RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 H2AFZP0C0S5 128 aa15.32■□□□□ 0.04
VTI1B-204ENST00000554659 H2AFVQ71UI9 128 aa15.32■□□□□ 0.04
VTI1B-204ENST00000554659 SLC35F6Q8N357 371 aa15.32■□□□□ 0.04
VTI1B-204ENST00000554659 GSDMBQ8TAX9 411 aa15.32■□□□□ 0.04
VTI1B-204ENST00000554659 PCDHA12Q9UN75 941 aa15.32■□□□□ 0.04
VTI1B-204ENST00000554659 DAPK3O43293 454 aa15.32■□□□□ 0.04
VTI1B-204ENST00000554659 POLR2FP61218 127 aaKnown RBP15.32■□□□□ 0.04
VTI1B-204ENST00000554659 LRRC24Q50LG9 513 aa15.32■□□□□ 0.04
VTI1B-204ENST00000554659 TPH2Q8IWU9 490 aa15.32■□□□□ 0.04
VTI1B-204ENST00000554659 RETREG2Q8NC44 543 aa15.32■□□□□ 0.04
VTI1B-204ENST00000554659 MUM1Q2TAK8 710 aa15.32■□□□□ 0.04
VTI1B-204ENST00000554659 DDX27Q96GQ7 796 aaKnown RBP15.32■□□□□ 0.04
VTI1B-204ENST00000554659 TTC37Q6PGP7 1564 aa15.32■□□□□ 0.04
VTI1B-204ENST00000554659 GAS7O60861 476 aa15.32■□□□□ 0.04
VTI1B-204ENST00000554659 FMNL1O95466 1100 aaPredicted RBP15.32■□□□□ 0.04
VTI1B-204ENST00000554659 VTI1AQ96AJ9 217 aa15.32■□□□□ 0.04
VTI1B-204ENST00000554659 RNF26Q9BY78 433 aaPredicted RBP15.32■□□□□ 0.04
VTI1B-204ENST00000554659 SLC8A1P32418 973 aa15.31■□□□□ 0.04
VTI1B-204ENST00000554659 YWHAEP62258 255 aaKnown RBP15.31■□□□□ 0.04
VTI1B-204ENST00000554659 TYW1Q9NV66 732 aaKnown RBP15.31■□□□□ 0.04
VTI1B-204ENST00000554659 PHBP35232 272 aa15.31■□□□□ 0.04
VTI1B-204ENST00000554659 TRIM68Q6AZZ1 485 aa15.31■□□□□ 0.04
VTI1B-204ENST00000554659 RILPQ96NA2 401 aa15.31■□□□□ 0.04
VTI1B-204ENST00000554659 CD19P15391 556 aa15.31■□□□□ 0.04
VTI1B-204ENST00000554659 RPS8P62241 208 aaKnown RBP15.31■□□□□ 0.04
VTI1B-204ENST00000554659 FAM26FQ5R3K3 315 aa15.31■□□□□ 0.04
VTI1B-204ENST00000554659 LINC00301Q8NCQ3 95 aa15.31■□□□□ 0.04
VTI1B-204ENST00000554659 CNOT6LQ96LI5 555 aaKnown RBP15.31■□□□□ 0.04
VTI1B-204ENST00000554659 TUBGCP2Q9BSJ2 902 aa15.31■□□□□ 0.04
VTI1B-204ENST00000554659 RIC8AQ9NPQ8 531 aa15.31■□□□□ 0.04
VTI1B-204ENST00000554659 PICK1Q9NRD5 415 aa15.31■□□□□ 0.04
VTI1B-204ENST00000554659 BZW2Q9Y6E2 419 aaKnown RBP15.31■□□□□ 0.04
VTI1B-204ENST00000554659 APOA5Q6Q788 366 aa15.31■□□□□ 0.04
VTI1B-204ENST00000554659 SDR42E1Q8WUS8 393 aa15.31■□□□□ 0.04
VTI1B-204ENST00000554659 ATP2A3Q93084 1043 aa15.31■□□□□ 0.04
VTI1B-204ENST00000554659 PSTPIP2Q9H939 334 aa15.31■□□□□ 0.04
VTI1B-204ENST00000554659 TMOD4Q9NZQ9 345 aa15.31■□□□□ 0.04
VTI1B-204ENST00000554659 BCAP29Q9UHQ4 241 aa15.31■□□□□ 0.04
VTI1B-204ENST00000554659 ZBED4O75132 1171 aa15.3■□□□□ 0.04
VTI1B-204ENST00000554659 KLRF2D3W0D1 207 aa15.3■□□□□ 0.04
VTI1B-204ENST00000554659 HIP1RO75146 1068 aa15.3■□□□□ 0.04
VTI1B-204ENST00000554659 CYP2J2P51589 502 aa15.3■□□□□ 0.04
VTI1B-204ENST00000554659 DHTKD1Q96HY7 919 aaPredicted RBP15.3■□□□□ 0.04
VTI1B-204ENST00000554659 SLC39A2Q9NP94 309 aa15.3■□□□□ 0.04
VTI1B-204ENST00000554659 ATP7BP35670 1465 aa15.3■□□□□ 0.04
VTI1B-204ENST00000554659 KIF23Q02241 960 aaPredicted RBP15.3■□□□□ 0.04
VTI1B-204ENST00000554659 DPP8Q6V1X1 898 aaPredicted RBP15.3■□□□□ 0.04
VTI1B-204ENST00000554659 RUNDC3BQ96NL0 473 aa15.3■□□□□ 0.04
VTI1B-204ENST00000554659 DPH5Q9H2P9 285 aa15.3■□□□□ 0.04
VTI1B-204ENST00000554659 RIPOR2Q9Y4F9 1068 aa15.3■□□□□ 0.04
VTI1B-204ENST00000554659 PPP2R5CQ13362 524 aa15.3■□□□□ 0.04
VTI1B-204ENST00000554659 ADAM9Q13443 819 aa15.3■□□□□ 0.04
VTI1B-204ENST00000554659 CCDC13Q8IYE1 715 aa15.3■□□□□ 0.04
VTI1B-204ENST00000554659 BBOF1Q8ND07 529 aa15.3■□□□□ 0.04
VTI1B-204ENST00000554659 RAB20Q9NX57 234 aa15.3■□□□□ 0.04
VTI1B-204ENST00000554659 MLH3Q9UHC1 1453 aa15.3■□□□□ 0.04
VTI1B-204ENST00000554659 TMEM2Q9UHN6 1383 aa15.3■□□□□ 0.04
VTI1B-204ENST00000554659 ADCY8P40145 1251 aa15.3■□□□□ 0.04
VTI1B-204ENST00000554659 LIG3P49916 1009 aa15.3■□□□□ 0.04
VTI1B-204ENST00000554659 EPHB4P54760 987 aa15.3■□□□□ 0.04
VTI1B-204ENST00000554659 GUCY2DQ02846 1103 aa15.3■□□□□ 0.04
VTI1B-204ENST00000554659 RBL2Q08999 1139 aa15.3■□□□□ 0.04
VTI1B-204ENST00000554659 PHLDB3Q6NSJ2 640 aa15.3■□□□□ 0.04
VTI1B-204ENST00000554659 TTLL7Q6ZT98 887 aa15.3■□□□□ 0.04
VTI1B-204ENST00000554659 RNF168Q8IYW5 571 aaPredicted RBP15.3■□□□□ 0.04
VTI1B-204ENST00000554659 RDH13Q8NBN7 331 aa15.3■□□□□ 0.04
VTI1B-204ENST00000554659 AFG3L2Q9Y4W6 797 aa15.3■□□□□ 0.04
VTI1B-204ENST00000554659 COL4A3BPQ9Y5P4 624 aa15.3■□□□□ 0.04
VTI1B-204ENST00000554659 MAGI3Q5TCQ9 1506 aa15.29■□□□□ 0.04
VTI1B-204ENST00000554659 OTUD6AQ7L8S5 288 aa15.29■□□□□ 0.04
VTI1B-204ENST00000554659 RNF34Q969K3 372 aa15.29■□□□□ 0.04
VTI1B-204ENST00000554659 UIMC1Q96RL1 719 aa15.29■□□□□ 0.04
VTI1B-204ENST00000554659 TNNI1P19237 187 aa15.29■□□□□ 0.04
VTI1B-204ENST00000554659 ZNF589Q86UQ0 364 aaPredicted RBP15.29■□□□□ 0.04
VTI1B-204ENST00000554659 GPKOWQ92917 476 aaPredicted RBP eCLIP15.29■□□□□ 0.04
VTI1B-204ENST00000554659 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.29■□□□□ 0.04
VTI1B-204ENST00000554659 TLR7Q9NYK1 1049 aaKnown RBP15.29■□□□□ 0.04
VTI1B-204ENST00000554659 CCDC151A5D8V7 595 aa15.29■□□□□ 0.04
VTI1B-204ENST00000554659 SEC31AO94979 1220 aaKnown RBP15.29■□□□□ 0.04
VTI1B-204ENST00000554659 ZYXQ15942 572 aaKnown RBP15.29■□□□□ 0.04
VTI1B-204ENST00000554659 TAF12Q16514 161 aa15.29■□□□□ 0.04
VTI1B-204ENST00000554659 MIER3Q7Z3K6 550 aa15.29■□□□□ 0.04
VTI1B-204ENST00000554659 PALM2Q8IXS6 379 aa15.29■□□□□ 0.04
VTI1B-204ENST00000554659 KRT12Q99456 494 aa15.29■□□□□ 0.04
VTI1B-204ENST00000554659 DDX25Q9UHL0 483 aaKnown RBP15.29■□□□□ 0.04
VTI1B-204ENST00000554659 CASC4Q6P4E1 433 aa15.29■□□□□ 0.04
VTI1B-204ENST00000554659 RSAD2Q8WXG1 361 aa15.29■□□□□ 0.04
VTI1B-204ENST00000554659 AK8Q96MA6 479 aa15.29■□□□□ 0.04
VTI1B-204ENST00000554659 SPTLC3Q9NUV7 552 aa15.29■□□□□ 0.04
VTI1B-204ENST00000554659 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.29■□□□□ 0.04
VTI1B-204ENST00000554659 USH1CQ9Y6N9 552 aa15.29■□□□□ 0.04
VTI1B-204ENST00000554659 NOP56O00567 594 aaKnown RBP15.28■□□□□ 0.04
VTI1B-204ENST00000554659 ENOX1Q8TC92 643 aaKnown RBP15.28■□□□□ 0.04
VTI1B-204ENST00000554659 AZI2Q9H6S1 392 aa15.28■□□□□ 0.04
VTI1B-204ENST00000554659 VCX3AQ9NNX9 186 aa15.28■□□□□ 0.04
VTI1B-204ENST00000554659 MYL1P05976 194 aa15.28■□□□□ 0.04
VTI1B-204ENST00000554659 BCAMP50895 628 aa15.28■□□□□ 0.04
VTI1B-204ENST00000554659 SH2D4BQ5SQS7 431 aa15.28■□□□□ 0.04
VTI1B-204ENST00000554659 MAP3K21Q5TCX8 1036 aa15.28■□□□□ 0.04
VTI1B-204ENST00000554659 VSTM4Q8IW00 320 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms