RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 LMBR1LQ6UX01 489 aa8.66□□□□□ -1.02
ATXN3-224ENST00000554040 LINC00114Q6XXX2 140 aa8.66□□□□□ -1.02
ATXN3-224ENST00000554040 GADL1Q6ZQY3 521 aa8.66□□□□□ -1.02
ATXN3-224ENST00000554040 NLRP8Q86W28 1048 aa8.66□□□□□ -1.02
ATXN3-224ENST00000554040 VPS37DQ86XT2 251 aa8.66□□□□□ -1.02
ATXN3-224ENST00000554040 ANKRD13CQ8N6S4 541 aa8.66□□□□□ -1.02
ATXN3-224ENST00000554040 SMCR8Q8TEV9 937 aaPredicted RBP8.66□□□□□ -1.02
ATXN3-224ENST00000554040 DNAAF4Q8WXU2 420 aa8.66□□□□□ -1.02
ATXN3-224ENST00000554040 SUGT1Q9Y2Z0 365 aa8.66□□□□□ -1.02
ATXN3-224ENST00000554040 PCDHGC4Q9Y5F7 938 aa8.66□□□□□ -1.02
ATXN3-224ENST00000554040 DOCK3Q8IZD9 2030 aa8.66□□□□□ -1.02
ATXN3-224ENST00000554040 ALPK3Q96L96 1907 aa8.65□□□□□ -1.02
ATXN3-224ENST00000554040 KRBA1A5PL33 1030 aa8.65□□□□□ -1.02
ATXN3-224ENST00000554040 FRAT2O75474 233 aaPredicted RBP8.65□□□□□ -1.02
ATXN3-224ENST00000554040 COL6A1P12109 1028 aa8.65□□□□□ -1.02
ATXN3-224ENST00000554040 PTPRAP18433 802 aa8.65□□□□□ -1.02
ATXN3-224ENST00000554040 TCP10Q12799 353 aa8.65□□□□□ -1.02
ATXN3-224ENST00000554040 WDR43Q15061 677 aaKnown RBP eCLIP8.65□□□□□ -1.02
ATXN3-224ENST00000554040 FAM110CQ1W6H9 321 aa8.65□□□□□ -1.02
ATXN3-224ENST00000554040 EPHA10Q5JZY3 1008 aa8.65□□□□□ -1.02
ATXN3-224ENST00000554040 PICK1Q9NRD5 415 aa8.65□□□□□ -1.02
ATXN3-224ENST00000554040 RAPGEFL1Q9UHV5 662 aa8.65□□□□□ -1.02
ATXN3-224ENST00000554040 KLF15Q9UIH9 416 aa8.65□□□□□ -1.02
ATXN3-224ENST00000554040 MYH3P11055 1940 aa8.64□□□□□ -1.03
ATXN3-224ENST00000554040 SPEF2Q9C093 1822 aa8.64□□□□□ -1.03
ATXN3-224ENST00000554040 MAST3O60307 1309 aa8.64□□□□□ -1.03
ATXN3-224ENST00000554040 A0A1W2PNR3 127 aa8.64□□□□□ -1.03
ATXN3-224ENST00000554040 MSTNO14793 375 aa8.64□□□□□ -1.03
ATXN3-224ENST00000554040 PLA2G5P39877 138 aa8.64□□□□□ -1.03
ATXN3-224ENST00000554040 TNP2Q05952 138 aa8.64□□□□□ -1.03
ATXN3-224ENST00000554040 NFIAQ12857 509 aa8.64□□□□□ -1.03
ATXN3-224ENST00000554040 FLIIQ13045 1269 aa8.64□□□□□ -1.03
ATXN3-224ENST00000554040 LRRC26Q2I0M4 334 aa8.64□□□□□ -1.03
ATXN3-224ENST00000554040 CAVIN4Q5BKX8 364 aa8.64□□□□□ -1.03
ATXN3-224ENST00000554040 MAP3K21Q5TCX8 1036 aa8.64□□□□□ -1.03
ATXN3-224ENST00000554040 FIGNL1Q6PIW4 674 aa8.64□□□□□ -1.03
ATXN3-224ENST00000554040 SCYL3Q8IZE3 742 aa8.64□□□□□ -1.03
ATXN3-224ENST00000554040 LBHD1Q9BQE6 289 aaPredicted RBP8.64□□□□□ -1.03
ATXN3-224ENST00000554040 PUS3Q9BZE2 481 aaKnown RBP8.64□□□□□ -1.03
ATXN3-224ENST00000554040 ATXN7O15265 892 aaPredicted RBP8.63□□□□□ -1.03
ATXN3-224ENST00000554040 ARAFP10398 606 aa8.63□□□□□ -1.03
ATXN3-224ENST00000554040 EPXP11678 715 aa8.63□□□□□ -1.03
ATXN3-224ENST00000554040 FKBP5Q13451 457 aaPredicted RBP8.63□□□□□ -1.03
ATXN3-224ENST00000554040 CDC42EP5Q6NZY7 148 aa8.63□□□□□ -1.03
ATXN3-224ENST00000554040 ZFPM1Q8IX07 1006 aa8.63□□□□□ -1.03
ATXN3-224ENST00000554040 ADAMTS19Q8TE59 1207 aa8.63□□□□□ -1.03
ATXN3-224ENST00000554040 ZDHHC1Q8WTX9 485 aa8.63□□□□□ -1.03
ATXN3-224ENST00000554040 MYLIPQ8WY64 445 aa8.63□□□□□ -1.03
ATXN3-224ENST00000554040 FAM122AQ96E09 287 aa8.63□□□□□ -1.03
ATXN3-224ENST00000554040 ZDHHC3Q9NYG2 299 aa8.63□□□□□ -1.03
ATXN3-224ENST00000554040 MKL2Q9ULH7 1088 aa8.63□□□□□ -1.03
ATXN3-224ENST00000554040 AGTPBP1Q9UPW5 1226 aa8.63□□□□□ -1.03
ATXN3-224ENST00000554040 COL2A1P02458 1487 aaPredicted RBP8.63□□□□□ -1.03
ATXN3-224ENST00000554040 ARAP2Q8WZ64 1704 aa8.63□□□□□ -1.03
ATXN3-224ENST00000554040 MROH5Q6ZUA9 1318 aa8.62□□□□□ -1.03
ATXN3-224ENST00000554040 TRIM75PA6NK02 468 aa8.62□□□□□ -1.03
ATXN3-224ENST00000554040 APAF1O14727 1248 aa8.62□□□□□ -1.03
ATXN3-224ENST00000554040 CTNND1O60716 968 aaKnown RBP8.62□□□□□ -1.03
ATXN3-224ENST00000554040 MAPTP10636 758 aaKnown RBP8.62□□□□□ -1.03
ATXN3-224ENST00000554040 SKIP12755 728 aa8.62□□□□□ -1.03
ATXN3-224ENST00000554040 CYP2B6P20813 491 aa8.62□□□□□ -1.03
ATXN3-224ENST00000554040 GCLCP48506 637 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-224ENST00000554040 EPHA4P54764 986 aa8.62□□□□□ -1.03
ATXN3-224ENST00000554040 TREML2Q5T2D2 321 aa8.62□□□□□ -1.03
ATXN3-224ENST00000554040 BEND3Q5T5X7 828 aa8.62□□□□□ -1.03
ATXN3-224ENST00000554040 TRIB2Q92519 343 aa8.62□□□□□ -1.03
ATXN3-224ENST00000554040 BTBD6Q96KE9 485 aa8.62□□□□□ -1.03
ATXN3-224ENST00000554040 TTYH1Q9H313 450 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-224ENST00000554040 SUV39H2Q9H5I1 410 aa8.62□□□□□ -1.03
ATXN3-224ENST00000554040 ZNF358Q9NW07 568 aa8.62□□□□□ -1.03
ATXN3-224ENST00000554040 DAGLAQ9Y4D2 1042 aa8.62□□□□□ -1.03
ATXN3-224ENST00000554040 DNAH12Q6ZR08 3092 aa8.62□□□□□ -1.03
ATXN3-224ENST00000554040 PIEZO1Q92508 2521 aa8.61□□□□□ -1.03
ATXN3-224ENST00000554040 DCDC2BA2VCK2 349 aa8.61□□□□□ -1.03
ATXN3-224ENST00000554040 XRCC5P13010 732 aaKnown RBP8.61□□□□□ -1.03
ATXN3-224ENST00000554040 FOSL2P15408 326 aa8.61□□□□□ -1.03
ATXN3-224ENST00000554040 CD33P20138 364 aa8.61□□□□□ -1.03
ATXN3-224ENST00000554040 SMAD3P84022 425 aaKnown RBP8.61□□□□□ -1.03
ATXN3-224ENST00000554040 NCOA4Q13772 614 aa8.61□□□□□ -1.03
ATXN3-224ENST00000554040 EML3Q32P44 896 aa8.61□□□□□ -1.03
ATXN3-224ENST00000554040 TWISTNBQ3B726 338 aaPredicted RBP8.61□□□□□ -1.03
ATXN3-224ENST00000554040 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.61□□□□□ -1.03
ATXN3-224ENST00000554040 USP40Q9NVE5 1235 aa8.61□□□□□ -1.03
ATXN3-224ENST00000554040 SCHIP1Q9P0W5 487 aaPredicted RBP8.61□□□□□ -1.03
ATXN3-224ENST00000554040 LRRFIP2Q9Y608 721 aaKnown RBP8.61□□□□□ -1.03
ATXN3-224ENST00000554040 ATRNL1Q5VV63 1379 aa8.61□□□□□ -1.03
ATXN3-224ENST00000554040 MGAMO43451 1857 aa8.6□□□□□ -1.03
ATXN3-224ENST00000554040 POM121CA8CG34 1229 aa8.6□□□□□ -1.03
ATXN3-224ENST00000554040 GRM8O00222 908 aa8.6□□□□□ -1.03
ATXN3-224ENST00000554040 PDE8BO95263 885 aa8.6□□□□□ -1.03
ATXN3-224ENST00000554040 TXLNAP40222 546 aa8.6□□□□□ -1.03
ATXN3-224ENST00000554040 DGKGP49619 791 aa8.6□□□□□ -1.03
ATXN3-224ENST00000554040 CACNB2Q08289 660 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-224ENST00000554040 SHHQ15465 462 aa8.6□□□□□ -1.03
ATXN3-224ENST00000554040 WDR66Q8TBY9 1149 aa8.6□□□□□ -1.03
ATXN3-224ENST00000554040 TSR2Q969E8 191 aaKnown RBP8.6□□□□□ -1.03
ATXN3-224ENST00000554040 SENP6Q9GZR1 1112 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-224ENST00000554040 PRKAG2Q9UGJ0 569 aa8.6□□□□□ -1.03
ATXN3-224ENST00000554040 NOD1Q9Y239 953 aa8.6□□□□□ -1.03
ATXN3-224ENST00000554040 MYBBP1AQ9BQG0 1328 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms