RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 CALM2P0DP24 149 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 CALM3P0DP25 149 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 CYP2C9P11712 490 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 RFX1P22670 979 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 KIF5BP33176 963 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 ADD2P35612 726 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 VASPP50552 380 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-205ENST00000554081 RHBDL3P58872 404 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 BAATQ14032 418 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-205ENST00000554081 WTAPQ15007 396 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 LDLRAD1Q5T700 205 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 SLC30A10Q6XR72 485 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 ZBTB33Q86T24 672 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 ZNF589Q86UQ0 364 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-205ENST00000554081 TEX2Q8IWB9 1127 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 CUL5Q93034 780 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 TEPSINQ96N21 525 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 TRERF1Q96PN7 1200 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 MOV10L1Q9BXT6 1211 aaKnown RBP2.91□□□□□ -1.94
PRPF39-205ENST00000554081 SPATC1LQ9H0A9 340 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.91□□□□□ -1.94
PRPF39-205ENST00000554081 SUGCTQ9HAC7 445 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 UPF2Q9HAU5 1272 aaKnown RBP2.91□□□□□ -1.94
PRPF39-205ENST00000554081 AGTPBP1Q9UPW5 1226 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 PPP2R3BQ9Y5P8 575 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 F5P12259 2224 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 GOLGA4Q13439 2230 aaKnown RBP2.91□□□□□ -1.94
PRPF39-205ENST00000554081 FAM208AQ9UK61 1670 aaKnown RBP2.91□□□□□ -1.94
PRPF39-205ENST00000554081 DCDC2CA8MYV0 355 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 FAM155AB1AL88 458 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-205ENST00000554081 TTLL1O95922 423 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 PARP1P09874 1014 aaKnown RBP2.91□□□□□ -1.94
PRPF39-205ENST00000554081 GCLCP48506 637 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-205ENST00000554081 PSMC6P62333 389 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 TLE2Q04725 743 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 JAKMIP3Q5VZ66 844 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 CTR9Q6PD62 1173 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 CATIPQ7Z7H3 387 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 RNF180Q86T96 592 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 DEFB123Q8N688 67 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 VGLL2Q8N8G2 317 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 PRPF38AQ8NAV1 312 aaKnown RBP2.91□□□□□ -1.94
PRPF39-205ENST00000554081 PNMA1Q8ND90 353 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 EVI5LQ96CN4 794 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 SCLYQ96I15 445 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 JAKMIP1Q96N16 626 aaKnown RBP2.91□□□□□ -1.94
PRPF39-205ENST00000554081 SLF1Q9BQI6 1058 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 APOL5Q9BWW9 433 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 EMILIN3Q9NT22 766 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 SLC12A7Q9Y666 1083 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 TOGARAM1Q9Y4F4 1720 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 CNTRLQ7Z7A1 2325 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 SCN9AQ15858 1988 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 KNTC1P50748 2209 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 UTYO14607 1347 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 A0A087WWV3 80 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 GRXCR1A8MXD5 290 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 C19orf81C9J6K1 198 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 PATL2C9JE40 543 aaKnown RBP2.91□□□□□ -1.94
PRPF39-205ENST00000554081 HMGCRP04035 888 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 TXNP10599 105 aaKnown RBP2.91□□□□□ -1.94
PRPF39-205ENST00000554081 CHRM1P11229 460 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-205ENST00000554081 ATP5JP18859 108 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 NCLP19338 710 aaKnown RBP2.91□□□□□ -1.94
PRPF39-205ENST00000554081 HDLBPQ00341 1268 aaKnown RBP2.91□□□□□ -1.94
PRPF39-205ENST00000554081 CEBPZQ03701 1054 aaKnown RBP2.91□□□□□ -1.94
PRPF39-205ENST00000554081 CACNB2Q08289 660 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-205ENST00000554081 CLUL1Q15846 466 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 Q6ZNB5 142 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 TMCO2Q7Z6W1 182 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-205ENST00000554081 CREBRFQ8IUR6 639 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 TRIB2Q92519 343 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 TBC1D5Q92609 795 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 COPS5Q92905 334 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 GPKOWQ92917 476 aaPredicted RBP eCLIP2.91□□□□□ -1.943e-6■■■■□ 23.6
PRPF39-205ENST00000554081 MS4A4AQ96JQ5 239 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 RNPC3Q96LT9 517 aaKnown RBP2.91□□□□□ -1.94
PRPF39-205ENST00000554081 CCDC17Q96LX7 622 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 STRBPQ96SI9 672 aaKnown RBP2.91□□□□□ -1.94
PRPF39-205ENST00000554081 GBP3Q9H0R5 595 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 RNF41Q9H4P4 317 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-205ENST00000554081 IGFLR1Q9H665 355 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 PRDM16Q9HAZ2 1276 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 ATP8A2Q9NTI2 1148 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 BTBD7Q9P203 1132 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 RIPK3Q9Y572 518 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 PCDHA1Q9Y5I3 950 aa2.91□□□□□ -1.94
PRPF39-205ENST00000554081 RIC1Q4ADV7 1423 aa2.9□□□□□ -1.94
PRPF39-205ENST00000554081 FAM186AA6NE01 2351 aa2.9□□□□□ -1.94
PRPF39-205ENST00000554081 GPR179Q6PRD1 2367 aa2.9□□□□□ -1.94
PRPF39-205ENST00000554081 PITPNM2Q9BZ72 1349 aa2.9□□□□□ -1.94
PRPF39-205ENST00000554081 SPDYE3A6NKU9 549 aa2.9□□□□□ -1.94
PRPF39-205ENST00000554081 KLRF2D3W0D1 207 aa2.9□□□□□ -1.94
PRPF39-205ENST00000554081 SGPL1O95470 568 aa2.9□□□□□ -1.94
PRPF39-205ENST00000554081 GJB1P08034 283 aa2.9□□□□□ -1.94
PRPF39-205ENST00000554081 ZFYP08048 801 aaPredicted RBP2.9□□□□□ -1.94
PRPF39-205ENST00000554081 SDSP20132 328 aa2.9□□□□□ -1.94
PRPF39-205ENST00000554081 MAPK4P31152 587 aa2.9□□□□□ -1.94
PRPF39-205ENST00000554081 CYP2C18P33260 490 aa2.9□□□□□ -1.94
PRPF39-205ENST00000554081 TM4SF4P48230 202 aa2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms