RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 JCADQ9P266 1359 aa5.93□□□□□ -1.46
ATXN3-227ENST00000554491 MYOCOSA0A1B0GUC4 107 aa5.93□□□□□ -1.46
ATXN3-227ENST00000554491 CHURC1-FNTBB4DL54 471 aa5.93□□□□□ -1.46
ATXN3-227ENST00000554491 NUAK1O60285 661 aa5.93□□□□□ -1.46
ATXN3-227ENST00000554491 RLBP1P12271 317 aa5.93□□□□□ -1.46
ATXN3-227ENST00000554491 GALK1P51570 392 aa5.93□□□□□ -1.46
ATXN3-227ENST00000554491 YARSP54577 528 aaKnown RBP5.93□□□□□ -1.46
ATXN3-227ENST00000554491 CAMK2GQ13555 558 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-227ENST00000554491 ZNF605Q86T29 641 aa5.93□□□□□ -1.46
ATXN3-227ENST00000554491 SLFN12Q8IYM2 578 aa5.93□□□□□ -1.46
ATXN3-227ENST00000554491 BAHD1Q8TBE0 780 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-227ENST00000554491 RNF141Q8WVD5 230 aa5.93□□□□□ -1.46
ATXN3-227ENST00000554491 MCOLN1Q9GZU1 580 aa5.93□□□□□ -1.46
ATXN3-227ENST00000554491 IRF2BPLQ9H1B7 796 aa5.93□□□□□ -1.46
ATXN3-227ENST00000554491 REV1Q9UBZ9 1251 aa5.93□□□□□ -1.46
ATXN3-227ENST00000554491 FITM1A5D6W6 292 aa5.92□□□□□ -1.46
ATXN3-227ENST00000554491 GRIN3BO60391 1043 aa5.92□□□□□ -1.46
ATXN3-227ENST00000554491 DNAJA2O60884 412 aa5.92□□□□□ -1.46
ATXN3-227ENST00000554491 BPNT1O95861 308 aa5.92□□□□□ -1.46
ATXN3-227ENST00000554491 PF4P02776 101 aa5.92□□□□□ -1.46
ATXN3-227ENST00000554491 TNNI2P48788 182 aa5.92□□□□□ -1.46
ATXN3-227ENST00000554491 ST13P50502 369 aaKnown RBP5.92□□□□□ -1.46
ATXN3-227ENST00000554491 DAB2P98082 770 aa5.92□□□□□ -1.46
ATXN3-227ENST00000554491 TEKQ02763 1124 aa5.92□□□□□ -1.46
ATXN3-227ENST00000554491 PSMD2Q13200 908 aa5.92□□□□□ -1.46
ATXN3-227ENST00000554491 ZNF772Q68DY9 489 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-227ENST00000554491 CCDC84Q86UT8 332 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-227ENST00000554491 LILRA2Q8N149 483 aa5.92□□□□□ -1.46
ATXN3-227ENST00000554491 OXR1Q8N573 874 aa5.92□□□□□ -1.46
ATXN3-227ENST00000554491 YTHDC1Q96MU7 727 aaKnown RBP5.92□□□□□ -1.46
ATXN3-227ENST00000554491 KREMEN1Q96MU8 473 aa5.92□□□□□ -1.46
ATXN3-227ENST00000554491 KLHL3Q9UH77 587 aa5.92□□□□□ -1.46
ATXN3-227ENST00000554491 YBX2Q9Y2T7 364 aaKnown RBP5.92□□□□□ -1.46
ATXN3-227ENST00000554491 POLR3KQ9Y2Y1 108 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-227ENST00000554491 NWD1Q149M9 1564 aa5.92□□□□□ -1.46
ATXN3-227ENST00000554491 KDM5AP29375 1690 aaKnown RBP5.91□□□□□ -1.46
ATXN3-227ENST00000554491 FGD6Q6ZV73 1430 aa5.91□□□□□ -1.46
ATXN3-227ENST00000554491 SCAF11Q99590 1463 aaKnown RBP5.91□□□□□ -1.46
ATXN3-227ENST00000554491 PRRG2O14669 202 aa5.91□□□□□ -1.46
ATXN3-227ENST00000554491 EFEMP2O95967 443 aa5.91□□□□□ -1.46
ATXN3-227ENST00000554491 DLG4P78352 724 aa5.91□□□□□ -1.46
ATXN3-227ENST00000554491 LMNB2Q03252 620 aa5.91□□□□□ -1.46
ATXN3-227ENST00000554491 NR0B2Q15466 257 aa5.91□□□□□ -1.46
ATXN3-227ENST00000554491 IRF2BP1Q8IU81 584 aa5.91□□□□□ -1.46
ATXN3-227ENST00000554491 IPO4Q8TEX9 1081 aaKnown RBP5.91□□□□□ -1.46
ATXN3-227ENST00000554491 GATAD2BQ8WXI9 593 aa5.91□□□□□ -1.46
ATXN3-227ENST00000554491 DHX38Q92620 1227 aaKnown RBP5.91□□□□□ -1.46
ATXN3-227ENST00000554491 SHISA4Q96DD7 197 aa5.91□□□□□ -1.46
ATXN3-227ENST00000554491 INTS4Q96HW7 963 aaKnown RBP5.91□□□□□ -1.46
ATXN3-227ENST00000554491 SGPP1Q9BX95 441 aa5.91□□□□□ -1.46
ATXN3-227ENST00000554491 SLC6A17Q9H1V8 727 aa5.91□□□□□ -1.46
ATXN3-227ENST00000554491 NAP1L2Q9ULW6 460 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-227ENST00000554491 CCDC9Q9Y3X0 531 aaKnown RBP5.91□□□□□ -1.46
ATXN3-227ENST00000554491 NCANO14594 1321 aa5.91□□□□□ -1.46
ATXN3-227ENST00000554491 PRR36Q9H6K5 1346 aa5.91□□□□□ -1.46
ATXN3-227ENST00000554491 AHDC1Q5TGY3 1603 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-227ENST00000554491 USP31Q70CQ4 1352 aa5.91□□□□□ -1.46
ATXN3-227ENST00000554491 NHSL1Q5SYE7 1610 aa5.9□□□□□ -1.46
ATXN3-227ENST00000554491 RBM47A0AV96 593 aaKnown RBP5.9□□□□□ -1.46
ATXN3-227ENST00000554491 NOTOA8MTQ0 251 aa5.9□□□□□ -1.46
ATXN3-227ENST00000554491 PSPNO60542 156 aa5.9□□□□□ -1.46
ATXN3-227ENST00000554491 HTR3BO95264 441 aa5.9□□□□□ -1.46
ATXN3-227ENST00000554491 TEX2Q8IWB9 1127 aa5.9□□□□□ -1.46
ATXN3-227ENST00000554491 RHOVQ96L33 236 aa5.9□□□□□ -1.46
ATXN3-227ENST00000554491 PUS7Q96PZ0 661 aaKnown RBP5.9□□□□□ -1.46
ATXN3-227ENST00000554491 G6PC3Q9BUM1 346 aa5.9□□□□□ -1.46
ATXN3-227ENST00000554491 TRAIPQ9BWF2 469 aa5.9□□□□□ -1.46
ATXN3-227ENST00000554491 GPR160Q9UJ42 338 aa5.9□□□□□ -1.46
ATXN3-227ENST00000554491 NKTRP30414 1462 aaKnown RBP5.9□□□□□ -1.47
ATXN3-227ENST00000554491 DIP2AQ14689 1571 aa5.89□□□□□ -1.47
ATXN3-227ENST00000554491 B8ZZF3 427 aa5.89□□□□□ -1.47
ATXN3-227ENST00000554491 PDE6BP35913 854 aa5.89□□□□□ -1.47
ATXN3-227ENST00000554491 BUD31P41223 144 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-227ENST00000554491 FAM160A1Q05DH4 1040 aa5.89□□□□□ -1.47
ATXN3-227ENST00000554491 TMC4Q7Z404 712 aa5.89□□□□□ -1.47
ATXN3-227ENST00000554491 TICAM2Q86XR7 235 aa5.89□□□□□ -1.47
ATXN3-227ENST00000554491 FBXO27Q8NI29 283 aa5.89□□□□□ -1.47
ATXN3-227ENST00000554491 LINC01599Q8WXQ3 324 aa5.89□□□□□ -1.47
ATXN3-227ENST00000554491 CCDC74BQ96LY2 380 aa5.89□□□□□ -1.47
ATXN3-227ENST00000554491 KIF2CQ99661 725 aa5.89□□□□□ -1.47
ATXN3-227ENST00000554491 POLR3GLQ9BT43 218 aa5.89□□□□□ -1.47
ATXN3-227ENST00000554491 ASPNQ9BXN1 380 aa5.89□□□□□ -1.47
ATXN3-227ENST00000554491 CWC22Q9HCG8 908 aaKnown RBP5.89□□□□□ -1.47
ATXN3-227ENST00000554491 GCM1Q9NP62 436 aa5.89□□□□□ -1.47
ATXN3-227ENST00000554491 RAPGEFL1Q9UHV5 662 aa5.89□□□□□ -1.47
ATXN3-227ENST00000554491 SPATA31A6Q5VVP1 1343 aa5.89□□□□□ -1.47
ATXN3-227ENST00000554491 MIA2Q96PC5 1412 aa5.89□□□□□ -1.47
ATXN3-227ENST00000554491 ABCC3O15438 1527 aa5.89□□□□□ -1.47
ATXN3-227ENST00000554491 SLIT1O75093 1534 aa5.89□□□□□ -1.47
ATXN3-227ENST00000554491 PRDM15P57071 1507 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-227ENST00000554491 PEX10O60683 326 aa5.88□□□□□ -1.47
ATXN3-227ENST00000554491 HOXA5P20719 270 aa5.88□□□□□ -1.47
ATXN3-227ENST00000554491 GBP2P32456 591 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-227ENST00000554491 CLEC16AQ2KHT3 1053 aa5.88□□□□□ -1.47
ATXN3-227ENST00000554491 LCE5AQ5TCM9 118 aa5.88□□□□□ -1.47
ATXN3-227ENST00000554491 MEX3CQ5U5Q3 659 aaKnown RBP5.88□□□□□ -1.47
ATXN3-227ENST00000554491 GGT6Q6P531 493 aa5.88□□□□□ -1.47
ATXN3-227ENST00000554491 SND1Q7KZF4 910 aaKnown RBP eCLIP5.88□□□□□ -1.47
ATXN3-227ENST00000554491 SPPL2CQ8IUH8 684 aa5.88□□□□□ -1.47
ATXN3-227ENST00000554491 SIRT2Q8IXJ6 389 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms