01397-201ENST00000554808 PLS1Q14651 629 aa9.31□□□□□ -0.92
LINC01397-201ENST00000554808 TMEM132BQ14DG7 1078 aa9.31□□□□□ -0.92
LINC01397-201ENST00000554808 NTRK3Q16288 839 aa9.31□□□□□ -0.92
LINC01397-201ENST00000554808 QRICH1Q2TAL8 776 aa9.31□□□□□ -0.92
LINC01397-201ENST00000554808 SAMD1Q6SPF0 538 aaPredicted RBP9.31□□□□□ -0.92
LINC01397-201ENST00000554808 NOL8Q76FK4 1167 aaKnown RBP9.31□□□□□ -0.92
LINC01397-201ENST00000554808 RASGRP2Q7LDG7 609 aa9.31□□□□□ -0.92
LINC01397-201ENST00000554808 MCF2L2Q86YR7 1114 aa9.31□□□□□ -0.92
LINC01397-201ENST00000554808 ABRAQ8N0Z2 381 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms