RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 FXR1P51114 621 aaKnown RBP eCLIP20.85■□□□□ 0.93
FOXN3-204ENST00000553840 IMMTQ16891 758 aaKnown RBP20.85■□□□□ 0.93
FOXN3-204ENST00000553840 LRRC26Q2I0M4 334 aa20.85■□□□□ 0.93
FOXN3-204ENST00000553840 CCDC178Q5BJE1 867 aa20.85■□□□□ 0.93
FOXN3-204ENST00000553840 TTC22Q5TAA0 569 aa20.85■□□□□ 0.93
FOXN3-204ENST00000553840 MAMDC4Q6UXC1 1216 aa20.85■□□□□ 0.93
FOXN3-204ENST00000553840 XPNPEP3Q9NQH7 507 aa20.85■□□□□ 0.93
FOXN3-204ENST00000553840 ALAS1P13196 640 aa20.84■□□□□ 0.93
FOXN3-204ENST00000553840 SYN1P17600 705 aa20.84■□□□□ 0.93
FOXN3-204ENST00000553840 CCDC174Q6PII3 467 aa20.84■□□□□ 0.93
FOXN3-204ENST00000553840 RNF180Q86T96 592 aa20.84■□□□□ 0.93
FOXN3-204ENST00000553840 IQCA1Q86XH1 822 aa20.84■□□□□ 0.93
FOXN3-204ENST00000553840 TBC1D10CQ8IV04 446 aa20.84■□□□□ 0.93
FOXN3-204ENST00000553840 AGBL1Q96MI9 1066 aa20.84■□□□□ 0.93
FOXN3-204ENST00000553840 TRERF1Q96PN7 1200 aa20.84■□□□□ 0.93
FOXN3-204ENST00000553840 PRO3102Q9H379 93 aa20.84■□□□□ 0.93
FOXN3-204ENST00000553840 RNF146Q9NTX7 359 aa20.84■□□□□ 0.93
FOXN3-204ENST00000553840 ZNF536O15090 1300 aa20.83■□□□□ 0.93
FOXN3-204ENST00000553840 ZNF865P0CJ78 1059 aaPredicted RBP20.83■□□□□ 0.93
FOXN3-204ENST00000553840 PDE4AP27815 886 aa20.83■□□□□ 0.93
FOXN3-204ENST00000553840 ATN1P54259 1190 aaPredicted RBP20.83■□□□□ 0.93
FOXN3-204ENST00000553840 LRRC41Q15345 812 aa20.83■□□□□ 0.93
FOXN3-204ENST00000553840 RUFY2Q8WXA3 655 aa20.83■□□□□ 0.93
FOXN3-204ENST00000553840 FAM184BQ9ULE4 1060 aa20.83■□□□□ 0.93
FOXN3-204ENST00000553840 POTEB2H3BUK9 544 aa20.82■□□□□ 0.92
FOXN3-204ENST00000553840 TAL1P17542 331 aaPredicted RBP20.82■□□□□ 0.92
FOXN3-204ENST00000553840 BMP8BP34820 402 aa20.82■□□□□ 0.92
FOXN3-204ENST00000553840 BTNL9Q6UXG8 535 aa20.82■□□□□ 0.92
FOXN3-204ENST00000553840 DGKHQ86XP1 1220 aa20.82■□□□□ 0.92
FOXN3-204ENST00000553840 ABHD16BQ9H3Z7 469 aa20.82■□□□□ 0.92
FOXN3-204ENST00000553840 PRKAG2Q9UGJ0 569 aa20.82■□□□□ 0.92
FOXN3-204ENST00000553840 ZHX1Q9UKY1 873 aaPredicted RBP20.82■□□□□ 0.92
FOXN3-204ENST00000553840 PNMA2Q9UL42 364 aa20.82■□□□□ 0.92
FOXN3-204ENST00000553840 CCPG1Q9ULG6 757 aa20.82■□□□□ 0.92
FOXN3-204ENST00000553840 NEDD4P46934 1319 aa20.81■□□□□ 0.92
FOXN3-204ENST00000553840 RAD50Q92878 1312 aa20.81■□□□□ 0.92
FOXN3-204ENST00000553840 MCM3APO60318 1980 aa20.81■□□□□ 0.92
FOXN3-204ENST00000553840 SNAI1O95863 264 aaPredicted RBP20.81■□□□□ 0.92
FOXN3-204ENST00000553840 ICAM1P05362 532 aa20.81■□□□□ 0.92
FOXN3-204ENST00000553840 SYDE2Q5VT97 1194 aa20.81■□□□□ 0.92
FOXN3-204ENST00000553840 GDF15Q99988 308 aa20.81■□□□□ 0.92
FOXN3-204ENST00000553840 KRT23Q9C075 422 aa20.81■□□□□ 0.92
FOXN3-204ENST00000553840 CNNM2Q9H8M5 875 aa20.81■□□□□ 0.92
FOXN3-204ENST00000553840 GPCPD1Q9NPB8 672 aa20.81■□□□□ 0.92
FOXN3-204ENST00000553840 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.81■□□□□ 0.92
FOXN3-204ENST00000553840 FRMPD2Q68DX3 1309 aaPredicted RBP20.8■□□□□ 0.92
FOXN3-204ENST00000553840 KDM4AO75164 1064 aa20.8■□□□□ 0.92
FOXN3-204ENST00000553840 PDHBP11177 359 aa20.8■□□□□ 0.92
FOXN3-204ENST00000553840 SLC16A2P36021 539 aa20.8■□□□□ 0.92
FOXN3-204ENST00000553840 ADCYAP1R1P41586 468 aa20.8■□□□□ 0.92
FOXN3-204ENST00000553840 SNAP25P60880 206 aa20.8■□□□□ 0.92
FOXN3-204ENST00000553840 ACVR2BQ13705 512 aa20.8■□□□□ 0.92
FOXN3-204ENST00000553840 TTBK2Q6IQ55 1244 aa20.8■□□□□ 0.92
FOXN3-204ENST00000553840 SLC39A5Q6ZMH5 540 aa20.8■□□□□ 0.92
FOXN3-204ENST00000553840 ARMCX2Q7L311 632 aa20.8■□□□□ 0.92
FOXN3-204ENST00000553840 RASGRP2Q7LDG7 609 aa20.8■□□□□ 0.92
FOXN3-204ENST00000553840 ZKSCAN3Q9BRR0 538 aa20.8■□□□□ 0.92
FOXN3-204ENST00000553840 RANBP17Q9H2T7 1088 aaKnown RBP20.8■□□□□ 0.92
FOXN3-204ENST00000553840 A1CFQ9NQ94 594 aaKnown RBP20.8■□□□□ 0.92
FOXN3-204ENST00000553840 TRIOBPQ9H2D6 2365 aa20.79■□□□□ 0.92
FOXN3-204ENST00000553840 ASB14A6NK59 587 aa20.79■□□□□ 0.92
FOXN3-204ENST00000553840 PGK1P00558 417 aa20.79■□□□□ 0.92
FOXN3-204ENST00000553840 GSPT1P15170 499 aaKnown RBP20.79■□□□□ 0.92
FOXN3-204ENST00000553840 RTP1P59025 263 aa20.79■□□□□ 0.92
FOXN3-204ENST00000553840 GPATCH4Q5T3I0 446 aaKnown RBP20.79■□□□□ 0.92
FOXN3-204ENST00000553840 FAM133AQ8N9E0 248 aa20.79■□□□□ 0.92
FOXN3-204ENST00000553840 SPC25Q9HBM1 224 aa20.79■□□□□ 0.92
FOXN3-204ENST00000553840 PCDH10Q9P2E7 1040 aa20.79■□□□□ 0.92
FOXN3-204ENST00000553840 ATP11BQ9Y2G3 1177 aa20.79■□□□□ 0.92
FOXN3-204ENST00000553840 B4E1Z4 1266 aa20.78■□□□□ 0.92
FOXN3-204ENST00000553840 MAGEA10P43363 369 aaPredicted RBP20.78■□□□□ 0.92
FOXN3-204ENST00000553840 ZNF543Q08ER8 600 aa20.78■□□□□ 0.92
FOXN3-204ENST00000553840 NSMFQ6X4W1 530 aa20.78■□□□□ 0.92
FOXN3-204ENST00000553840 CCDC144CPQ8IYA2 1237 aa20.78■□□□□ 0.92
FOXN3-204ENST00000553840 FERMT2Q96AC1 680 aa20.78■□□□□ 0.92
FOXN3-204ENST00000553840 ZSCAN10Q96SZ4 725 aaPredicted RBP20.78■□□□□ 0.92
FOXN3-204ENST00000553840 LBHD1Q9BQE6 289 aaPredicted RBP20.78■□□□□ 0.92
FOXN3-204ENST00000553840 KAT14Q9H8E8 782 aa20.78■□□□□ 0.92
FOXN3-204ENST00000553840 PHF24Q9UPV7 400 aa20.78■□□□□ 0.92
FOXN3-204ENST00000553840 DUSP11O75319 330 aaKnown RBP20.77■□□□□ 0.92
FOXN3-204ENST00000553840 SNHG28P0DPA3 235 aa20.77■□□□□ 0.92
FOXN3-204ENST00000553840 CNTN2Q02246 1040 aa20.77■□□□□ 0.92
FOXN3-204ENST00000553840 CCDC144BQ3MJ40 725 aa20.77■□□□□ 0.92
FOXN3-204ENST00000553840 PNMA1Q8ND90 353 aa20.77■□□□□ 0.92
FOXN3-204ENST00000553840 UBAC1Q9BSL1 405 aa20.77■□□□□ 0.92
FOXN3-204ENST00000553840 TSEN34Q9BSV6 310 aaKnown RBP20.77■□□□□ 0.92
FOXN3-204ENST00000553840 UBE2OQ9C0C9 1292 aaKnown RBP20.77■□□□□ 0.92
FOXN3-204ENST00000553840 TRDNQ13061 729 aa20.76■□□□□ 0.91
FOXN3-204ENST00000553840 SNX17Q15036 470 aa20.76■□□□□ 0.91
FOXN3-204ENST00000553840 MUM1L1Q5H9M0 696 aa20.76■□□□□ 0.91
FOXN3-204ENST00000553840 C1orf53Q5VUE5 145 aa20.76■□□□□ 0.91
FOXN3-204ENST00000553840 NUP133Q8WUM0 1156 aa20.76■□□□□ 0.91
FOXN3-204ENST00000553840 ANKS1AQ92625 1134 aa20.76■□□□□ 0.91
FOXN3-204ENST00000553840 FGD4Q96M96 766 aa20.76■□□□□ 0.91
FOXN3-204ENST00000553840 CYP39A1Q9NYL5 469 aa20.76■□□□□ 0.91
FOXN3-204ENST00000553840 ZSWIM5Q9P217 1185 aa20.76■□□□□ 0.91
FOXN3-204ENST00000553840 ADD3Q9UEY8 706 aaKnown RBP20.76■□□□□ 0.91
FOXN3-204ENST00000553840 SYNRGQ9UMZ2 1314 aa20.76■□□□□ 0.91
FOXN3-204ENST00000553840 ADAMTS4O75173 837 aa20.75■□□□□ 0.91
FOXN3-204ENST00000553840 CHMLP26374 656 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms