RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 DGKHQ86XP1 1220 aa10.26□□□□□ -0.77
ACTN1-213ENST00000554508 TRERF1Q96PN7 1200 aa10.26□□□□□ -0.77
ACTN1-213ENST00000554508 KRT23Q9C075 422 aa10.26□□□□□ -0.77
ACTN1-213ENST00000554508 CNNM2Q9H8M5 875 aa10.26□□□□□ -0.77
ACTN1-213ENST00000554508 PNMA2Q9UL42 364 aa10.26□□□□□ -0.77
ACTN1-213ENST00000554508 MTMR7Q9Y216 660 aa10.26□□□□□ -0.77
ACTN1-213ENST00000554508 CNPY2Q9Y2B0 182 aa10.26□□□□□ -0.77
ACTN1-213ENST00000554508 TRIOBPQ9H2D6 2365 aa10.26□□□□□ -0.77
ACTN1-213ENST00000554508 PFASO15067 1338 aa10.26□□□□□ -0.77
ACTN1-213ENST00000554508 ZNF536O15090 1300 aa10.26□□□□□ -0.77
ACTN1-213ENST00000554508 KBTBD13C9JR72 458 aa10.25□□□□□ -0.77
ACTN1-213ENST00000554508 KDM4AO75164 1064 aa10.25□□□□□ -0.77
ACTN1-213ENST00000554508 ZNF865P0CJ78 1059 aaPredicted RBP10.25□□□□□ -0.77
ACTN1-213ENST00000554508 SNHG28P0DPA3 235 aa10.25□□□□□ -0.77
ACTN1-213ENST00000554508 RARBP10826 455 aa10.25□□□□□ -0.77
ACTN1-213ENST00000554508 PDHBP11177 359 aa10.25□□□□□ -0.77
ACTN1-213ENST00000554508 ALAS1P13196 640 aa10.25□□□□□ -0.77
ACTN1-213ENST00000554508 CHMLP26374 656 aa10.25□□□□□ -0.77
ACTN1-213ENST00000554508 SYDE2Q5VT97 1194 aa10.25□□□□□ -0.77
ACTN1-213ENST00000554508 CHRDL2Q6WN34 429 aa10.25□□□□□ -0.77
ACTN1-213ENST00000554508 C7orf61Q8IZ16 206 aa10.25□□□□□ -0.77
ACTN1-213ENST00000554508 ANKS1AQ92625 1134 aa10.25□□□□□ -0.77
ACTN1-213ENST00000554508 CHMP4CQ96CF2 233 aa10.25□□□□□ -0.77
ACTN1-213ENST00000554508 AGBL1Q96MI9 1066 aa10.25□□□□□ -0.77
ACTN1-213ENST00000554508 SENP6Q9GZR1 1112 aaPredicted RBP10.25□□□□□ -0.77
ACTN1-213ENST00000554508 RANBP17Q9H2T7 1088 aaKnown RBP10.25□□□□□ -0.77
ACTN1-213ENST00000554508 HOMER2Q9NSB8 354 aa10.25□□□□□ -0.77
ACTN1-213ENST00000554508 RNF146Q9NTX7 359 aa10.25□□□□□ -0.77
ACTN1-213ENST00000554508 ZSWIM5Q9P217 1185 aa10.25□□□□□ -0.77
ACTN1-213ENST00000554508 NEDD4P46934 1319 aa10.25□□□□□ -0.77
ACTN1-213ENST00000554508 A0A1W2PPC1 479 aa10.24□□□□□ -0.77
ACTN1-213ENST00000554508 B4E1Z4 1266 aa10.24□□□□□ -0.77
ACTN1-213ENST00000554508 POTEB2H3BUK9 544 aa10.24□□□□□ -0.77
ACTN1-213ENST00000554508 SNAI1O95863 264 aaPredicted RBP10.24□□□□□ -0.77
ACTN1-213ENST00000554508 ICAM1P05362 532 aa10.24□□□□□ -0.77
ACTN1-213ENST00000554508 AKR1A1P14550 325 aa10.24□□□□□ -0.77
ACTN1-213ENST00000554508 ZNF543Q08ER8 600 aa10.24□□□□□ -0.77
ACTN1-213ENST00000554508 GPATCH4Q5T3I0 446 aaKnown RBP10.24□□□□□ -0.77
ACTN1-213ENST00000554508 GJC2Q5T442 439 aaPredicted RBP10.24□□□□□ -0.77
ACTN1-213ENST00000554508 ANO1Q5XXA6 986 aa10.24□□□□□ -0.77
ACTN1-213ENST00000554508 TTBK2Q6IQ55 1244 aa10.24□□□□□ -0.77
ACTN1-213ENST00000554508 CCDC174Q6PII3 467 aa10.24□□□□□ -0.77
ACTN1-213ENST00000554508 RNF180Q86T96 592 aa10.24□□□□□ -0.77
ACTN1-213ENST00000554508 FAM133AQ8N9E0 248 aa10.24□□□□□ -0.77
ACTN1-213ENST00000554508 ZSCAN10Q96SZ4 725 aaPredicted RBP10.24□□□□□ -0.77
ACTN1-213ENST00000554508 ZKSCAN3Q9BRR0 538 aa10.24□□□□□ -0.77
ACTN1-213ENST00000554508 PRO3102Q9H379 93 aa10.24□□□□□ -0.77
ACTN1-213ENST00000554508 ABHD16BQ9H3Z7 469 aa10.24□□□□□ -0.77
ACTN1-213ENST00000554508 GPCPD1Q9NPB8 672 aa10.24□□□□□ -0.77
ACTN1-213ENST00000554508 XPNPEP3Q9NQH7 507 aa10.24□□□□□ -0.77
ACTN1-213ENST00000554508 PPP4R2Q9NY27 417 aa10.24□□□□□ -0.77
ACTN1-213ENST00000554508 FAM184BQ9ULE4 1060 aa10.24□□□□□ -0.77
ACTN1-213ENST00000554508 CCPG1Q9ULG6 757 aa10.24□□□□□ -0.77
ACTN1-213ENST00000554508 ASB14A6NK59 587 aa10.23□□□□□ -0.77
ACTN1-213ENST00000554508 TAL1P17542 331 aaPredicted RBP10.23□□□□□ -0.77
ACTN1-213ENST00000554508 SLC16A2P36021 539 aa10.23□□□□□ -0.77
ACTN1-213ENST00000554508 TRDNQ13061 729 aa10.23□□□□□ -0.77
ACTN1-213ENST00000554508 ACVR2BQ13705 512 aa10.23□□□□□ -0.77
ACTN1-213ENST00000554508 LRRC41Q15345 812 aa10.23□□□□□ -0.77
ACTN1-213ENST00000554508 LRRC26Q2I0M4 334 aa10.23□□□□□ -0.77
ACTN1-213ENST00000554508 CENPQQ7L2Z9 268 aaPredicted RBP10.23□□□□□ -0.77
ACTN1-213ENST00000554508 RASGRP2Q7LDG7 609 aa10.23□□□□□ -0.77
ACTN1-213ENST00000554508 PNMA1Q8ND90 353 aa10.23□□□□□ -0.77
ACTN1-213ENST00000554508 IL25Q9H293 177 aa10.23□□□□□ -0.77
ACTN1-213ENST00000554508 KAT14Q9H8E8 782 aa10.23□□□□□ -0.77
ACTN1-213ENST00000554508 A1CFQ9NQ94 594 aaKnown RBP10.23□□□□□ -0.77
ACTN1-213ENST00000554508 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.23□□□□□ -0.77
ACTN1-213ENST00000554508 RBM27Q9P2N5 1060 aaKnown RBP10.23□□□□□ -0.77
ACTN1-213ENST00000554508 U3KPZ7 1027 aaPredicted RBP10.23□□□□□ -0.77
ACTN1-213ENST00000554508 FRMPD2Q68DX3 1309 aaPredicted RBP10.23□□□□□ -0.77
ACTN1-213ENST00000554508 LCTP09848 1927 aa10.23□□□□□ -0.77
ACTN1-213ENST00000554508 LOC102724159A0A0B4J2E5 919 aa10.22□□□□□ -0.77
ACTN1-213ENST00000554508 SGSM2O43147 1006 aa10.22□□□□□ -0.77
ACTN1-213ENST00000554508 BMP8BP34820 402 aa10.22□□□□□ -0.77
ACTN1-213ENST00000554508 SNAP25P60880 206 aa10.22□□□□□ -0.77
ACTN1-213ENST00000554508 CNTN2Q02246 1040 aa10.22□□□□□ -0.77
ACTN1-213ENST00000554508 PWP2Q15269 919 aaKnown RBP10.22□□□□□ -0.77
ACTN1-213ENST00000554508 SLC39A5Q6ZMH5 540 aa10.22□□□□□ -0.77
ACTN1-213ENST00000554508 ARMCX2Q7L311 632 aa10.22□□□□□ -0.77
ACTN1-213ENST00000554508 CCDC144CPQ8IYA2 1237 aa10.22□□□□□ -0.77
ACTN1-213ENST00000554508 ENAHQ8N8S7 591 aaPredicted RBP10.22□□□□□ -0.77
ACTN1-213ENST00000554508 FGD4Q96M96 766 aa10.22□□□□□ -0.77
ACTN1-213ENST00000554508 GDF15Q99988 308 aa10.22□□□□□ -0.77
ACTN1-213ENST00000554508 UBAC1Q9BSL1 405 aa10.22□□□□□ -0.77
ACTN1-213ENST00000554508 TSEN34Q9BSV6 310 aaKnown RBP10.22□□□□□ -0.77
ACTN1-213ENST00000554508 MAF1Q9H063 256 aa10.22□□□□□ -0.77
ACTN1-213ENST00000554508 CYP39A1Q9NYL5 469 aa10.22□□□□□ -0.77
ACTN1-213ENST00000554508 ADD3Q9UEY8 706 aaKnown RBP10.22□□□□□ -0.77
ACTN1-213ENST00000554508 ZHX1Q9UKY1 873 aaPredicted RBP10.22□□□□□ -0.77
ACTN1-213ENST00000554508 ZMYND8Q9ULU4 1186 aaPredicted RBP10.22□□□□□ -0.77
ACTN1-213ENST00000554508 WDR19Q8NEZ3 1342 aa10.22□□□□□ -0.77
ACTN1-213ENST00000554508 DUSP11O75319 330 aaKnown RBP10.21□□□□□ -0.77
ACTN1-213ENST00000554508 MYCNP04198 464 aaPredicted RBP10.21□□□□□ -0.77
ACTN1-213ENST00000554508 ADCYAP1R1P41586 468 aa10.21□□□□□ -0.77
ACTN1-213ENST00000554508 FXR1P51114 621 aaKnown RBP eCLIP10.21□□□□□ -0.77
ACTN1-213ENST00000554508 ATN1P54259 1190 aaPredicted RBP10.21□□□□□ -0.77
ACTN1-213ENST00000554508 RTP1P59025 263 aa10.21□□□□□ -0.77
ACTN1-213ENST00000554508 PTH1RQ03431 593 aa10.21□□□□□ -0.77
ACTN1-213ENST00000554508 CCDC144BQ3MJ40 725 aa10.21□□□□□ -0.77
ACTN1-213ENST00000554508 ASPRV1Q53RT3 343 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms