RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 SCAND2PQ9GZW5 306 aaPredicted RBP8.79□□□□□ -1
TDP1-209ENST00000554180 RPAP3Q9H6T3 665 aaPredicted RBP8.79□□□□□ -1
TDP1-209ENST00000554180 CFAP45Q9UL16 551 aa8.79□□□□□ -1
TDP1-209ENST00000554180 PPP1R9AQ9ULJ8 1098 aa8.79□□□□□ -1
TDP1-209ENST00000554180 KCNJ14Q9UNX9 436 aa8.79□□□□□ -1
TDP1-209ENST00000554180 PCDHA1Q9Y5I3 950 aa8.79□□□□□ -1
TDP1-209ENST00000554180 PHIPQ8WWQ0 1821 aa8.79□□□□□ -1
TDP1-209ENST00000554180 PASKQ96RG2 1323 aa8.79□□□□□ -1
TDP1-209ENST00000554180 MYH6P13533 1939 aa8.78□□□□□ -1
TDP1-209ENST00000554180 BTBD18B2RXH4 712 aa8.78□□□□□ -1
TDP1-209ENST00000554180 USP17L15C9J2P7 530 aa8.78□□□□□ -1
TDP1-209ENST00000554180 USP17L13C9JLJ4 530 aa8.78□□□□□ -1
TDP1-209ENST00000554180 USP17L11C9JVI0 530 aa8.78□□□□□ -1
TDP1-209ENST00000554180 USP17L18D6R9N7 530 aa8.78□□□□□ -1
TDP1-209ENST00000554180 USP17L22D6RA61 530 aa8.78□□□□□ -1
TDP1-209ENST00000554180 USP17L17D6RBQ6 530 aa8.78□□□□□ -1
TDP1-209ENST00000554180 USP17L19D6RCP7 530 aa8.78□□□□□ -1
TDP1-209ENST00000554180 USP17L20D6RJB6 530 aa8.78□□□□□ -1
TDP1-209ENST00000554180 PPP1R11O60927 126 aaPredicted RBP8.78□□□□□ -1
TDP1-209ENST00000554180 FLOT1O75955 427 aa8.78□□□□□ -1
TDP1-209ENST00000554180 ZBTB48P10074 688 aaPredicted RBP8.78□□□□□ -1
TDP1-209ENST00000554180 HOXA7P31268 230 aaPredicted RBP8.78□□□□□ -1
TDP1-209ENST00000554180 TRAPPC10P48553 1259 aa8.78□□□□□ -1
TDP1-209ENST00000554180 ADCY7P51828 1080 aa8.78□□□□□ -1
TDP1-209ENST00000554180 OAZ1P54368 228 aa8.78□□□□□ -1
TDP1-209ENST00000554180 DNM1Q05193 864 aaKnown RBP8.78□□□□□ -1
TDP1-209ENST00000554180 USP17L24Q0WX57 530 aa8.78□□□□□ -1
TDP1-209ENST00000554180 SNAPC2Q13487 334 aa8.78□□□□□ -1
TDP1-209ENST00000554180 NFKBIBQ15653 356 aa8.78□□□□□ -1
TDP1-209ENST00000554180 RILPL1Q5EBL4 403 aa8.78□□□□□ -1
TDP1-209ENST00000554180 MOB2Q70IA6 237 aa8.78□□□□□ -1
TDP1-209ENST00000554180 FASTKD5Q7L8L6 764 aaKnown RBP8.78□□□□□ -1
TDP1-209ENST00000554180 BLIDQ8IZY5 108 aa8.78□□□□□ -1
TDP1-209ENST00000554180 REXO1Q8N1G1 1221 aaKnown RBP8.78□□□□□ -1
TDP1-209ENST00000554180 SMC1BQ8NDV3 1235 aa8.78□□□□□ -1
TDP1-209ENST00000554180 TNFRSF25Q93038 417 aa8.78□□□□□ -1
TDP1-209ENST00000554180 OPTNQ96CV9 577 aa8.78□□□□□ -1
TDP1-209ENST00000554180 SLC10A4Q96EP9 437 aa8.78□□□□□ -1
TDP1-209ENST00000554180 ZNF408Q9H9D4 720 aa8.78□□□□□ -1
TDP1-209ENST00000554180 RIC8AQ9NPQ8 531 aa8.78□□□□□ -1
TDP1-209ENST00000554180 POLR3EQ9NVU0 708 aa8.78□□□□□ -1
TDP1-209ENST00000554180 ELP1O95163 1332 aa8.78□□□□□ -1
TDP1-209ENST00000554180 LOC285556D6RIA3 1793 aa8.77□□□□□ -1.01
TDP1-209ENST00000554180 SMCO2A6NFE2 343 aa8.77□□□□□ -1.01
TDP1-209ENST00000554180 M0R2N6 131 aa8.77□□□□□ -1.01
TDP1-209ENST00000554180 KIF3CO14782 793 aa8.77□□□□□ -1.01
TDP1-209ENST00000554180 ATP2A1O14983 1001 aa8.77□□□□□ -1.01
TDP1-209ENST00000554180 ICAM1P05362 532 aa8.77□□□□□ -1.01
TDP1-209ENST00000554180 DSG3P32926 999 aa8.77□□□□□ -1.01
TDP1-209ENST00000554180 NASPP49321 788 aaPredicted RBP8.77□□□□□ -1.01
TDP1-209ENST00000554180 MRPL12P52815 198 aaKnown RBP8.77□□□□□ -1.01
TDP1-209ENST00000554180 NR5A1Q13285 461 aa8.77□□□□□ -1.01
TDP1-209ENST00000554180 PABPC4Q13310 644 aaKnown RBP eCLIP8.77□□□□□ -1.01
TDP1-209ENST00000554180 COG2Q14746 738 aa8.77□□□□□ -1.01
TDP1-209ENST00000554180 LBX2Q6XYB7 198 aa8.77□□□□□ -1.01
TDP1-209ENST00000554180 CATSPERGQ6ZRH7 1159 aa8.77□□□□□ -1.01
TDP1-209ENST00000554180 KRT25Q7Z3Z0 450 aa8.77□□□□□ -1.01
TDP1-209ENST00000554180 MB21D1Q8N884 522 aa8.77□□□□□ -1.01
TDP1-209ENST00000554180 OXER1Q8TDS5 423 aa8.77□□□□□ -1.01
TDP1-209ENST00000554180 CNKSR2Q8WXI2 1034 aa8.77□□□□□ -1.01
TDP1-209ENST00000554180 CUL5Q93034 780 aa8.77□□□□□ -1.01
TDP1-209ENST00000554180 COA7Q96BR5 231 aa8.77□□□□□ -1.01
TDP1-209ENST00000554180 MAF1Q9H063 256 aa8.77□□□□□ -1.01
TDP1-209ENST00000554180 SLC38A10Q9HBR0 1119 aa8.77□□□□□ -1.01
TDP1-209ENST00000554180 FBXO28Q9NVF7 368 aa8.77□□□□□ -1.01
TDP1-209ENST00000554180 HOXC10Q9NYD6 342 aa8.77□□□□□ -1.01
TDP1-209ENST00000554180 NOL7Q9UMY1 257 aaKnown RBP8.77□□□□□ -1.01
TDP1-209ENST00000554180 ADAMTS5Q9UNA0 930 aa8.77□□□□□ -1.01
TDP1-209ENST00000554180 AGTPBP1Q9UPW5 1226 aa8.77□□□□□ -1.01
TDP1-209ENST00000554180 MORC2Q9Y6X9 1032 aaPredicted RBP8.77□□□□□ -1.01
TDP1-209ENST00000554180 ABCB11O95342 1321 aa8.77□□□□□ -1.01
TDP1-209ENST00000554180 CCDC194A0A1B0GVG4 234 aa8.76□□□□□ -1.01
TDP1-209ENST00000554180 PIK3CDO00329 1044 aa8.76□□□□□ -1.01
TDP1-209ENST00000554180 VWA5AO00534 786 aa8.76□□□□□ -1.01
TDP1-209ENST00000554180 ZBED4O75132 1171 aa8.76□□□□□ -1.01
TDP1-209ENST00000554180 YEATS4O95619 227 aa8.76□□□□□ -1.01
TDP1-209ENST00000554180 BMP15O95972 392 aa8.76□□□□□ -1.01
TDP1-209ENST00000554180 CETPP11597 493 aa8.76□□□□□ -1.01
TDP1-209ENST00000554180 NCLP19338 710 aaKnown RBP8.76□□□□□ -1.01
TDP1-209ENST00000554180 GTF2A2P52657 109 aa8.76□□□□□ -1.01
TDP1-209ENST00000554180 FMR1Q06787 632 aaKnown RBP eCLIP8.76□□□□□ -1.01
TDP1-209ENST00000554180 AP3B2Q13367 1082 aa8.76□□□□□ -1.01
TDP1-209ENST00000554180 ORC2Q13416 577 aaPredicted RBP8.76□□□□□ -1.01
TDP1-209ENST00000554180 DGKZQ13574 1117 aa8.76□□□□□ -1.01
TDP1-209ENST00000554180 CST9Q5W186 159 aa8.76□□□□□ -1.01
TDP1-209ENST00000554180 SAMD3Q8N6K7 520 aa8.76□□□□□ -1.01
TDP1-209ENST00000554180 WNK4Q96J92 1243 aa8.76□□□□□ -1.01
TDP1-209ENST00000554180 SPATA32Q96LK8 384 aa8.76□□□□□ -1.01
TDP1-209ENST00000554180 PSTPIP2Q9H939 334 aa8.76□□□□□ -1.01
TDP1-209ENST00000554180 RTEL1Q9NZ71 1219 aa8.76□□□□□ -1.01
TDP1-209ENST00000554180 PCDHA6Q9UN73 950 aa8.76□□□□□ -1.01
TDP1-209ENST00000554180 CNPY2Q9Y2B0 182 aa8.76□□□□□ -1.01
TDP1-209ENST00000554180 SLC45A1Q9Y2W3 748 aa8.76□□□□□ -1.01
TDP1-209ENST00000554180 MRPL11Q9Y3B7 192 aaKnown RBP8.76□□□□□ -1.01
TDP1-209ENST00000554180 CTDP1Q9Y5B0 961 aaPredicted RBP8.76□□□□□ -1.01
TDP1-209ENST00000554180 PCDHA8Q9Y5H6 950 aa8.76□□□□□ -1.01
TDP1-209ENST00000554180 ZNF536O15090 1300 aa8.76□□□□□ -1.01
TDP1-209ENST00000554180 PTPRFP10586 1907 aa8.76□□□□□ -1.01
TDP1-209ENST00000554180 SPDYE16A6NNV3 312 aaPredicted RBP8.75□□□□□ -1.01
TDP1-209ENST00000554180 FIBPO43427 364 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms