RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 C19orf47Q8N9M1 422 aaKnown RBP6.74□□□□□ -1.33
SCFD1-210ENST00000553693 KCNN1Q92952 543 aa6.74□□□□□ -1.33
SCFD1-210ENST00000553693 ZNF552Q9H707 407 aaPredicted RBP6.74□□□□□ -1.33
SCFD1-210ENST00000553693 KCNK12Q9HB15 430 aa6.74□□□□□ -1.33
SCFD1-210ENST00000553693 ZNF214Q9UL59 606 aaPredicted RBP6.74□□□□□ -1.33
SCFD1-210ENST00000553693 TEX51A0A1B0GUA7 166 aa6.73□□□□□ -1.33
SCFD1-210ENST00000553693 FADS2P1A8MWK0 482 aa6.73□□□□□ -1.33
SCFD1-210ENST00000553693 NPIPB6E9PJ23 425 aa6.73□□□□□ -1.33
SCFD1-210ENST00000553693 PNLIPP16233 465 aa6.73□□□□□ -1.33
SCFD1-210ENST00000553693 GJA8P48165 433 aa6.73□□□□□ -1.33
SCFD1-210ENST00000553693 KCNA10Q16322 511 aa6.73□□□□□ -1.33
SCFD1-210ENST00000553693 AXDND1Q5T1B0 1012 aaPredicted RBP6.73□□□□□ -1.33
SCFD1-210ENST00000553693 DCAF15Q66K64 600 aa6.73□□□□□ -1.33
SCFD1-210ENST00000553693 ZPBP2Q6X784 338 aa6.73□□□□□ -1.33
SCFD1-210ENST00000553693 SIRT2Q8IXJ6 389 aa6.73□□□□□ -1.33
SCFD1-210ENST00000553693 NAT16Q8N8M0 369 aa6.73□□□□□ -1.33
SCFD1-210ENST00000553693 C20orf173Q96LM9 149 aa6.73□□□□□ -1.33
SCFD1-210ENST00000553693 SRRTQ9BXP5 876 aaKnown RBP6.73□□□□□ -1.33
SCFD1-210ENST00000553693 PHAXQ9H814 394 aaKnown RBP6.73□□□□□ -1.33
SCFD1-210ENST00000553693 GP6Q9HCN6 339 aa6.73□□□□□ -1.33
SCFD1-210ENST00000553693 SF3B6Q9Y3B4 125 aaKnown RBP6.73□□□□□ -1.33
SCFD1-210ENST00000553693 A0A1W2PQ45 241 aaPredicted RBP6.72□□□□□ -1.33
SCFD1-210ENST00000553693 A0A1W2PQY0 241 aa6.72□□□□□ -1.33
SCFD1-210ENST00000553693 TP53P04637 393 aaPredicted RBP6.72□□□□□ -1.33
SCFD1-210ENST00000553693 ARL4AP40617 200 aa6.72□□□□□ -1.33
SCFD1-210ENST00000553693 GIPRP48546 466 aa6.72□□□□□ -1.33
SCFD1-210ENST00000553693 LAPTM5Q13571 262 aa6.72□□□□□ -1.33
SCFD1-210ENST00000553693 TCEAL1Q15170 157 aa6.72□□□□□ -1.33
SCFD1-210ENST00000553693 HSF5Q4G112 596 aaPredicted RBP6.72□□□□□ -1.33
SCFD1-210ENST00000553693 CIAPIN1Q6FI81 312 aa6.72□□□□□ -1.33
SCFD1-210ENST00000553693 TMEM132EQ6IEE7 984 aa6.72□□□□□ -1.33
SCFD1-210ENST00000553693 SLCO6A1Q86UG4 719 aa6.72□□□□□ -1.33
SCFD1-210ENST00000553693 FIBCD1Q8N539 461 aa6.72□□□□□ -1.33
SCFD1-210ENST00000553693 TGIF2Q9GZN2 237 aa6.72□□□□□ -1.33
SCFD1-210ENST00000553693 MCOLN1Q9GZU1 580 aa6.72□□□□□ -1.33
SCFD1-210ENST00000553693 AP5S1Q9NUS5 200 aa6.72□□□□□ -1.33
SCFD1-210ENST00000553693 KIAA1522Q9P206 1035 aaPredicted RBP6.72□□□□□ -1.33
SCFD1-210ENST00000553693 H0Y8X5 98 aa6.71□□□□□ -1.34
SCFD1-210ENST00000553693 GSTM1P09488 218 aa6.71□□□□□ -1.34
SCFD1-210ENST00000553693 CD247P20963 164 aa6.71□□□□□ -1.34
SCFD1-210ENST00000553693 NOP2P46087 812 aaKnown RBP6.71□□□□□ -1.34
SCFD1-210ENST00000553693 GALK1P51570 392 aa6.71□□□□□ -1.34
SCFD1-210ENST00000553693 ZNF445P59923 1031 aa6.71□□□□□ -1.34
SCFD1-210ENST00000553693 DLG4P78352 724 aa6.71□□□□□ -1.34
SCFD1-210ENST00000553693 CYP2R1Q6VVX0 501 aa6.71□□□□□ -1.34
SCFD1-210ENST00000553693 PLCD4Q9BRC7 762 aa6.71□□□□□ -1.34
SCFD1-210ENST00000553693 SLC12A9Q9BXP2 914 aa6.71□□□□□ -1.34
SCFD1-210ENST00000553693 GBP3Q9H0R5 595 aa6.71□□□□□ -1.34
SCFD1-210ENST00000553693 CCSER2Q9H7U1 834 aa6.71□□□□□ -1.34
SCFD1-210ENST00000553693 FAM86C1Q9NVL1 165 aa6.71□□□□□ -1.34
SCFD1-210ENST00000553693 SMG5Q9UPR3 1016 aaKnown RBP6.71□□□□□ -1.34
SCFD1-210ENST00000553693 A0A087WZG4 1122 aa6.7□□□□□ -1.34
SCFD1-210ENST00000553693 MYOCOSA0A1B0GUC4 107 aa6.7□□□□□ -1.34
SCFD1-210ENST00000553693 ABLIM1O14639 778 aa6.7□□□□□ -1.34
SCFD1-210ENST00000553693 EFEMP2O95967 443 aa6.7□□□□□ -1.34
SCFD1-210ENST00000553693 LINC00310P59036 64 aa6.7□□□□□ -1.34
SCFD1-210ENST00000553693 ERVFRD-1P60508 538 aa6.7□□□□□ -1.34
SCFD1-210ENST00000553693 TMEM62Q0P6H9 643 aa6.7□□□□□ -1.34
SCFD1-210ENST00000553693 GNPTABQ3T906 1256 aa6.7□□□□□ -1.34
SCFD1-210ENST00000553693 RTP2Q5QGT7 225 aa6.7□□□□□ -1.34
SCFD1-210ENST00000553693 C9orf131Q5VYM1 1079 aa6.7□□□□□ -1.34
SCFD1-210ENST00000553693 RGS22Q8NE09 1264 aa6.7□□□□□ -1.34
SCFD1-210ENST00000553693 CPLX3Q8WVH0 158 aa6.7□□□□□ -1.34
SCFD1-210ENST00000553693 SEC16BQ96JE7 1060 aa6.7□□□□□ -1.34
SCFD1-210ENST00000553693 HAUS7Q99871 368 aa6.7□□□□□ -1.34
SCFD1-210ENST00000553693 WHRNQ9P202 907 aa6.7□□□□□ -1.34
SCFD1-210ENST00000553693 STRIP2Q9ULQ0 834 aa6.7□□□□□ -1.34
SCFD1-210ENST00000553693 ZNF451Q9Y4E5 1061 aa6.7□□□□□ -1.34
SCFD1-210ENST00000553693 UNCXA6NJT0 531 aa6.69□□□□□ -1.34
SCFD1-210ENST00000553693 MPOP05164 745 aa6.69□□□□□ -1.34
SCFD1-210ENST00000553693 NASPP49321 788 aaPredicted RBP6.69□□□□□ -1.34
SCFD1-210ENST00000553693 SLC7A5Q01650 507 aa6.69□□□□□ -1.34
SCFD1-210ENST00000553693 POU4F1Q01851 419 aa6.69□□□□□ -1.34
SCFD1-210ENST00000553693 HLA-DQA1Q5Y7H0 255 aa6.69□□□□□ -1.34
SCFD1-210ENST00000553693 JAMLQ86YT9 394 aa6.69□□□□□ -1.34
SCFD1-210ENST00000553693 NUP43Q8NFH3 380 aa6.69□□□□□ -1.34
SCFD1-210ENST00000553693 BRF1Q92994 677 aa6.69□□□□□ -1.34
SCFD1-210ENST00000553693 NOL6Q9H6R4 1146 aaKnown RBP6.69□□□□□ -1.34
SCFD1-210ENST00000553693 INPP5FQ9Y2H2 1132 aa6.69□□□□□ -1.34
SCFD1-210ENST00000553693 CCDC9Q9Y3X0 531 aaKnown RBP6.69□□□□□ -1.34
SCFD1-210ENST00000553693 LTBP3Q9NS15 1303 aa6.69□□□□□ -1.34
SCFD1-210ENST00000553693 A0A1W2PQ27 194 aa6.68□□□□□ -1.34
SCFD1-210ENST00000553693 A0A1W2PQ64 194 aa6.68□□□□□ -1.34
SCFD1-210ENST00000553693 A0A1W2PQC6 194 aa6.68□□□□□ -1.34
SCFD1-210ENST00000553693 A0A1W2PQD8 194 aa6.68□□□□□ -1.34
SCFD1-210ENST00000553693 A0A1W2PQH9 124 aa6.68□□□□□ -1.34
SCFD1-210ENST00000553693 RFXAPO00287 272 aa6.68□□□□□ -1.34
SCFD1-210ENST00000553693 CBFA2T2O43439 604 aa6.68□□□□□ -1.34
SCFD1-210ENST00000553693 NUAK1O60285 661 aa6.68□□□□□ -1.34
SCFD1-210ENST00000553693 PRKCAP17252 672 aa6.68□□□□□ -1.34
SCFD1-210ENST00000553693 HOXA5P20719 270 aa6.68□□□□□ -1.34
SCFD1-210ENST00000553693 CYP4F8P98187 520 aa6.68□□□□□ -1.34
SCFD1-210ENST00000553693 HEATR6Q6AI08 1181 aaKnown RBP6.68□□□□□ -1.34
SCFD1-210ENST00000553693 ZDHHC15Q96MV8 337 aa6.68□□□□□ -1.34
SCFD1-210ENST00000553693 SIRT5Q9NXA8 310 aa6.68□□□□□ -1.34
SCFD1-210ENST00000553693 ACSL6Q9UKU0 697 aa6.68□□□□□ -1.34
SCFD1-210ENST00000553693 DIS3Q9Y2L1 958 aaKnown RBP6.68□□□□□ -1.34
SCFD1-210ENST00000553693 FGF10O15520 208 aaPredicted RBP6.67□□□□□ -1.34
SCFD1-210ENST00000553693 CD3EP07766 207 aa6.67□□□□□ -1.34
SCFD1-210ENST00000553693 YBX1P67809 324 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms