RNA–Protein interactions for RNA: ENST00000554171.1

LRFN5-204, Transcript of leucine rich repeat and fibronectin type III domain containing 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRFN5, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN5-204ENST00000554171 MAP3K19Q56UN5 1328 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 ATXN2Q99700 1313 aaKnown RBP4.37□□□□□ -1.71
LRFN5-204ENST00000554171 CPLX1O14810 134 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 MAP3K13O43283 966 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 SLITRK3O94933 977 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 RPSAP08865 295 aaKnown RBP4.37□□□□□ -1.71
LRFN5-204ENST00000554171 KIF5BP33176 963 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 SNX16P57768 344 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 ST5P78524 1137 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 EXOSC10Q01780 885 aaKnown RBP4.37□□□□□ -1.71
LRFN5-204ENST00000554171 SARM1Q6SZW1 724 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 HHIPL2Q6UWX4 724 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 KSR2Q6VAB6 950 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.37□□□□□ -1.71
LRFN5-204ENST00000554171 PGBD3Q8N328 593 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 IPMKQ8NFU5 416 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 GDAP1Q8TB36 358 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 AZIN2Q96A70 460 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 COG3Q96JB2 828 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 FNBP1Q96RU3 617 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 ZWILCHQ9H900 591 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 CYLDQ9NQC7 956 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 PPP1R1BQ9UD71 204 aaPredicted RBP4.37□□□□□ -1.71
LRFN5-204ENST00000554171 MKL2Q9ULH7 1088 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 SH3TC1Q8TE82 1336 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 PI4K2BG5E9Z4 385 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 GOLGA6L22H0YM25 854 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 ELL2O00472 640 aaPredicted RBP4.37□□□□□ -1.71
LRFN5-204ENST00000554171 KDM1AO60341 852 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 LINGO3P0C6S8 592 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 CTRB1P17538 263 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 PSMA4P25789 261 aaKnown RBP4.37□□□□□ -1.71
LRFN5-204ENST00000554171 ZNF445P59923 1031 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 BBS9Q3SYG4 887 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 KRBOX4Q5JUW0 171 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 FAM26DQ5JW98 314 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 ZNF772Q68DY9 489 aaPredicted RBP4.37□□□□□ -1.71
LRFN5-204ENST00000554171 CTRB2Q6GPI1 263 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 THOC7Q6I9Y2 204 aaKnown RBP4.37□□□□□ -1.71
LRFN5-204ENST00000554171 BNC2Q6ZN30 1099 aaPredicted RBP4.37□□□□□ -1.71
LRFN5-204ENST00000554171 IL17RDQ8NFM7 739 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 OR6C4Q8NGE1 309 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 SMARCE1Q969G3 411 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 ARL8AQ96BM9 186 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 ZNF594Q96JF6 807 aaPredicted RBP4.37□□□□□ -1.71
LRFN5-204ENST00000554171 GORASP1Q9BQQ3 440 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 PUS3Q9BZE2 481 aaKnown RBP4.37□□□□□ -1.71
LRFN5-204ENST00000554171 UBE2OQ9C0C9 1292 aaKnown RBP4.37□□□□□ -1.71
LRFN5-204ENST00000554171 PDRG1Q9NUG6 133 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 C9orf78Q9NZ63 289 aaPredicted RBP4.37□□□□□ -1.71
LRFN5-204ENST00000554171 GTF2IRD1Q9UHL9 959 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 HPS5Q9UPZ3 1129 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 FARP1Q9Y4F1 1045 aaPredicted RBP4.37□□□□□ -1.71
LRFN5-204ENST00000554171 CDC42BPAQ5VT25 1732 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 TOP2AP11388 1531 aaKnown RBP4.37□□□□□ -1.71
LRFN5-204ENST00000554171 PPRC1Q5VV67 1664 aaKnown RBP4.37□□□□□ -1.71
LRFN5-204ENST00000554171 CARMIL1Q5VZK9 1371 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 FAM221BA6H8Z2 402 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 PALM3A6NDB9 673 aaPredicted RBP4.37□□□□□ -1.71
LRFN5-204ENST00000554171 KIF3BO15066 747 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 CAPNS1P04632 268 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 RPL9P32969 192 aaKnown RBP4.37□□□□□ -1.71
LRFN5-204ENST00000554171 MARSP56192 900 aaKnown RBP4.37□□□□□ -1.71
LRFN5-204ENST00000554171 NKX3-2P78367 333 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 FBXO43Q4G163 708 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 FKBP15Q5T1M5 1219 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 C3orf67Q6ZVT6 689 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 MCF2L2Q86YR7 1114 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 CCDC116Q8IYX3 515 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 ZNF540Q8NDQ6 660 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 TRIM58Q8NG06 486 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 DEPTORQ8TB45 409 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 SPATA18Q8TC71 538 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 NLRP7Q8WX94 980 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 GLMNQ92990 594 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 NAP1L4Q99733 375 aaKnown RBP4.37□□□□□ -1.71
LRFN5-204ENST00000554171 PCMTD2Q9NV79 361 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 PDP2Q9P2J9 529 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 HDAC9Q9UKV0 1011 aa4.37□□□□□ -1.71
LRFN5-204ENST00000554171 ROCK2O75116 1388 aaKnown RBP4.36□□□□□ -1.71
LRFN5-204ENST00000554171 FAM83GA6ND36 823 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 H0Y626 953 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 TRIM77I1YAP6 450 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 SNX2O60749 519 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 KATNA1O75449 491 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 KIF11P52732 1056 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 GPX6P59796 221 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 FAM160A1Q05DH4 1040 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 GTDC1Q4AE62 458 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 SLC2A7Q6PXP3 512 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 BRINP3Q76B58 766 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 MAATS1Q7Z4T9 603 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 ZER1Q7Z7L7 766 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 TRIML2Q8N7C3 387 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 SLC47A1Q96FL8 570 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 MRFAP1L1Q96HT8 127 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 GRIP2Q9C0E4 1043 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 GLT8D2Q9H1C3 349 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 PARVGQ9HBI0 331 aa4.36□□□□□ -1.71
LRFN5-204ENST00000554171 SLC39A2Q9NP94 309 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms