RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 SLC1A4P43007 532 aa12.29□□□□□ -0.44
PTCD2P1-201ENST00000554393 IRX6P78412 446 aaPredicted RBP12.29□□□□□ -0.44
PTCD2P1-201ENST00000554393 AKNAD1Q5T1N1 836 aa12.29□□□□□ -0.44
PTCD2P1-201ENST00000554393 TTC22Q5TAA0 569 aa12.29□□□□□ -0.44
PTCD2P1-201ENST00000554393 ASTLQ6HA08 431 aaPredicted RBP12.29□□□□□ -0.44
PTCD2P1-201ENST00000554393 SNRNP48Q6IEG0 339 aaKnown RBP12.29□□□□□ -0.44
PTCD2P1-201ENST00000554393 CHURC1Q8WUH1 139 aa12.29□□□□□ -0.44
PTCD2P1-201ENST00000554393 DPF3Q92784 378 aa12.29□□□□□ -0.44
PTCD2P1-201ENST00000554393 KIFC2Q96AC6 838 aa12.29□□□□□ -0.44
PTCD2P1-201ENST00000554393 MAML3Q96JK9 1138 aa12.29□□□□□ -0.44
PTCD2P1-201ENST00000554393 DCBLD2Q96PD2 775 aa12.29□□□□□ -0.44
PTCD2P1-201ENST00000554393 COL25A1Q9BXS0 654 aaPredicted RBP12.29□□□□□ -0.44
PTCD2P1-201ENST00000554393 INCENPQ9NQS7 918 aa12.29□□□□□ -0.44
PTCD2P1-201ENST00000554393 FBXO40Q9UH90 709 aa12.29□□□□□ -0.44
PTCD2P1-201ENST00000554393 DDX20Q9UHI6 824 aaKnown RBP12.29□□□□□ -0.44
PTCD2P1-201ENST00000554393 NRBP1Q9UHY1 535 aa12.29□□□□□ -0.44
PTCD2P1-201ENST00000554393 CTDP1Q9Y5B0 961 aaPredicted RBP12.29□□□□□ -0.44
PTCD2P1-201ENST00000554393 STK24Q9Y6E0 443 aa12.29□□□□□ -0.44
PTCD2P1-201ENST00000554393 RAD50Q92878 1312 aa12.29□□□□□ -0.44
PTCD2P1-201ENST00000554393 VCANP13611 3396 aa12.29□□□□□ -0.44
PTCD2P1-201ENST00000554393 SPTBN5Q9NRC6 3674 aaKnown RBP12.29□□□□□ -0.44
PTCD2P1-201ENST00000554393 TMEM232C9JQI7 657 aa12.28□□□□□ -0.44
PTCD2P1-201ENST00000554393 H0YGN5 161 aa12.28□□□□□ -0.44
PTCD2P1-201ENST00000554393 NMT2O60551 498 aa12.28□□□□□ -0.44
PTCD2P1-201ENST00000554393 TOP1P11387 765 aaKnown RBP12.28□□□□□ -0.44
PTCD2P1-201ENST00000554393 COL6A1P12109 1028 aa12.28□□□□□ -0.44
PTCD2P1-201ENST00000554393 GSPT1P15170 499 aaKnown RBP12.28□□□□□ -0.44
PTCD2P1-201ENST00000554393 ZNF792Q3KQV3 632 aa12.28□□□□□ -0.44
PTCD2P1-201ENST00000554393 RCSD1Q6JBY9 416 aa12.28□□□□□ -0.44
PTCD2P1-201ENST00000554393 MFSD6Q6ZSS7 791 aa12.28□□□□□ -0.44
PTCD2P1-201ENST00000554393 MSL3Q8N5Y2 521 aaKnown RBP12.28□□□□□ -0.44
PTCD2P1-201ENST00000554393 CHST13Q8NET6 341 aa12.28□□□□□ -0.44
PTCD2P1-201ENST00000554393 DIS3LQ8TF46 1054 aaKnown RBP12.28□□□□□ -0.44
PTCD2P1-201ENST00000554393 DCAF4Q8WV16 495 aa12.28□□□□□ -0.44
PTCD2P1-201ENST00000554393 TTC14Q96N46 770 aa12.28□□□□□ -0.44
PTCD2P1-201ENST00000554393 C11orf49Q9H6J7 331 aa12.28□□□□□ -0.44
PTCD2P1-201ENST00000554393 TOMM22Q9NS69 142 aa12.28□□□□□ -0.44
PTCD2P1-201ENST00000554393 SMCHD1A6NHR9 2005 aa12.28□□□□□ -0.44
PTCD2P1-201ENST00000554393 MCM3APO60318 1980 aa12.27□□□□□ -0.44
PTCD2P1-201ENST00000554393 DNAJC25-GNG10A0A024R161 153 aa12.27□□□□□ -0.45
PTCD2P1-201ENST00000554393 ZNF213O14771 459 aa12.27□□□□□ -0.45
PTCD2P1-201ENST00000554393 SEPT4O43236 478 aa12.27□□□□□ -0.45
PTCD2P1-201ENST00000554393 EVI5O60447 810 aa12.27□□□□□ -0.45
PTCD2P1-201ENST00000554393 MCCP23508 829 aa12.27□□□□□ -0.45
PTCD2P1-201ENST00000554393 HAND2P61296 217 aa12.27□□□□□ -0.45
PTCD2P1-201ENST00000554393 RRP12Q5JTH9 1297 aaKnown RBP12.27□□□□□ -0.45
PTCD2P1-201ENST00000554393 TBC1D10CQ8IV04 446 aa12.27□□□□□ -0.45
PTCD2P1-201ENST00000554393 TRPV1Q8NER1 839 aa12.27□□□□□ -0.45
PTCD2P1-201ENST00000554393 ESR2Q92731 530 aa12.27□□□□□ -0.45
PTCD2P1-201ENST00000554393 CTNNA3Q9UI47 895 aa12.27□□□□□ -0.45
PTCD2P1-201ENST00000554393 ATMINO43313 823 aaPredicted RBP12.26□□□□□ -0.45
PTCD2P1-201ENST00000554393 PGK2P07205 417 aa12.26□□□□□ -0.45
PTCD2P1-201ENST00000554393 CNGA1P29973 690 aa12.26□□□□□ -0.45
PTCD2P1-201ENST00000554393 IKQ13123 557 aaPredicted RBP12.26□□□□□ -0.45
PTCD2P1-201ENST00000554393 TKFCQ3LXA3 575 aa12.26□□□□□ -0.45
PTCD2P1-201ENST00000554393 CCDC178Q5BJE1 867 aa12.26□□□□□ -0.45
PTCD2P1-201ENST00000554393 CPXCR1Q8N123 301 aa12.26□□□□□ -0.45
PTCD2P1-201ENST00000554393 DDX11Q96FC9 970 aa12.26□□□□□ -0.45
PTCD2P1-201ENST00000554393 TMEM47Q9BQJ4 181 aa12.26□□□□□ -0.45
PTCD2P1-201ENST00000554393 TINF2Q9BSI4 451 aa12.26□□□□□ -0.45
PTCD2P1-201ENST00000554393 RAVER2Q9HCJ3 691 aaKnown RBP12.26□□□□□ -0.45
PTCD2P1-201ENST00000554393 RBM27Q9P2N5 1060 aaKnown RBP12.26□□□□□ -0.45
PTCD2P1-201ENST00000554393 RIPK3Q9Y572 518 aa12.26□□□□□ -0.45
PTCD2P1-201ENST00000554393 SYNGAP1Q96PV0 1343 aa12.26□□□□□ -0.45
PTCD2P1-201ENST00000554393 LAMA3Q16787 3333 aa12.25□□□□□ -0.45
PTCD2P1-201ENST00000554393 DNM1LO00429 736 aa12.25□□□□□ -0.45
PTCD2P1-201ENST00000554393 IMMTQ16891 758 aaKnown RBP12.25□□□□□ -0.45
PTCD2P1-201ENST00000554393 MAMDC4Q6UXC1 1216 aa12.25□□□□□ -0.45
PTCD2P1-201ENST00000554393 BTNL9Q6UXG8 535 aa12.25□□□□□ -0.45
PTCD2P1-201ENST00000554393 KCTD1Q719H9 257 aa12.25□□□□□ -0.45
PTCD2P1-201ENST00000554393 IQCA1Q86XH1 822 aa12.25□□□□□ -0.45
PTCD2P1-201ENST00000554393 DGKHQ86XP1 1220 aa12.25□□□□□ -0.45
PTCD2P1-201ENST00000554393 RUFY2Q8WXA3 655 aa12.25□□□□□ -0.45
PTCD2P1-201ENST00000554393 PRR12Q9ULL5 1215 aa12.25□□□□□ -0.45
PTCD2P1-201ENST00000554393 ISY1Q9ULR0 285 aaKnown RBP12.25□□□□□ -0.45
PTCD2P1-201ENST00000554393 PFASO15067 1338 aa12.25□□□□□ -0.45
PTCD2P1-201ENST00000554393 ZNF536O15090 1300 aa12.25□□□□□ -0.45
PTCD2P1-201ENST00000554393 NEDD4P46934 1319 aa12.25□□□□□ -0.45
PTCD2P1-201ENST00000554393 LCTP09848 1927 aa12.25□□□□□ -0.45
PTCD2P1-201ENST00000554393 MYH6P13533 1939 aa12.25□□□□□ -0.45
PTCD2P1-201ENST00000554393 LRRC37A2A6NM11 1700 aa12.24□□□□□ -0.45
PTCD2P1-201ENST00000554393 SNHG28P0DPA3 235 aa12.24□□□□□ -0.45
PTCD2P1-201ENST00000554393 PDHBP11177 359 aa12.24□□□□□ -0.45
PTCD2P1-201ENST00000554393 CCDC96Q2M329 555 aa12.24□□□□□ -0.45
PTCD2P1-201ENST00000554393 ANKRD35Q8N283 1001 aa12.24□□□□□ -0.45
PTCD2P1-201ENST00000554393 ARRDC4Q8NCT1 418 aa12.24□□□□□ -0.45
PTCD2P1-201ENST00000554393 RANBP17Q9H2T7 1088 aaKnown RBP12.24□□□□□ -0.45
PTCD2P1-201ENST00000554393 ACAD9Q9H845 621 aa12.24□□□□□ -0.45
PTCD2P1-201ENST00000554393 CNNM2Q9H8M5 875 aa12.24□□□□□ -0.45
PTCD2P1-201ENST00000554393 PNMA2Q9UL42 364 aa12.24□□□□□ -0.45
PTCD2P1-201ENST00000554393 CHMLP26374 656 aa12.23□□□□□ -0.45
PTCD2P1-201ENST00000554393 ATN1P54259 1190 aaPredicted RBP12.23□□□□□ -0.45
PTCD2P1-201ENST00000554393 RASGRP2Q7LDG7 609 aa12.23□□□□□ -0.45
PTCD2P1-201ENST00000554393 BBXQ8WY36 941 aaPredicted RBP12.23□□□□□ -0.45
PTCD2P1-201ENST00000554393 ANKS1AQ92625 1134 aa12.23□□□□□ -0.45
PTCD2P1-201ENST00000554393 KRT23Q9C075 422 aa12.23□□□□□ -0.45
PTCD2P1-201ENST00000554393 IL25Q9H293 177 aa12.23□□□□□ -0.45
PTCD2P1-201ENST00000554393 RNF146Q9NTX7 359 aa12.23□□□□□ -0.45
PTCD2P1-201ENST00000554393 CNPY2Q9Y2B0 182 aa12.23□□□□□ -0.45
PTCD2P1-201ENST00000554393 KDM4AO75164 1064 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms